Contig 002377:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047B24Sequence620002377 (3)ref|XP_009593160.1|9e-61PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Nicotiana tome546005535 (3)ref|XP_011076106.1|1e-39PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950 [Sesamum indicum]
JMSF038D24Sequence710002377 (3)ref|XP_009593160.1|1e-81PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Nicotiana tome856005535 (3)ref|XP_011076106.1|1e-137PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950 [Sesamum indicum]
JMSF038L22Sequence623002377 (3)ref|XP_009593160.1|3e-59PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Nicotiana tome843005535 (3)ref|XP_011076106.1|4e-126PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950 [Sesamum indicum]

Alignment

This contig is upended


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JMSF038D24+                    TTTCACAGAAACGAGGCTGCAGCATCTCAAAGGTAAAAACCCCAGGAGAGG
                      ____________________________________________________________
consensus                      TTTCACAGAAACGAGGCTGCAGCATCTCAAAGGTAAAAACCCCAGGAGAGG
 
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JMFF047B24+                                        TCTGTGTTTTCATTGATTGCCTTGATAAACG
JMSF038D24+           GTTCAGACATTATATTTCGGAAACTGTCTTCTGTGTTTTCATTGATTGCCTTGATAAACG
JMSF038L22+                                                TTCATTGATTGCCNTGATAAACG
                      ____________________________________________________________
consensus             GTTCAGACATTATATTTCGGAAACTGTCTTCTGTGTTTTCATTGATTGCCTTGATAAACG
 
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JMFF047B24+           AGGGCAGAAAGAAATTTGCAGCATGCATAGTATACAGATCCCTGTGCAAAGGCTGATAGT
JMSF038D24+           AGGGCAGAAAGAAATTTGCAGCATGCATAGTATACAGATCCCTGTGCAAAGGCTGATAGT
JMSF038L22+           AGGGCAGAAAGAAATTTGCAGCATGCATAGTATACAGATCCCTGTGCAAAGGCTGATAGT
                      ____________________________________________________________
consensus             AGGGCAGAAAGAAATTTGCAGCATGCATAGTATACAGATCCCTGTGCAAAGGCTGATAGT
 
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JMFF047B24+           NTGATATAATCTTCTGCCTGTATTCTCTGTGCTTCTGGACGCGAGTTCGTTCGCCCTCCG
JMSF038D24+           TTGATATAATCTTCTGCCTGTATTCTCTGTGCTTCTGGACGCGAGTTCGTTCGCCCTCCG
JMSF038L22+           TTGATATAATCTTCTGCCTGTATTCTCTGTGCTTCTGGACGCGAGTTCGTTCGCCCTCCG
                      ____________________________________________________________
consensus             TTGATATAATCTTCTGCCTGTATTCTCTGTGCTTCTGGACGCGAGTTCGTTCGCCCTCCG
 
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JMFF047B24+           GGGAGTACCTGAGGAGAATTTCCCGCATGTACTGAACCTTAGAATCACGGTTGGAGTTGA
JMSF038D24+           GGGAGTACCTGAGGAGAATTTCCCGCATGTACTGAACCTTAGAATCACGGTTGGAGTTGA
JMSF038L22+           GGGAGTACCTGAGGAGAATTTCCCGCATGTACTGAACCTTAGAATCACGGTTGGAGTTGA
                      ____________________________________________________________
consensus             GGGAGTACCTGAGGAGAATTTCCCGCATGTACTGAACCTTAGAATCACGGTTGGAGTTGA
 
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JMFF047B24+           GGATGGTAGGCGGGAGATAGCGCTCCAGGGAGCTATACAGCAGCGGGCTGAAGTCCAATT
JMSF038D24+           GGATGGTAGGCGGGAGATAGCGCTCCAGGGAGCTATACAGCAGCGGGCTGAAGTCCAATT
JMSF038L22+           GGATGGTAGGCGGGAGATAGCGCTCCAGGGAGCTATACAGCAGCGGGCTGAAGTCCAATT
                      ____________________________________________________________
consensus             GGATGGTAGGCGGGAGATAGCGCTCCAGGGAGCTATACAGCAGCGGGCTGAAGTCCAATT
 
