Contig 002372:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001J04Sequence235002372 (3)771024440ref|XP_009617477.1|9e-56PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Nicotiana to
JMSF038F05Sequence686002372 (3)ref|XP_009626038.1|1e-34PREDICTED: putative receptor-like protein kinase At4g00960 [Nicotiana tomentosi900001466 (3)ref|XP_009617477.1|3e-103PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Nicotiana to
JMSF044F14Sequence811002372 (3)ref|XP_009785802.1|2e-51PREDICTED: putative receptor-like protein kinase At4g00960 isoform X2 [Nicotian793001466 (3)ref|XP_009617477.1|3e-89PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Nicotiana to

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+                                    CTATAGACCCTCGCCTACCATAGCACGGACATTGA
                      ____________________________________________________________
consensus                                      CTATAGACCCTCGCCTACCATAGCACGGACATTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           GGCAGTTTTTCAATAATACTAACCAAGCAATCAGAGCAACCTTGAGCAGCCAACTCAGGT
                      ____________________________________________________________
consensus             GGCAGTTTTTCAATAATACTAACCAAGCAATCAGAGCAACCTTGAGCAGCCAACTCAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           GAGCACTGCACAGCTGCATATATGGTCTCAGAGTCCGGCCCAGATATATTCCCTGCCGCA
JMSF038F05+                                             CCGGCCCAGATATATTCCCTGCCGCA
                      ____________________________________________________________
consensus             GAGCACTGCACAGCTGCATATATGGTCTCAGAGTCCGGCCCAGATATATTCCCTGCCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           AACTTAAGCAACGGGCTACCATTTGCAGCACGATCTCGTAGACCCTCCAGCAATTTCCAC
JMSF038F05+           AACTTAAGCAACGGGCTACCATTTGCAGCACGATCTCGTAGACCCTCCAGCAATTTCCAC
                      ____________________________________________________________
consensus             AACTTAAGCAACGGGCTACCATTTGCAGCACGATCTCGTAGACCCTCCAGCAATTTCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           ACATCTTTCTTAAACTCGTCTTGGTTCGAAGCATTATATCTATTCCTCAAGAAAACTGGA
JMSF038F05+           ACATCTTTCTTAAACTCGTCTTGGTTCGAAGCATTATATCTATTCCTCAAGAAAACTGGA
                      ____________________________________________________________
consensus             ACATCTTTCTTAAACTCGTCTTGGTTCGAAGCATTATATCTATTCCTCAAGAAAACTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           GGACTACTGGAATACCAGTTTCCTAGGGTGGGCGCGTCGGAGTATCGGATCTTGCACTTA
JMSF038F05+           GGACTACTGGAATACCAGTTTCCTAGGGTGGGCGCGTCGGAGTATCGGATCTTGCACTTA
                      ____________________________________________________________
consensus             GGACTACTGGAATACCAGTTTCCTAGGGTGGGCGCGTCGGAGTATCGGATCTTGCACTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           TCGTACCCTCCAAATGCCTCTATCTGATTCGGGCAATTCTGTAGCGTCAACCTAGCGGCA
JMSF038F05+           TCGTACCCTCCAAATGCCTCTATCTGATTCGGGCAATTCTGTAGCGTCAACCTAGCGGCA
                      ____________________________________________________________
consensus             TCGTACCCTCCAAATGCCTCTATCTGATTCGGGCAATTCTGTAGCGTCAACCTAGCGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           TCTTCAATGCAACTGCGACATATGTCGGCCTCAACGACGTCGCCGCGGCATACCCCCACC
JMSF038F05+           TCTTCAATGCAACTGCGACATATGTCGGCCTCAACGACGTCGCCGCGGCATACCCCCACC
                      ____________________________________________________________
consensus             TCTTCAATGCAACTGCGACATATGTCGGCCTCAACGACGTCGCCGCGGCATACCCCCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           GCATTCACTCTGTTGGGGGTTTTGCCCATGGAAACGTAGCAGAATCCATATTTATTGAGT
JMSF038F05+           GCATTCACTCTGTTGGGGGTTTTGCCCATGGAAACGTAGCAGAATCCATATTTATTGAGT
                      ____________________________________________________________
consensus             GCATTCACTCTGTTGGGGGTTTTGCCCATGGAAACGTAGCAGAATCCATATTTATTGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           TTAGACGGGAGGGAGGAGAGAAGTGAGTTAAGGTTTGTTCCGTAGATGCTGTTTTCTGTG
JMSF038F05+           TTAGACGGGAGGGAGGAGAGAAGTGAGTTAAGGTTTGTTCCGTAGATGCTGTTTTCTGTG
                      ____________________________________________________________
consensus             TTAGACGGGAGGGAGGAGAGAAGTGAGTTAAGGTTTGTTCCGTAGATGCTGTTTTCTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           TAGTTTCCAGTTAGGCCGCAGGATGCGTACGGGTGGTCATCGGACTGTGCTACCGCTGAC
JMSF001J04+                TCCAGTTAGGCCGCAGGATGCGTACGGGTGGTCATCGGACTGTGCTACCGCTGAC
JMSF038F05+           TAGTTTCCAGTTAGGCCGCAGGATGCGTACGGGTGGTCATCGGACTGTGCTACCGCTGAC
                      ____________________________________________________________
consensus             TAGTTTCCAGTTAGGCCGCAGGATGCGTACGGGTGGTCATCGGACTGTGCTACCGCTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           AGGATGATGAAAGTAGAAAGGTATAGGAAAACCACACATTTCTGCAAATCCATATATGCG
JMSF001J04+           AGGATGATGAAAGTAGAAAGGTATAGGAAAACCACACATTTCTGCAAATCCATATATGCG
JMSF038F05+           AGGATGATGAAAGTAGAAAGGTATAGGAAAACCACACATTTCTGCAAATCCATATATGCG
                      ____________________________________________________________
consensus             AGGATGATGAAAGTAGAAAGGTATAGGAAAACCACACATTTCTGCAAATCCATATATGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           TGCCTTCAAACTCACAAATTAAATAATATATATGCTGTATGTTTTGGCCGGGTTAATAGA
JMSF001J04+           TGCCTTCAAACTCACAAATTAAATAATATATATGCTGTATGTTTTGGCCGGATTAATAGA
JMSF038F05+           TGCCTTCAAACTCACAAATTAAATAATATATATGCTGTATGTTTTGGCCGGATTAATAGA
                      ____________________________________________________________
consensus             TGCCTTCAAACTCACAAATTAAATAATATATATGCTGTATGTTTTGGCCGGATTAATAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F14+           GTTATACACTCATTTTACTCTGATCTGGGAACTGGGGAACAAGTAGTGGATGCCC     
JMSF001J04+           GTTATACACTCATTTTACTCTGATCTGGGAACTGGGGAACAAGTAGTGGATGCCC     
JMSF038F05+           GTTATACACTCATTTTACTCTGATCTGGGAACTGGGGAACAAGTAGTGGATGCCCAATTC
                      ____________________________________________________________
consensus             GTTATACACTCATTTTACTCTGATCTGGGAACTGGGGAACAAGTAGTGGATGCCCAATTC