Contig 002373:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018M17Sequence457002373 (4)270002942 (2)
JMFS086F08Sequence593002373 (4)ref|XP_006363966.1|5e-10PREDICTED: uncharacterized protein LOC102593551 isoform X1 [Solanum tuberosum]
JMSF023B15Sequence696002373 (4)ref|XP_006363966.1|4e-16PREDICTED: uncharacterized protein LOC102593551 isoform X1 [Solanum tuberosum] 230024564
JMSF038G02Sequence711002373 (4)ref|XP_006363966.1|1e-05PREDICTED: uncharacterized protein LOC102593551 isoform X1 [Solanum tuberosum] 897002942 (2)ref|XP_011083401.1|4e-103PREDICTED: uncharacterized protein LOC105165931 isoform X2 [Sesamum indicum]

Alignment

This contig is upended


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JMSF023B15+                                                     GGTCCTTCAAGACATCCC
                      ____________________________________________________________
consensus                                                       GGTCCTTCAAGACATCCC
 
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JMFS086F08+                                                        GACCAATGTGCACCC
JMSF023B15+           TCGATGAAGTGCAAGCAAAATCTGTGGTTGNTCTACTGCTTACNTGACCAATGTGCACCC
                      ____________________________________________________________
consensus             TCGATGAAGTGCAAGCAAAATCTGTGGTTGNTCTACTGCTTACNTGACCAATGTGCACCC
 
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JMFS086F08+           CAGTCATATCACAGTTGCTTGCAGCTACAAACCTAGCTGGAGTTTGTGCAAATGTGCTCA
JMSF023B15+           CAGTCATATCACAGTTGCTTGCAGCTACAAACCTAGCTGGAGTTTGTGCAAATGTGCTCA
JMSF038G02+                    CACAGTTGCTTGCAGCTACAAACCTAGCTGGAGTTTGTGCAAATGTGCTCA
                      ____________________________________________________________
consensus             CAGTCATATCACAGTTGCTTGCAGCTACAAACCTAGCTGGAGTTTGTGCAAATGTGCTCA
 
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JMFS086F08+           AGGATGTAGCAACTTCCTCAGCATAATTATTAGTTGCTACTTGAGGCACACCCATGTCTG
JMSF023B15+           AGGATGTAGCAACTTCCTCAGCATAATTATTAGTTGCTACTTGAGGCACACCCATGTCTG
JMSF038G02+           AGGATGTAGCAACTTCCTCAGCATAATTATTAGTTGCTACCTGAGGCACACCCATGTCTG
                      ____________________________________________________________
consensus             AGGATGTAGCAACTTCCTCAGCATAATTATTAGTTGCTACTTGAGGCACACCCATGTCTG
 
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JMFS086F08+           CACTAGATTTTTCCTCAAATTATTTTCCTAAGAACCTTACCCTATCCACTAGAATAGCTA
JMSF023B15+           CACTAGATTTTTCCTCAAATTATTTTCCTAAGAACCTTACCCTATCCACTAGAATAGCTA
JMFF018M17+                                                     TATCCACTAGAATAGCTA
JMSF038G02+           CACTAGATTTTTCCTCAAATTATTTTCCTAAGAACCTTACCCTATCCACTAGAATAGCTA
                      ____________________________________________________________
consensus             CACTAGATTTTTCCTCAAATTATTTTCCTAAGAACCTTACCCTATCCACTAGAATAGCTA
 
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JMFS086F08+           CTCTTTAGCACTTATCTTATAATATTTTCATTGTCCCATGTAAAATCTGAGTTGCTCCAA
JMSF023B15+           CTCTTTAGCACTTATCTTATAATATTTTCATTGTCCCATGTAAAATCTGAGTTGCTCCAA
JMFF018M17+           CTCTTTAGCACTTATCTTATAATATTTTCATTGTCCCATGTAAAATCTGAGTTGCTCCAA
JMSF038G02+           CTCTTTAGCACTTATCTTATAATATTTTCATTGTCCCATGTAAAATCTGAGTTGCTCCAA
                      ____________________________________________________________
consensus             CTCTTTAGCACTTATCTTATAATATTTTCATTGTCCCATGTAAAATCTGAGTTGCTCCAA
 
