| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF013B22 | Sequence | 478 | 002368 (5) | 747 | 002970 (5) | ||||||
| JMSF017C20 | Sequence | 493 | 002368 (5) | ref|XP_009622340.1| | 7e-05 | PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Nicotiana tomentosi | 734 | 002970 (5) | ref|XP_006365314.1| | 5e-19 | PREDICTED: probable galacturonosyltransferase 7-like isoform X1 [Solanum tubero |
| JMSF024G17 | Sequence | 651 | 002368 (5) | ref|XP_009622342.1| | 3e-17 | PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Nicotiana tomentosi | 709 | 002970 (5) | ref|XP_006365314.1| | 2e-15 | PREDICTED: probable galacturonosyltransferase 7-like isoform X1 [Solanum tubero |
| JMSF038B05 | Sequence | 702 | 002368 (5) | ref|XP_009622342.1| | 4e-17 | PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Nicotiana tomentosi | 899 | 002970 (5) | ref|XP_009622342.1| | 3e-40 | PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Nicotiana tomentosi |
| JMSF044D16 | Sequence | 745 | 002368 (5) | ref|XP_009622342.1| | 7e-29 | PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Nicotiana tomentosi | 778 | 002970 (5) | gb|KHN29456.1| | 3e-09 | Putative galacturonosyltransferase 7 [Glycine soja] |
This contig is upended
. : . : . : . : . : . :
JMSF044D16+ TCTCACAAAGAAATCATTCACTTGCTCTGTATGCTCTCGATGCCATGTGCAG
____________________________________________________________
consensus TCTCACAAAGAAATCATTCACTTGCTCTGTATGCTCTCGATGCCATGTGCAG
. : . : . : . : . : . :
JMSF044D16+ TAGCTCCCAAATTTTAAATCACACATATTAGAACTCATCTCAGCTTCTATTTTGTCAGCA
____________________________________________________________
consensus TAGCTCCCAAATTTTAAATCACACATATTAGAACTCATCTCAGCTTCTATTTTGTCAGCA
. : . : . : . : . : . :
JMSF044D16+ GAATCCATATTGCCAACTTTTATGCTATTTGCTTTTGGCAGTTCTTTAGGCATTCCAACT
JMSF024G17+ TTATGCTATTTGCTTTTGGCAGTTCTTTAGGCATTCCAACT
JMSF038B05+ TTATGCTATTTGCTTTTGGCAGTTCTTTAGGCATTCCAACT
____________________________________________________________
consensus GAATCCATATTGCCAACTTTTATGCTATTTGCTTTTGGCAGTTCTTTAGGCATTCCAACT
. : . : . : . : . : . :
JMSF044D16+ GGCAATGGAGAACCTTTAGTCTCATTCTTAGTTTCCTTGTCAATGTTCTTCTGAAAATCC
JMSF024G17+ GGCAATGGAGAACCTTTAGTCTCATTCTTAGTTTCCTTGTCAATGTTCTTCTGAAAATCC
JMSF038B05+ GGCAATGGAGAACCTTTAGTCTCATTCTTAGTTTCCTTGTCAATGTTCTTCTGAAAATCC
____________________________________________________________
consensus GGCAATGGAGAACCTTTAGTCTCATTCTTAGTTTCCTTGTCAATGTTCTTCTGAAAATCC
