Contig 002350:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS053E04Sequence610002350 (3)ref|XP_004244283.2|7e-80PREDICTED: tubby-like F-box protein 7 [Solanum lycopersicum]
JMSF018C05Sequence412002350 (3)ref|XP_004244283.2|6e-30PREDICTED: tubby-like F-box protein 7 [Solanum lycopersicum]710007085 (2)ref|XP_009631710.1|3e-111PREDICTED: tubby-like F-box protein 7 [Nicotiana tomentosiformis]
JMSF035I06Sequence671002350 (3)ref|XP_004244283.2|9e-89PREDICTED: tubby-like F-box protein 7 [Solanum lycopersicum]719007085 (2)ref|XP_009631710.1|8e-112PREDICTED: tubby-like F-box protein 7 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035I06+ CACCTCAATTT
                      ____________________________________________________________
consensus CACCTCAATTT
 
. : . : . : . : . : . :
JMFS053E04+ GAGATAGATCGTCAGCATCGAGAGAAATTACGTATTC
JMSF035I06+ CCCGACATAGGCTTTACTTCTTTGAGATAGATCGTCAGCATCGAGAGAAATTACGTATTC
                      ____________________________________________________________
consensus CCCGACATAGGCTTTACTTCTTTGAGATAGATCGTCAGCATCGAGAGAAATTACGTATTC
 
. : . : . : . : . : . :
JMFS053E04+ AGTATGAGCACCAGTCNTACATCTTCGTGCAGCTAGGAGAAATTTTCCCTTATCCACAAG
JMSF035I06+ AGTATGAGCACCAGTCCTACATCTTCGTGCAGCTAGGAGAAATTTTCCCTTATCCACAAG
                      ____________________________________________________________
consensus AGTATGAGCACCAGTCCTACATCTTCGTGCAGCTAGGAGAAATTTTCCCTTATCCACAAG
 
. : . : . : . : . : . :
JMFS053E04+ TAATGGTGAAAGACCAAGATAAAGATAAAATGTGGAATTCTTCTTGTCACGTTTGATAAA
JMSF035I06+ TAATGGTGAAAGACCAAGATAAAGATAAAATGTGGAATTCTTCTTGTCACGTTTGATAAA
                      ____________________________________________________________
consensus TAATGGTGAAAGACCAAGATAAAGATAAAATGTGGAATTCTTCTTGTCACGTTTGATAAA
 
. : . : . : . : . : . :
JMFS053E04+ ACATTGAAGTGGAGCATCACGGGGCCCTGGCTGTTTAAGGCAAGAAGGGAAGGTGATTTT
JMSF035I06+ ACATTGAAGTGGAGCATCACGGGGCCCTGGCTGTTTAAGGCAAGAAGGGAAGGTGATTTT
                      ____________________________________________________________
consensus ACATTGAAGTGGAGCATCACGGGGCCCTGGCTGTTTAAGGCAAGAAGGGAAGGTGATTTT
 
. : . : . : . : . : . :
JMFS053E04+ TCCAGCGTGAAGGGATGACTTAACAGTTTCTAGAGTGACCTCTCTCCACCGCTTGCACAC
JMSF018C05+ GAAGGGATGACTTAACAGTTTCTAGAGTGACCTCTCTCCACCGCTTGCACAC
JMSF035I06+ TCCAGCGTGAAGGGATGACTTAACAGTTTCTAGAGTGACCTCTCTCCACCGCTTGCACAC
                      ____________________________________________________________
consensus TCCAGCGTGAAGGGATGACTTAACAGTTTCTAGAGTGACCTCTCTCCACCGCTTGCACAC
 
. : . : . : . : . : . :
JMFS053E04+ GCATCCACACGCAACGACGTTTTGGCGGCTCGGCCAACGCTCCTCGGTGGCCTCGACTCG
JMSF018C05+ GCATCCACACGCAACGACGTTTTGGCGGCTCGGCCAACGCTCCTCGGTGGCCTCGACTCG
JMSF035I06+ GCATCCACACGCAACGACGTTTTGGCGGCTCGGCCAACGCTCCTCGGTGGCCTCGACTCG
                      ____________________________________________________________
consensus GCATCCACACGCAACGACGTTTTGGCGGCTCGGCCAACGCTCCTCGGTGGCCTCGACTCG
 
. : . : . : . : . : . :
JMFS053E04+ CCGTATTATATCTCCGAGAATCTCCGGCAGCATGTTCGCCCACGAAACCGCATCTCCGCA
JMSF018C05+ CCGTATTATATCTCCGAGAATCTCCGGCAGCATGTTCGCCCACGAAACCGCATCTCCGCA
JMSF035I06+ CCGTATTATATCTCCGAGAATCTCCGGCAGCATGTTCGCCCACGAAACCGCATCTCCGCA
                      ____________________________________________________________
consensus CCGTATTATATCTCCGAGAATCTCCGGCAGCATGTTCGCCCACGAAACCGCATCTCCGCA
 
. : . : . : . : . : . :
JMFS053E04+ ACCGGATTCCTCGACAGCACCGCCACTTTTCTCGTCGTATTCATCTCTAACATTGACGAT
JMSF018C05+ ACCGGATTCCTCGACAGCACCGCCACTTTTCTCGTCGTATTCATCTCTAACATTGACGAT
JMSF035I06+ ACCGGATTCCTCGACAGCACCGCCACTTTTCTCGTCGTATTCATCTCTAACATTGACGAT
                      ____________________________________________________________
consensus ACCGGATTCCTCGACAGCACCGCCACTTTTCTCGTCGTATTCATCTCTAACATTGACGAT
 
. : . : . : . : . : . :
JMFS053E04+ GCAACAATCATCCCGCGCTCCCCTTACACAAGTCTCCGAAGCCTTAGATTCTCGAGAAGC
JMSF018C05+ GCAACAATCATCCCGCGCTCCCCTTACACAAGTCTCCGAAGCCTTAGATTCTCGAGAAGC
JMSF035I06+ GCAACAATCATCCCGCGCTCCCCTTACACAAGTCTCCGAAGCCTTAGATTCTCGAGAAGC
                      ____________________________________________________________
consensus GCAACAATCATCCCGCGCTCCCCTTACACAAGTCTCCGAAGCCTTAGATTCTCGAGAAGC
 
. : . : . : . : . : . :
JMFS053E04+ TCTGGAGAAAGTATGCGATCCACTTAGGTTTCTACGCGGGAGAAACGAACGCCTCAGTGA
JMSF018C05+ TCTGGAGAAAGTATGCGATCCACTTAGGTTTCTACGCGGGAGAAACGAACGCCTCAGTGA
JMSF035I06+ TCTGGAGAAAGTATGCGATCCACTTAGGTTTCTACGCGGGAGAAACGAACGCCTCAGTGA
                      ____________________________________________________________
consensus TCTGGAGAAAGTATGCGATCCACTTAGGTTTCTACGCGGGAGAAACGAACGCCTCAGTGA
 
. : . : . : . : . : . :
JMFS053E04+ CATCCTTTCCTTTCAGACCTTCCCTCTTTCTCT
JMSF018C05+ CATCCTTTCCTTTCAGACCTTCCCTCTTTCTCTCTCTAATTTTCTCCAGGTAGTTCTG
JMSF035I06+ CATCCTTTCCTTTCAGACCTTCCCTCTTTCTCTCTCTAATTTTCTCCAGGTAGTTCTGTC
                      ____________________________________________________________
consensus CATCCTTTCCTTTCAGACCTTCCCTCTTTCTCTCTCTAATTTTCTCCAGGTAGTTCTGTC