Contig 002353:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS022A03+                                                                    ACG
                      ____________________________________________________________
consensus                                                                      ACG
 
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JMFS022A03+           GTTGAGGGTTTCACAGTAGAAATTGGCTTTGTGCGCTCAACCACACAATTTGGTGATGAT
                      ____________________________________________________________
consensus             GTTGAGGGTTTCACAGTAGAAATTGGCTTTGTGCGCTCAACCACACAATTTGGTGATGAT
 
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JMFS022A03+           TTAAGTACTTCATTGCCATCCGACATTGGGATTTTATAATGTACCAAATCTGATAAAAAA
JMSF035M10+              AGTACTTCATTGCCATCCGACATTGGGATTTTATAATGTACCAAATCTGATAAAAAA
                      ____________________________________________________________
consensus             TTAAGTACTTCATTGCCATCCGACATTGGGATTTTATAATGTACCAAATCTGATAAAAAA
 
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JMFS022A03+           TTGACTGCTGCAATACCTGCCCTAACAAACTGGTCCGAAATGGGAGGTGACGAATGCATA
JMFS150G06+                                                             CGAATGCATA
JMSF035M10+           TTGACTGCTGCAATACCTGCCCTAACAAACTGGTCCGAAATGGGAGGTGACGAATGCATA
                      ____________________________________________________________
consensus             TTGACTGCTGCAATACCTGCCCTAACAAACTGGTCCGAAATGGGAGGTGACGAATGCATA
 
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JMFS022A03+           ATCTCCGAAGCTTCCAAGCTGCCATAACTAACACAATCTGCTCTCTTTGATGAATTAGTG
JMFS150G06+           ATCTCCGAAGCTTCCAAGCTGCCATAACTAACACAATCTGCTCTCTTTGATGAATTAGTG
JMSF035M10+           ATCTCCGAAGCTTCCAAGCTGCCATAACTAACACAATCTGCTCTCTTTGATGAATTAGTG
                      ____________________________________________________________
consensus             ATCTCCGAAGCTTCCAAGCTGCCATAACTAACACAATCTGCTCTCTTTGATGAATTAGTG
 
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JMFS022A03+           TAAGGTATAATTTGTGGGTCAGAAACTGAGTAGTTAGGCTTCTCGTTTTTCTGAAAGTTC
JMFS150G06+           TAAGGTATAATTTGTGGGTCAGAAACTGAGTAGTTAGGCTTCTCGTTTTTCTGAAAGTTC
JMSF035M10+           TAAGGTATAATTTGTGGGTCAGAAACTGAGTAGTTAGGCTTCTCGTTTTTCTGAAAGTTC
                      ____________________________________________________________
consensus             TAAGGTATAATTTGTGGGTCAGAAACTGAGTAGTTAGGCTTCTCGTTTTTCTGAAAGTTC
 
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JMFS022A03+           ACACCTTTTACACCATCTCTTGAAATCAAGGAGCCTACTCCTCCAGATGATTTCGAAACT
JMFS150G06+           ACACCTTTTACACCATCTCTTGAAATCAAGGAGCCTACTCCTCCAGATGATTTCGAAACT
JMSF035M10+           ACACCTTTTACACCATCTCTTGAAATCAAGGAGCCTACTCCTCCAGATGATTTCGAAACT
                      ____________________________________________________________
consensus             ACACCTTTTACACCATCTCTTGAAATCAAGGAGCCTACTCCTCCAGATGATTTCGAAACT
 
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JMFS022A03+           GAGGTGGATGAGATTTCCAGATGTCGAACATTGTTCTTTGTCTGAGGCCTTCTAGAAATA
JMFS150G06+           GAGGTGGATGAGATTTCCAGATGTCGAACATTGTTCTTTGTCTGAGGCCTTCTAGAAATA
JMSF035M10+           GAGGTGGATGAGATTTCCAGATGTCGAACATTGTTCTTTGTCTGAGGCCTTCTAGAAATA
                      ____________________________________________________________
consensus             GAGGTGGATGAGATTTCCAGATGTCGAACATTGTTCTTTGTCTGAGGCCTTCTAGAAATA
 
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JMFS022A03+           GAGCTCTCATCCTCAGAACAAGAACATGAACCATCTGCTACACTGGATTTTGAACCACTT
JMFS150G06+           GAGCTCTCATCCTCAGAACAAGAACATGAACCATCTGCTACACTGGATTTTGAACCACTT
JMSF035M10+           GAGCTCTCATCCTCAGAACAAGAACATGAACCATCTGCTACACTGGATTTTGAACCACTT
                      ____________________________________________________________
consensus             GAGCTCTCATCCTCAGAACAAGAACATGAACCATCTGCTACACTGGATTTTGAACCACTT
 
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JMFS022A03+           AAGATGAAGGACCTAGCAGATTGGGATAAGGTGCCGAGCTGCTTTGCACGTATCATACTC
JMFS150G06+           AAGATGAAGGACCTAGCAGATTGGGATAAGGTGCCGAGCTGCTTTGCACGTATCATACTC
JMSF035M10+           AAGATGAAGGACCTAGCAGATTGGGATAAGGTGCCGAGCTGCTTTGCACGTATCATACTC
                      ____________________________________________________________
consensus             AAGATGAAGGACCTAGCAGATTGGGATAAGGTGCCGAGCTGCTTTGCACGTATCATACTC
 
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JMFS022A03+           TGAGATGGTGTATATATGAGCCACCGGAAACGAAGATTGGT                   
JMFS150G06+           TGAGATGGTGTATATATGAGCCACCGGAAACGAAGATTGGTGAAGAGAAGAAATTAAAAC
JMSF035M10+           TGAGATGGTGTATATATGAGCCACCGGAAACGAAGATTGGTGAAGAGAAGAAATTAAAAC
                      ____________________________________________________________
consensus             TGAGATGGTGTATATATGAGCCACCGGAAACGAAGATTGGTGAAGAGAAGAAATTAAAAC
 
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JMFS150G06+           TAATTTGGATTCGAGAGAGAAGGTTAGAGAGGGCGGCTGTTCTCTGACTCCCTCCCGATG
JMSF035M10+           TAATTTGGATTCGAGAGAGAAGGTTAGAGAGGGCGGCTGTTCTCTGACTCCCTCCCGATG
                      ____________________________________________________________
consensus             TAATTTGGATTCGAGAGAGAAGGTTAGAGAGGGCGGCTGTTCTCTGACTCCCTCCCGATG
 
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JMFS150G06+           CCGTCGCCCCTTTTGAGTTTCCAACTAATTTGGGTGCAGGCAGCCCCGT           
JMSF035M10+           CCGTCGCCCCTTTTGAGTTTCCAACTAATTTGGGTGCAGGCAGCCCCGTGTGGTGACTAC
                      ____________________________________________________________
consensus             CCGTCGCCCCTTTTGAGTTTCCAACTAATTTGGGTGCAGGCAGCCCCGTGTGGTGACTAC