Contig 002363:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016F14Sequence581002363 (6)ref|XP_009621368.1|9e-39PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi739010352 (8)ref|XP_009621368.1|4e-82PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi
JMFF020E14Sequence561002363 (6)ref|XP_009621368.1|3e-34PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi741010352 (8)ref|XP_009621368.1|1e-82PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi
JMFF029F13Sequence426002363 (6)734010352 (8)ref|XP_009801936.1|8e-58PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana sylvestri
JMSF009G07Sequence380002363 (6)767010352 (8)ref|XP_009621368.1|4e-89PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi
JMSF015L02Sequence527002363 (6)ref|XP_009621368.1|2e-43PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi757010352 (8)ref|XP_009621368.1|2e-92PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi
JMSF037B12Sequence690002363 (6)ref|XP_009621368.1|4e-51PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi713010352 (8)ref|XP_009621368.1|2e-82PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF037B12+                                         TCCCATAGTTTCCAGTAGCAAAAGGTTGGT
                      ____________________________________________________________
consensus                                           TCCCATAGTTTCCAGTAGCAAAAGGTTGGT
 
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JMFF016F14+                                 ATCAACAACAAATTTATACTGGTGGTACCCAGGTGGTA
JMFF020E14+                                                     GGTGGTACCCAGGTGGTA
JMSF015L02+             TCATCATGCCTCCATTCACCATCAACAACAANTTTATACTGGTGGTACCCAGGTGGTA
JMSF037B12+           TCTCATCATGCCTCCATTCACCATCAACAACAAATTTATACTGGTGGTACCCAGGTGGTA
                      ____________________________________________________________
consensus             TCTCATCATGCCTCCATTCACCATCAACAACAAATTTATACTGGTGGTACCCAGGTGGTA
 
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JMFF016F14+           GGCTACAGATAGTTTGAAACACCGAAGGGCAACCCTCTACAGGAGTCATTGGCCACTGTG
JMFF020E14+           GGCTACAGATAGTTTGAAACACCGAAGGGCAACCCTCTACAGGAGTCATTGGCCACTGTG
JMSF015L02+           GGCTACAGATAGTTTGAAACACCGAAGGGCAACCCTCTACAGGAGTCATTGGCCACTGTG
JMSF037B12+           GGCTACAGATAGTTTGAAACACCGAAGGGCAACCCTCTACAGGAGTCATTGGCCACTGTG
                      ____________________________________________________________
consensus             GGCTACAGATAGTTTGAAACACCGAAGGGCAACCCTCTACAGGAGTCATTGGCCACTGTG
 
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JMFF016F14+           ACCACCCTGTGAATGTACCACTCAAGCACACAGTTCTTCCTCCATATGGCCAAACAAACC
JMFF020E14+           ACCACCCTGTGAATGTACCACTCAAGCACACAGTTCTTCCTCCATATGGCCAAACAAACC
JMSF015L02+           ACCACCCTGTGAATGTACCACTCAAGCACACAGTTCTTCCTCCATATGGCCAAACAAACC
JMFF029F13+                                                                    ACC
JMSF037B12+           ACCACCCTGTGAATGTACCACTCAAGCACACAGTTCTTCCTCCATATGGCCAAACAAACC
                      ____________________________________________________________
consensus             ACCACCCTGTGAATGTACCACTCAAGCACACAGTTCTTCCTCCATATGGCCAAACAAACC
 
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JMFF016F14+           GAGTAGTGATTAACACTGTGCTGCTTTCCCGAGCATAATCCATTCCAGCAGGATACATTC
JMFF020E14+           GAGTAGTGATTAACACTGTGCCGCTTTCCCGAGCATAATCCATTCCAGCAGGATACATTC
JMSF015L02+           GAGTAGTGATTAACACTGTGCTGCTTTCCCGAGCATAATCCATTCCAGCAGGATACATTC
JMFF029F13+           GAGTAGTGATTAACACTGTGCCGCTTTCCCGAGCATAATCCATTCCAGCAGGATACATTC
JMSF009G07+                           TGTGCTGCTTTCCCGAGCATAATCCATTCCAGCAGGATACATTC
JMSF037B12+           GAGTAGTGATTAACACTGTGCTGCTTTCCCGAGCATAATCCATTCCAGCAGGATACATTC
                      ____________________________________________________________
consensus             GAGTAGTGATTAACACTGTGCTGCTTTCCCGAGCATAATCCATTCCAGCAGGATACATTC
 
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JMFF016F14+           ACTCCCACAGATACCTTCAAATCCAGTAAACAGCCAAAGCTCAAATCTGATAAGTGCCGA
JMFF020E14+           ACTCCCACAGATACCTTCNAATCCAGTAAACAGCCAAAGCTCAAATCTGATAAGTGCCGA
JMSF015L02+           ACTCCCACAGATACCTTCAAATCCAGTAAACAGCCAAAGCTCAAATCTGATAAGTGCCGA
JMFF029F13+           ACTCCCACAGATACCTTCAAATCCAGTAAACAGCCAAAGCTCAAATCTGATAAGTGCCGA
JMSF009G07+           ACTCCCACAGATACCTTCAAATCCAGTAAACAGCCAAAGCTCAAATCTGATAAGTGCCGA
JMSF037B12+           ACTCCCACAGATACCTTCAAATCCAGTAAACAGCCAAAGCTCAAATCTGATAAGTGCCGA
                      ____________________________________________________________
consensus             ACTCCCACAGATACCTTCAAATCCAGTAAACAGCCAAAGCTCAAATCTGATAAGTGCCGA
 