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JMFF047B24+           GCAGGTCGTCATAGCTGTCGGACTTATGGTCCATACTCGGGTTCAGCCTCAACCTGTGAG
JMSF038D24+           GCAGGTCGTCATAGCTGTCGGACTTATGGTCCATACTCGGGTTCAGCCTCAACCTGTGAG
JMSF038L22+           GCAGGTCGTCATAGCTGTCGGACTTATGGTCCATACTCGGGTTCAGCCTCAACCTGTGAG
                      ____________________________________________________________
consensus             GCAGGTCGTCATAGCTGTCGGACTTATGGTCCATACTCGGGTTCAGCCTCAACCTGTGAG
 
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JMFF047B24+           CAGTGTGAGTCTGGACAACGACGCCGTTCCCATTGCTCCCACTCCCATTCCCATTCCCGG
JMSF038D24+           CAGTGTGAGTCTGGACAACGACGCCGTTCCCATTGCTCCCACTCCCATTCCCATTCCCGG
JMSF038L22+           CAGTGTGAGTCTGGACAACGACGCCGTTCCCATTGCTCCCACTCCCATTCCCATTCCCGG
                      ____________________________________________________________
consensus             CAGTGTGAGTCTGGACAACGACGCCGTTCCCATTGCTCCCACTCCCATTCCCATTCCCGG
 
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JMFF047B24+           CGGCCGTTCCCTGGCGGTCCTTGTCCCGATCCACTGCGGCCCCATCGAGAGACATCTGTG
JMSF038D24+           CGGCCGTTCCCTGGCGGTCCTTGTCCCGATCCACTGCGGCCCCATCGAGAGACATCTGTG
JMSF038L22+           CGGCCGTTCCCTGGCGGTCCTTGTCCCGATCCACTGCGGCCCCATCGAGAGACATCTGTG
                      ____________________________________________________________
consensus             CGGCCGTTCCCTGGCGGTCCTTGTCCCGATCCACTGCGGCCCCATCGAGAGACATCTGTG
 
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JMFF047B24+           TAGATAGAGAACTCTGCGTATACGTATAGAGAGAGAGAGTCACGGTATGTGTATATCTAG
JMSF038D24+           TAGATAGAGAACTCTGCGTATACGTATAGAGAGAGAGAGTCACGGTATGTGTATATCTAG
JMSF038L22+           TAGATAGAGAACTCTGCGTATACGTATAGAGAGAGAGAGTCACGGTATGTGTATATCTAG
                      ____________________________________________________________
consensus             TAGATAGAGAACTCTGCGTATACGTATAGAGAGAGAGAGTCACGGTATGTGTATATCTAG
 
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JMFF047B24+           AGAGATAAGGTTGATGTCAATGAGGTGAGTAGTATGACATGTTCGAAGGGAATGGATTTT
JMSF038D24+           AGAGATAAGGTTGATGTCAATGAGGTGAGTAGTATGACATGTTCGAAGGGAATGGATTTT
JMSF038L22+           AGAGATAAGGTTGATGTCAATGAGGTGAGTAGTATGACATGTTCGAAGGGAATGGATTTT
                      ____________________________________________________________
consensus             AGAGATAAGGTTGATGTCAATGAGGTGAGTAGTATGACATGTTCGAAGGGAATGGATTTT
 
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JMFF047B24+           TAGGGTTTCAGGTTGGTTTGTTGTTGGTGAAGATGAAGGTTAGGGTTTG           
JMSF038D24+           TAGGGTTTCAAGTTGGTTTGTTGTTGGTGAAGATGAAGGTTAGGGTTTGGTGTTTTAC  
JMSF038L22+           TAGGGTTTCAGGTTGGTTTGTTGTTGGTGAAGATGAAGGTTAGGGTTTGGTGTTTTACCC
                      ____________________________________________________________
consensus             TAGGGTTTCAGGTTGGTTTGTTGTTGGTGAAGATGAAGGTTAGGGTTTGGTGTTTTACCC