. : . : . : . : . : . :
JMSF017C20+ CGCTTCTTGTAATATCATCTACATGCCTTGATTTATCACCC
JMSF044D16+ TTTGGAAAAGTTGGTCCCACGCTTCTTGTAATATCATCTACATGCCTTGATTTATCACCC
JMSF024G17+ TTTGGAAAAGTTGGTCCCACGCTTCTTGTAATATCATCTACATGCCTTGATTTATCACCC
JMSF038B05+ TTTGGAAAAGTTGGTCCCACGCTTCTTGTAATATCATCTACATGCCTTGATTTATCACCC
____________________________________________________________
consensus TTTGGAAAAGTTGGTCCCACGCTTCTTGTAATATCATCTACATGCCTTGATTTATCACCC
. : . : . : . : . : . :
JMSF017C20+ TCCAATTGTTCCCCAGTCAAGAGATCCTCATTTTGACCATTAACTCTAGCCACATTAGAA
JMSF044D16+ TCCAATTGTTCCCCAGTCAAGAGATCCTCATTTTGACCATTAACTCTAGCCACATTAGAA
JMSF024G17+ TCCAATTGTTCCCCAGTCAAGAGATCCTCATTTTGACCATTAACTCTAGCCACATTAGAA
JMSF013B22+ CCAGTCAAGAGATCCTCATTTTGACCATTAACTCTAGCCACATTAGAA
JMSF038B05+ TCCAATTGTTCCCCAGTCAAGAGATCCTCATTTTGACCATTAACTCTAGCCACATTAGAA
____________________________________________________________
consensus TCCAATTGTTCCCCAGTCAAGAGATCCTCATTTTGACCATTAACTCTAGCCACATTAGAA
. : . : . : . : . : . :
JMSF017C20+ GAAGAACTTTGATGTTCAGACGCAAGTCCTGAGGAAGACTGGAAACTATTGTTCTGGCCA
JMSF044D16+ GAAGAACTTTGATGTTCAGACGCAAGTCCTGAGGAAGACTGGAAACTATTGTTCTGGCCA
JMSF024G17+ GAAGAACTTTGATGTTCAGACGCAAGTCCTGAGGAAGACTGGAAACTATTGTTCTGGCCA
JMSF013B22+ GAAGAACTTTGATGTTCAGACGCAAGTCCTGAGGAAGACTGGAAACTATTGTTCTGGCCA
JMSF038B05+ GAAGAACTTTGATGTTCAGACGCAAGTCCTGAGGAAGACTGGAAACTATTGTTCTGGCCA
____________________________________________________________
consensus GAAGAACTTTGATGTTCAGACGCAAGTCCTGAGGAAGACTGGAAACTATTGTTCTGGCCA
. : . : . : . : . : . :
JMSF017C20+ AGCAAGAAGACGACGGGAACCAGCATCGAAAGTAACACAAGACTTAACACCGCAATCACC
JMSF044D16+ AGCAAGAAGACGACGGGAACCAGCATCGAAAGTAACACAAGACTTAACACCGCAATCACC
JMSF024G17+ AGCAAGAAGACGACGGGAACCAGCATCGAAAGTAACACAAGACTTAACACCGCAATCACC
JMSF013B22+ AGCAAGAAGACGACGGGAACCAGCATCGAAAGTAACACAAGACTTAACACCGCAATCACC
JMSF038B05+ AGCAAGAAGACGACGGGAACCAGCATCGAAAGTAACACAAGACTTAACACCGCAATCACC
____________________________________________________________
consensus AGCAAGAAGACGACGGGAACCAGCATCGAAAGTAACACAAGACTTAACACCGCAATCACC
. : . : . : . : . : . :
JMSF017C20+ AGACCTTTCCATCGCTTCTTAACCACCGGAACAGCATTAGACTGACCTCCAACAGCCCCG
JMSF044D16+ AGACCTTTCCATCGCTTCTTAACCACCGGAACAGCATTAGACTGACCTCCAACAGCCCCG
JMSF024G17+ AGACCTTTCCATCGCTTCTTAACCACCGGAACAGCATTAGACTGACCTCCAACAGCCCCG
JMSF013B22+ AGACCTTTCCATCGCTTCTTAACCACCGGAACAGCATTAGACTGACCTCCAACAGCCCCG
JMSF038B05+ AGACCTTTCCATCGCTTCTTAACCACCGGAACAGCATTAGACTGACCTCCAACAGCCCCG