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JMFS086F08+           CCTATCACTAACAGAAATGAAGGATCCAACTAGCTACAGCTCAATCTGCATCAACTAGAG
JMSF023B15+           CCTATCACTAACAGAAATGAAGGATCCAACTAGCTACAGCTCAATCTGCATCAACTAGAG
JMFF018M17+           CCTATCACTAACAGAAATGAAGGATCCAACTAGCTACAGCTCAATCTGCATCAACTAGAG
JMSF038G02+           CCTATCACTAACAGAAATGAAGGATCCAACTAGCTACAGCTCAATCTGCATCAACTAGAG
                      ____________________________________________________________
consensus             CCTATCACTAACAGAAATGAAGGATCCAACTAGCTACAGCTCAATCTGCATCAACTAGAG
 
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JMFS086F08+           GCGCTCATACAGAAGTGTAATATGCCTAACTGGCCTTCATTTCTATCAGTATTTCGCACC
JMSF023B15+           GCGCTCATACAGAAGTGTAATATGCCTAACTGGCCTTCATTTCTATCAGTATTTCGCACC
JMFF018M17+           GCGCTCATACAGAAGTGTAATATGCCTAACTGGCCTTCATTTCTATCAGTATTTCGCACC
JMSF038G02+           GCGCTCATACAGAAGTGTAATATGCCTAACTGGCCTTCATTTCTATCAGTATTTCGCACC
                      ____________________________________________________________
consensus             GCGCTCATACAGAAGTGTAATATGCCTAACTGGCCTTCATTTCTATCAGTATTTCGCACC
 
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JMFS086F08+           AGTATCTACC                                                  
JMSF023B15+           AGTATCTACCTCTGCCTTTGTAACAAGAAATCATAAATCATTCCACAAGATGAAGTGAAA
JMFF018M17+           AGTATCTACCTCTGCCTTTGTAACAAGAAATCATAAATCATTCCACAAGATGAAGTGAAA
JMSF038G02+           AGTATCTACCTCTGCCTTTGTAACAAGAAATCATAAATCATTCCACAAGATGAAGTGAAA
                      ____________________________________________________________
consensus             AGTATCTACCTCTGCCTTTGTAACAAGAAATCATAAATCATTCCACAAGATGAAGTGAAA
 
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JMSF023B15+           TCCAGTAAATCTTCTCCGGATCAACATCTTCTACAACAACAGTCTACGGCAAATTGAAGC
JMFF018M17+           TCCAGTAAATCTTCTCCGGATCAACATCTTCTACAACAACAGTCTACGGCAAATTGAAGC
JMSF038G02+           TCCAGTAAATCTTCTCCGGATCAACATCTTCTACAACAACAGTCTACGGCAAATTGAAGC
                      ____________________________________________________________
consensus             TCCAGTAAATCTTCTCCGGATCAACATCTTCTACAACAACAGTCTACGGCAAATTGAAGC
 
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JMSF023B15+           AATAATAACAATTATCAGATGCATATATATGTATATAATATATGCACAGAAACAGAAATT
JMFF018M17+           AATAATAACAATTATCAGATGCATATATATGTATATAATATATGCACAGAAACAGAAATT
JMSF038G02+           AATAATAACAATTATCAGATGCATATATATGTATATAATATATGCACAGAAACAGAAATT
                      ____________________________________________________________
consensus             AATAATAACAATTATCAGATGCATATATATGTATATAATATATGCACAGAAACAGAAATT
 
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JMSF023B15+           TCTACGGACTACGAAAAGAAAATATAAATAAATTACGGAGTATATTATCAATCAAATATT
JMFF018M17+           TCTACGGACTACGAAAAGAAAATATAAATAAATTACGGAGTATATTATCAATCAAATATT
JMSF038G02+           TCTACGGACTACGAAAAGAAAATATAAATAAATTACGGAGTATATTATCAATCAAATATT
                      ____________________________________________________________
consensus             TCTACGGACTACGAAAAGAAAATATAAATAAATTACGGAGTATATTATCAATCAAATATT
 
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JMSF023B15+           TCCTCTATCTCTCT                                              
JMFF018M17+           TCCTCTATCTCTCT                                              
JMSF038G02+           TCCTCTATCTCTCTTCTATGGTTATTTGTTTATCTTTTGGGGTTTAATAATATTTTTGCA
                      ____________________________________________________________
consensus             TCCTCTATCTCTCTTCTATGGTTATTTGTTTATCTTTTGGGGTTTAATAATATTTTTGCA
 
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JMSF038G02+           GAAAGGAGGATATGGATTGGGTATGGTGCCACGATGGTACCAGAACAATACGCCACCCCC
                      ____________________________________________________________
consensus             GAAAGGAGGATATGGATTGGGTATGGTGCCACGATGGTACCAGAACAATACGCCACCCCC