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JMFF016F14+           TATTTCAAGGGATGTGACCCAAATCAAACAATTAGACGAAAGCTCATGACTCCATTCACC
JMFF020E14+           TATTTCAAGGGATGTGACCCAAATCAAACAATTAGACGAAAGCTCATGACTCCATTCACC
JMSF015L02+           TATTTCAAGGGATGTGACCCAAATCAAACAATTAGACGAAAGCTCATGACTCCATTCACC
JMFF029F13+           TATTTCAAGGGATGTGACCCAAATCAAACAATTAGACGAAAGCTCATGACTCCATTCACC
JMSF009G07+           TATTTCAAGGGATGTGACCCAAATCAAACAATTAGACGAAAGCTCATGACTCCATTCACC
JMSF037B12+           TATTTCAAGGGATGTGACCCAAATCAAACAATTAGACGAAAGCTCATGACTCCATTCACC
                      ____________________________________________________________
consensus             TATTTCAAGGGATGTGACCCAAATCAAACAATTAGACGAAAGCTCATGACTCCATTCACC
 
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JMFF016F14+           AAATATAAATTCCCCTAAGGGATACAAGAAACACTGCAATCGTTCGGATACACAATAATT
JMFF020E14+           AAATATAAATTCCCCTAAGGGATACAAGAAACACTGCAATCGTTCGGATACACAATAATT
JMSF015L02+           AAATATAAATTCCCCTAAGGGATACAAGAAACACTGCAATCGTTCGGATACACAATAATT
JMFF029F13+           AAATATAAATTCCCCTAAGGGATACAAGAAACACTGCAATCGTTCGGATACACAATAATT
JMSF009G07+           AAATATAAATTCCCCTAAGGGATACAAGAAACACTGCAATCGTTCGGATACACAATAATT
JMSF037B12+           AAATATAAATTCCCCTAAGGGATACAAGAAACACTGCAATCGTTCGGATACACAATAATT
                      ____________________________________________________________
consensus             AAATATAAATTCCCCTAAGGGATACAAGAAACACTGCAATCGTTCGGATACACAATAATT
 
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JMFF016F14+           TAGGAATAATACGAAAAGAAAATGAAAAAACCAGTTGAAATACAGAAGACGAAACAACTC
JMFF020E14+           TAGGAATAATACGAAAAGAAAATGAAAAAACCAGTTGAAATACAGAAGACGAAACAACTC
JMSF015L02+           TAGGAATAATACGAAAAGAAAATGAAAAAACCAGTTGAAATACAGAAGACGAAACAACTC
JMFF029F13+           TAGGAATAATACGAAAAGAAAATGAAAAAACCAGTTGAAATACAGAAGACGAAACAACTC
JMSF009G07+           TAGGAATAATACGAAAAGAAAATGAAAAAACCAGTTGAAATACAGAAGACGAAACAACTC
JMSF037B12+           TAGGAATAATACGAAAAGAAAATGAAAAAACCAGTTGAAATACAGAAGACGAAACAACTC
                      ____________________________________________________________
consensus             TAGGAATAATACGAAAAGAAAATGAAAAAACCAGTTGAAATACAGAAGACGAAACAACTC
 
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JMFF016F14+           GGAATCTTCGATCTCGAAAGAAAATGCGAAAAAGATTGAAGCTTCAATGAGAGTATGCGG
JMFF020E14+           GGAATCTTCGATCTCGAAAGAAAATGCGAAAAAGATTGAAGCTTCAATGAGAGTATGCGG
JMSF015L02+           GGAATCTTCGATCCCGAAAGAAAATGCGAAAAAGATTGAAGCTTCAA             
JMFF029F13+           GGAATCTTCGATCTCGAAAGAAAATGCGAAAAAGATTGAAGCTTCAATGAGAGTATGCGG
JMSF009G07+           GGAATCTTCGATCTCGAAAGAAAATGCGAAAAAGATTGAAGCTTCAATGAGAGTATGCGG
JMSF037B12+           GGAATCTTCGATCTCGAAAGAAAATGCGAAAAAGATTGAAGCTTCAATGAGAGTATGCGG
                      ____________________________________________________________
consensus             GGAATCTTCGATCTCGAAAGAAAATGCGAAAAAGATTGAAGCTTCAATGAGAGTATGCGG
 
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JMFF016F14+           TATAAAAAGTAAATTATAAGGAAATCGACAATCTTGTGAGTTGATGAGGGGTGAGGTAAT
JMFF020E14+           TATAAAAAGTAAATTATAAGGAAATCGACAATCTTGTGAGTTGATGAGGGGTGAGGTAAT
JMFF029F13+           TATAAAAAGTAAATTATAAGGAAATCGACAATCTTGTGAGTTGATGAGGGGTGAGGTAAT
JMSF009G07+           TATAAAAAGTAAATTATAAGGAAATCGACAATCTT                         
JMSF037B12+           TATAAAAAGTAAATTATAAGGAAATCGACAATCTTGTGAGTTGATGAGGGGTGAGGTAAT
                      ____________________________________________________________
consensus             TATAAAAAGTAAATTATAAGGAAATCGACAATCTTGTGAGTTGATGAGGGGTGAGGTAAT
 
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JMSF037B12+           TATGAGAGAGAACAGAAAAGATAACGAAACCCTAAACCTAGGCAAATTTTTTGCCCTTCC
                      ____________________________________________________________
consensus             TATGAGAGAGAACAGAAAAGATAACGAAACCCTAAACCTAGGCAAATTTTTTGCCCTTCC