____________________________________________________________
consensus AGACCTTTCCATCGCTTCTTAACCACCGGAACAGCATTAGACTGACCTCCAACAGCCCCG
. : . : . : . : . : . :
JMSF017C20+ CCCTTCATCTCCGCCTTAGCACTGTCACTCTACTCCTACTCAATTTCCTCTCTTCTATAT
JMSF044D16+ CCCTTCATCTCCGCCTTAGCACTGTCACTCTACTCCTACTCAATTTCCTCTCTTCTATAT
JMSF024G17+ CCCTTCATCTCCGCCTTAGCACTGTCACTCTACTCCTACTCAATTTCCTCTCTTCTATAT
JMSF013B22+ CCCTTCATCTCCGCCTTAGCACTGTCACTCTACTCCTACTCAATTTCCTCTCTTCTATAT
JMSF038B05+ CCCTTCATCTCCGCCTTAGCACTGTCACTCTACTCCTACTCAATTTCCTCTCTTCTATAT
____________________________________________________________
consensus CCCTTCATCTCCGCCTTAGCACTGTCACTCTACTCCTACTCAATTTCCTCTCTTCTATAT
. : . : . : . : . : . :
JMSF017C20+ ATTTCAACAACGTAATGAAGAGGCGATAAGCGATGACGTCTGCCGGAAATTGAGTCCCGC
JMSF044D16+ ATTTCAACAACGTAATGAAGAGGCGATAAGCGATGACGTCTGCCGGAAATTGAGTCCCGC
JMSF024G17+ ATTTCAACAACGTAATGAAGAGGCGATAAGCGATGACGTCTGCCGGAAATTGAGTCCCGC
JMSF013B22+ ATTTCAACAACGTAATGAAGAGGCGATAAGCGATGACGTCTGCCGGAAATTGAGTCCCGC
JMSF038B05+ ATTTCAACAACGTAATGAAGAGGCGATAAGCGATGACGTCTGCCGGAAATTGAGTCCCGC
____________________________________________________________
consensus ATTTCAACAACGTAATGAAGAGGCGATAAGCGATGACGTCTGCCGGAAATTGAGTCCCGC
. : . : . : . : . : . :
JMSF017C20+ TCTACCTTCCTCTCCAGCTCGACTGGACGGCCACCGCCTCCGCCACCGCAATGCAGTGAT
JMSF044D16+ TCTACCTTCCTCTCCAGCTCGACTGGACGGCCACCGCCTCCGCCACCGCAATGCAGTGAT
JMSF024G17+ TCTACCTTCCTCTCCAGCTCGACTGGACGGCCACCGCCTCCGCCACCGCAATGCAGTGAT
JMSF013B22+ TCTACCTTCCTCTCCAGCTCGACTGGACGGCCACCGCCTCCGCCACCGCAATGCAGTGAT
JMSF038B05+ TCTACCTTCCTCTCCAGCTCGACTGGACGGCCACCGCCTCCGCCACCGCAATGCAGTGAT
____________________________________________________________
consensus TCTACCTTCCTCTCCAGCTCGACTGGACGGCCACCGCCTCCGCCACCGCAATGCAGTGAT
. : . : . : . : . : . :
JMSF017C20+ CTAACACTGCGTCGGCGGCTGTTTCAGAGCG
JMSF044D16+ CTAACACTGCGTCGGCGGCTGTTTCAGAGCGT
JMSF024G17+ CTAACACTGCGTCGGCGGCTGTTTCAGAGCGTAGGCCGGCGGAATCAGGAGATAAGAATA
JMSF013B22+ CTAACACTGCGTCGGCGGCTGTTTCAGAGCGTAGGCCGGCGGAATCAGGAGATAAGAATA
JMSF038B05+ CTAACACTGCGTCGGCGGCTGTTTCAGAGCGTAGGCCGGCGGAATCAGGAGATAAGAATA
____________________________________________________________
consensus CTAACACTGCGTCGGCGGCTGTTTCAGAGCGTAGGCCGGCGGAATCAGGAGATAAGAATA
. : . : . : . : . : . :
JMSF024G17+ TAAGAT
JMSF013B22+ TAAGAT
JMSF038B05+ TAAGATCGTGAGATTGAGATTGGATTGAAAATAGTGAAATACTCAAGTTTACACTTGACC
____________________________________________________________
consensus TAAGATCGTGAGATTGAGATTGGATTGAAAATAGTGAAATACTCAAGTTTACACTTGACC