Contig 002375:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009H12Sequence264002375 (3)gb|ACF17651.1|4e-27putative enoyl-acyl-carrier-protein reductase [Capsicum annuum]811024482ref|XP_011080315.1|2e-120PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like, p
JMSF038K03Sequence231002375 (3)931007266 (3)ref|XP_010102544.1|1e-34hypothetical protein L484_018015 [Morus notabilis] gb|EXB93630.1| hypothetical p
JMSF048L19Sequence566002375 (3)emb|CAA74177.1|2e-27enoyl-ACP reductase [Nicotiana tabacum]

Alignment

This contig is upended


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JMSF048L19+                                             TTTCAAAAATGTTTAAGGCAGGTANN
                      ____________________________________________________________
consensus                                               TTTCAAAAATGTTTAAGGCAGGTANN
 
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JMSF009H12+                                                      TTGCTATAGCCCAGCCA
JMSF048L19+           CAGGTTCCAACTAGAATTTCTGCACNTGCAGCAGCCAAGGACTTTGCTATAGCCCAGCCA
                      ____________________________________________________________
consensus             CAGGTTCCAACTAGAATTTCTGCACNTGCAGCAGCCAAGGACTTTGCTATAGCCCAGCCA
 
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JMSF009H12+           TATCCATTGTCATCTGCTACGCCAGCTATAAATGCCCTTTTACCTTTCAAATTTATTGGC
JMSF048L19+           TATCCATTGTCATGTGNTACGCCAGCTATAAATGCCCTTTTACCTTTCAAANTTATNGGC
                      ____________________________________________________________
consensus             TATCCATTGTCATGTGCTACGCCAGCTATAAATGCCCTTTTACCTTTCAAATTTATTGGC
 
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JMSF009H12+           AAACCAGTAACAGGCTTGCTTTCATCACATTCCAATTTTGCCCTAGTTACACCTTTTCCA
JMSF048L19+           AAACCAGTAACAGGCTTGCTTTCATCACATTCCAATTTTGCCCTAGTTACACCTTTTCCA
                      ____________________________________________________________
consensus             AAACCAGTAACAGGCTTGCTTTCATCACATTCCAATTTTGCCCTAGTTACACCTTTTCCA
 
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JMSF009H12+           AATGTTGGAGATGCTGATGTGAAAGAA-CGATGCAAATGCCGTATAGATGATACATGATG
JMSF048L19+           AATGTTGGAGATGCTGATGTGAAAGAANCGATGCAAATTCNGTATAGATGATNCATGATG
                      ____________________________________________________________
consensus             AATGTTGGAGATGCTGATGTGAAAGAANCGATGCAAATTCCGTATAGATGATACATGATG
 
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JMSF009H12+           AGTACTGGCAAGCCTATTCCATGACACCTCTTTAGCATCAGCATTCGAGCACCCACTAAA
JMSF048L19+           AGTACTGGCAAGCCTATTCCATGACACCTCTTTAGCATCAGCATTCGAGCACCCACTAAA
                      ____________________________________________________________
consensus             AGTACTGGCAAGCCTATTCCATGACACCTCTTTAGCATCAGCATTCGAGCACCCACTAAA
 
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JMSF009H12+           GATTC                                                       
JMSF048L19+           GATTCTCCGAGTAGAGAAAATAGAGGGCCTTGCTACAGTAGTTTGCAAGAAGGAAGTCAC
JMSF038K03+                   GAGTAGAGAAAATAGAGGGCCNTGNTACAGTAGTTTGCAAGAAGGAAGTCAC
                      ____________________________________________________________
consensus             GATTCTCCGAGTAGAGAAAATAGAGGGCCTTGCTACAGTAGTTTGCAAGAAGGAAGTCAC
 
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JMSF048L19+           ANCTGNTGCCANTGCAGAGATTAATGAAAACCTCTGGATTGCTGAGAGAAGAGCAATGGG
JMSF038K03+           ANCTGCTGCCATTGCAGAGATTAATGAAAACCTCTGGATTGCTGAGAGAAGAGCAATGGG
                      ____________________________________________________________
consensus             ANCTGCTGCCATTGCAGAGATTAATGAAAACCTCTGGATTGCTGAGAGAAGAGCAATGGG
 
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JMSF048L19+           AGGTTTCAATTTGATTATGGAAATTTTATTGATCCGGCTAAAAANTNGTGTGTTCTGTTT
JMSF038K03+           AGGTTTCAATTTGATTATGGAAATTTTATTGATCCGGCTAAAAAATTGTGTGTTCTGTTT
                      ____________________________________________________________
consensus             AGGTTTCAATTTGATTATGGAAATTTTATTGATCCGGCTAAAAAATTGTGTGTTCTGTTT
 
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JMSF048L19+           GTAGCACACGCAGTGGTGGAAGTAGCAGGGTAAATGAACAGAGGGAAGGAAAAGAGAAG 
JMSF038K03+           GTAGCACA-GCAGTGGTGGAAGTAGCAGGGTAANTGAACAGAGGGAAGGAAAAGAGAAGG
                      ____________________________________________________________
consensus             GTAGCACACGCAGTGGTGGAAGTAGCAGGGTAAATGAACAGAGGGAAGGAAAAGAGAAGG