Contig 002360:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF036M01Sequence626002360 (2)ref|XP_011088293.1|1e-72PREDICTED: putative nuclease HARBI1 [Sesamum indicum]713012778 (2)ref|XP_009596546.1|2e-89PREDICTED: putative nuclease HARBI1 [Nicotiana tomentosiformis] ref|XP_009596547
JMSF050I20Sequence650002360 (2)ref|XP_011088293.1|9e-79PREDICTED: putative nuclease HARBI1 [Sesamum indicum]793012778 (2)ref|XP_009596546.1|9e-117PREDICTED: putative nuclease HARBI1 [Nicotiana tomentosiformis] ref|XP_009596547

Alignment

This contig is upended


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JMSF050I20+                     CCCTGAGTGGTTTCCACCAGTCGGCGGCGACTCACAGGGATCTTGATGAA
JMSF036M01+                                             CGGCGACTCACAGGGATCTTGATGAA
                      ____________________________________________________________
consensus                       CCCTGAGTGGTTTCCACCAGTCGGCGGCGACTCACAGGGATCTTGATGAA
 
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JMSF050I20+           CTCAGGGTAGAGCTTAGTGGCCAAGAGCCGAGTGACCATGTTGGTAATTTTGGAAATTAG
JMSF036M01+           CTCAGGGTAGAGCTTAGTGGCCAAGAGCCGAGTGACCATGTTGGTAATTTTGGAAATTAG
                      ____________________________________________________________
consensus             CTCAGGGTAGAGCTTAGTGGCCAAGAGCCGAGTGACCATGTTGGTAATTTTGGAAATTAG
 
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JMSF050I20+           GTAAGGCTCGAGCCCGTAACGAGAAGCTAGGGTTTTAGCCGAGAGGCCGTGGGATAATCT
JMSF036M01+           GTAAGGCTCGAGCCCGTAACGAGAAGCTAGGGTTTTAGCCGAGAGGCCGTGGGATAATCT
                      ____________________________________________________________
consensus             GTAAGGCTCGAGCCCGTAACGAGAAGCTAGGGTTTTAGCCGAGAGGCCGTGGGATAATCT
 
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JMSF050I20+           AGAAAGAACCATAGCCACAGCGTAATCAGAAGGGAGAGAGAGCTGGGACTGAGTGATGTA
JMSF036M01+           AGAAAGAACCATAGCCACAGCGTAATCAGAAGGGAGAGAGAGCTGGGACTGAGTGATGTA
                      ____________________________________________________________
consensus             AGAAAGAACCATAGCCACAGCGTAATCAGAAGGGAGAGAGAGCTGGGACTGAGTGATGTA
 
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JMSF050I20+           GGGTTTGAGCTTATCAACAACAGTGGTAAACACCGGGTAAGAGAGACCATAGAGAGATCG
JMSF036M01+           GGGTTTGAGCTTATCAACAACAGTGGTAAACACCGGGTAAGAGAGACCATAGAGAGATCG
                      ____________________________________________________________
consensus             GGGTTTGAGCTTATCAACAACAGTGGTAAACACCGGGTAAGAGAGACCATAGAGAGATCG
 
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JMSF050I20+           CCACTGGGCGTCACGGAGAGGGGCTTCCATCGCCCATATGTGCTCCGTCGATAGGGCACG
JMSF036M01+           CCACTGGGCGTCACGGAGAGGGGCTTCCATCGCCCATATGTGCTCCGTCGATAGGGCACG
                      ____________________________________________________________
consensus             CCACTGGGCGTCACGGAGAGGGGCTTCCATCGCCCATATGTGCTCCGTCGATAGGGCACG
 
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JMSF050I20+           GAACGCGGCGACGGAGAATTCCGCGGCGGAAGGGGACGAAGGATTATTGGAATTAGAGGT
JMSF036M01+           GAACGCGGCGACGGAGAATTCCGCGGCGGAAGGGGACGAAGGATTATTGGAATTAGAGGT
                      ____________________________________________________________
consensus             GAACGCGGCGACGGAGAATTCCGCGGCGGAAGGGGACGAAGGATTATTGGAATTAGAGGT
 
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JMSF050I20+           TTTGGGCTTCTTCTTAGGCGGGTGGGAAGCGATGTAGGAGAGAACGGAAGCTATGGTGAA
JMSF036M01+           TTTGGGCTTCTTCTTAGGCGGGTGGGAAGCGATGTAGGAGAGAACGGAAGCTATGGTGAA
                      ____________________________________________________________
consensus             TTTGGGCTTCTTCTTAGGCGGGTGGGAAGCGATGTAGGAGAGAACGGAAGCTATGGTGAA
 
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JMSF050I20+           GAAGAGAAGAGGCGCGGCGGAGGTGGAGGTGAGGAGTGAGGTAGGAGAGGAGGGGGAGGC
JMSF036M01+           GAAGAGAAGAGGCGCGGCGGAGGTGGAGGTGAGGAGTGAGGTAGGAGAGGAGGGGGAGGC
                      ____________________________________________________________
consensus             GAAGAGAAGAGGCGCGGCGGAGGTGGAGGTGAGGAGTGAGGTAGGAGAGGAGGGGGAGGC
 
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JMSF050I20+           GGCGGAGGAGGCGGAGTCCGAGAGGACGGAGGTGGCGGGATCGAGGTGGTTATGGAGGTG
JMSF036M01+           GGCGGAGGAGGCGGAGTCCGAGAGGACGGAGGTGGCGGGATCGAGGTGGTTATGGAGGTG
                      ____________________________________________________________
consensus             GGCGGAGGAGGCGGAGTCCGAGAGGACGGAGGTGGCGGGATCGAGGTGGTTATGGAGGTG
 
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JMSF050I20+           GAGTAGATTTGAGAGCATAAGCATGAATGACTGATCCATCTCTCTCTCCCTTGCTCCCCC
JMSF036M01+           GAGTAGATTTGAGAGCATAAGCATGAATGACTGATCCATCTCTCTCTCCCTTGCTCCCCC
                      ____________________________________________________________
consensus             GAGTAGATTTGAGAGCATAAGCATGAATGACTGATCCATCTCTCTCTCCCTTGCTCCCCC