Contig 002355:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032L14Sequence504002355 (2)ref|XP_009771750.1|4e-47PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19611008589 (5)ref|XP_009777914.1|2e-58PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19
JMSF036A17Sequence668002355 (2)ref|XP_009771750.1|6e-75PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19700008589 (5)ref|XP_009777914.1|1e-76PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19

Alignment

This contig is upended


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JMSF036A17+                                                               TCCCGTTC
                      ____________________________________________________________
consensus                                                                 TCCCGTTC
 
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JMSF036A17+           CACCTTATAAGGTATTGCTTTTCGACCGGGTCGAGCTCGAGAGAAAACAAACCGGGTGCG
                      ____________________________________________________________
consensus             CACCTTATAAGGTATTGCTTTTCGACCGGGTCGAGCTCGAGAGAAAACAAACCGGGTGCG
 
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JMSF036A17+           GGATCCTCGGAGTTCTTCCAAGAAGTTAAAAGCTGTTTCTGCTTCGTGACTTTGTTGTAC
                      ____________________________________________________________
consensus             GGATCCTCGGAGTTCTTCCAAGAAGTTAAAAGCTGTTTCTGCTTCGTGACTTTGTTGTAC
 
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JMFF032L14+                              GCCATGTATGCGCCGGATTATCGATGCTCTGCCAAAGGGGC
JMSF036A17+           GAAAGCTTGCCGCCGGGCAGCCATGTATGCGCCGGATTATCGATGCTCTGCCAAAGGGGC
                      ____________________________________________________________
consensus             GAAAGCTTGCCGCCGGGCAGCCATGTATGCGCCGGATTATCGATGCTCTGCCAAAGGGGC
 
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JMFF032L14+           GTTTTTGAATTCGACCCATCACTCAAAATCAAATTACCGGAGTCCTGAAGAACCGCCGAC
JMSF036A17+           GTTTTTGAATTCGACCCATCACTCAAAATCAAATTACCGGAGTCCTGAAGAACCGCCGAC
                      ____________________________________________________________
consensus             GTTTTTGAATTCGACCCATCACTCAAAATCAAATTACCGGAGTCCTGAAGAACCGCCGAC
 
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JMFF032L14+           ACGGATTTTGAGGAGGAGGAGGAGATATTTGTGCTCCAAATTGAGATCTTTAATTCATTG
JMSF036A17+           ACGGATTTTGAGGAGGAGGAGGAGATATTTGTGCTCCAAATTGAGATCTTTAATTCATTG
                      ____________________________________________________________
consensus             ACGGATTTTGAGGAGGAGGAGGAGATATTTGTGCTCCAAATTGAGATCTTTAATTCATTG
 
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JMFF032L14+           AGGAGCACCAAATTGCCATCCACGATTTTCAGCTCTGCAGAGCTCTTATCAGATACTGGG
JMSF036A17+           AGGAGCACCAAATTGCCATCCACGATTTTCAGCTCTGCAGAGCTCTTATCAGATACTGGG
                      ____________________________________________________________
consensus             AGGAGCACCAAATTGCCATCCACGATTTTCAGCTCTGCAGAGCTCTTATCAGATACTGGG
 
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JMFF032L14+           GTTTCTCTGTTTGCTACCCAAACTACAGTCTGGGTGCTTACTTTCTTGTACCAGATACCG
JMSF036A17+           GTTTCTCTGTTTGCTACCCAAACTACAGTCTGGGTGCTTACTTTCTTGTACCAGATACCG
                      ____________________________________________________________
consensus             GTTTCTCTGTTTGCTACCCAAACTACAGTCTGGGTGCTTACTTTCTTGTACCAGATACCG
 
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JMFF032L14+           ATATAGTATCTGGAAGCATCACCCGGCTTGAAGAAGCCCAGCTCGAAGTTTCCCCCACCA
JMSF036A17+           ATATAGTATCTGGAAGCATCACCCGGCTTGAAGAAGCCCAGCTCGAAGTTTCCCCCACCA
                      ____________________________________________________________
consensus             ATATAGTATCTGGAAGCATCACCCGGCTTGAAGAAGCCCAGCTCGAAGTTTCCCCCACCA
 
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JMFF032L14+           GAAGAAACAATGGTTTGGTCCCCAGAAAGAGATTGGTTTGCAGAGATGGTGTCGGCGCCA
JMSF036A17+           GAAGAAACAATGGTTTGGTCCCCAGAAAGAGATTGGTTTGCAGAGATGGTGTCGGCGCCA
                      ____________________________________________________________
consensus             GAAGAAACAATGGTTTGGTCCCCAGAAAGAGATTGGTTTGCAGAGATGGTGTCGGCGCCA
 
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JMFF032L14+           TGGGAGAGATGGGTAGTGAGAGAGAAGGATAGGAAGATCAAAGAGGAAATTAACAGCGCC
JMSF036A17+           TGGGAGAGATGGGTAGTGAGAGAGAAGGATAGGAAGATCAAAGAGGAAATTAACAGCGCC
                      ____________________________________________________________
consensus             TGGGAGAGATGGGTAGTGAGAGAGAAGGATAGGAAGATCAAAGAGGAAATTAACAGCGCC
 
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JMFF032L14+           ATGGCTGCACAGAATTTGGTGAGAGCCTGAGAGGCCGAAGATC                 
JMSF036A17+           ATGGCTGCACAGAATTTGGTGAGAGCCTGAGAGGCCGAAGATCAGGAGGAAATCCGAATC
                      ____________________________________________________________
consensus             ATGGCTGCACAGAATTTGGTGAGAGCCTGAGAGGCCGAAGATCAGGAGGAAATCCGAATC