Contig 002344:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044B18Sequence623002344 (5)ref|XP_004240961.1|5e-24PREDICTED: WD repeat-containing protein 44 [Solanum lycopersicum]608012425 (2)
JMFS093D03Sequence615002344 (5)ref|XP_004240961.1|4e-23PREDICTED: WD repeat-containing protein 44 [Solanum lycopersicum]
JMFS150A09Sequence601002344 (5)ref|XP_006360158.1|76.6PREDICTED: WD repeat-containing protein 44-like [Solanum tuberosum]
JMSF017P12Sequence461002344 (5)705012425 (2)
JMSF034H19Sequence617002344 (5)259020449ref|XP_009631310.1|1e-05PREDICTED: lysosomal Pro-X carboxypeptidase [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS093D03+                    GATGATCCAGATTTGCACTTGTACATAGGAAGGCCTCATNTGAACCTGGCT
JMFF044B18+                       GATCCAGATTTGCACTTGTACATAGGAAGGCCTCATTTGAACCTGGCT
                      ____________________________________________________________
consensus                      GATGATCCAGATTTGCACTTGTACATAGGAAGGCCTCATTTGAACCTGGCT
 
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JMFS093D03+           CTTCTAATGAACCCATAGCATCAACAGATGAACTTGGAACAGAAGATTGGCTACAAGAAA
JMFF044B18+           CTTCTAATGAACCCATAGCATCAACAGATGAACTTGGAACAGAAGATTGGCTACAAGAAA
                      ____________________________________________________________
consensus             CTTCTAATGAACCCATAGCATCAACAGATGAACTTGGAACAGAAGATTGGCTACAAGAAA
 
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JMFS093D03+           ATTCACCTTGAAAAATTGGGTTTCTCAGCACAGCCCCAGTGCTCTCATTAATTCTATCAT
JMFF044B18+           ATTCACCTTGAAAAATTGGGTTTCTCAGCACAGCCCCAGTGCTCTCATTAATTCTATCAT
                      ____________________________________________________________
consensus             ATTCACCTTGAAAAATTGGGTTTCTCAGCACAGCCCCAGTGCTCTCATTAATTCTATCAT
 
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JMFS093D03+           TCTCTCTGCAGAGGGCACTAGAGCCGCAATCTAAATCAGATCCGATCCATTCAAGGAATT
JMFF044B18+           TCTCTCTGCAGAGGGCACTAGAGCCGCAATCTAAATCAGATCCGATCCATTCAAGGAATT
JMFS150A09+                                           AAATCAGATCCGATCCATTCAAGGAATT
                      ____________________________________________________________
consensus             TCTCTCTGCAGAGGGCACTAGAGCCGCAATCTAAATCAGATCCGATCCATTCAAGGAATT
 
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JMFS093D03+           TCGTGCGGCGCTCTCTAATACTTTTGGGACTTCTAACCCACACATCATATTGGTAGCTTC
JMFF044B18+           TCGTGCGGCGCTCTCTAATACTTTTGGGACTTCTAACCCACACATCATATTGGTAGCTTC
JMFS150A09+           TCGGGCGGCGCTCTCTAATACTTTTGGGACTTCTAACCCACACATCATATTGGTAGCTTC
JMSF034H19+                                                      ATCATATTGGTAGCTTC
                      ____________________________________________________________
consensus             TCGTGCGGCGCTCTCTAATACTTTTGGGACTTCTAACCCACACATCATATTGGTAGCTTC
 
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JMFS093D03+           TGGAGACACAATGATCAACCCATACATTAGACTCCAGGCAATTAGGACTTGCAGCAGATG
JMFF044B18+           TGGAGACACAATGATCAACCCATACATTAGACTCCAGGCAATTAGGACTTGCAGCAGATG
JMFS150A09+           TGGAGACACAATGATCAACCCATACATTAGACTCCAGGCAATTAGGACTTGCAGCAGATG
JMSF034H19+           TGGAGACACANTGATCAACCCATACATTAGACTCCAGGCANTTAGGACTTGCAGCAGATG
                      ____________________________________________________________
consensus             TGGAGACACAATGATCAACCCATACATTAGACTCCAGGCAATTAGGACTTGCAGCAGATG
 
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JMFS093D03+           GCTGGACAATACTCTCCGGGGCATCAAAAAACTGACAATCCTCTTCATCCTGGCGGAAGC
JMFF044B18+           GCTGGACAATACTCTCCGGGGCATCAAAAAACTGACAATCCTCTTCATCCTGGCGGAAGC
JMFS150A09+           GCTGGACAATACTCTCCGGGGCATCAAAAAACTGACAATCCTCTTCATCCTGGCGGAAGC
JMSF034H19+           GCTGGACANTACTCTCCGGGGCATCAAAAAACTGACANTCNTCTTCATCCNGGCGGAAGC
                      ____________________________________________________________
consensus             GCTGGACAATACTCTCCGGGGCATCAAAAAACTGACAATCCTCTTCATCCTGGCGGAAGC
 
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JMFS093D03+           TACCCATTATACCTTGAGTTCACCCCATGAAATCCAACCCTCAAGACATAACTTTTAAAG
JMFF044B18+           TACCCATTATACCTTGAGTTCACCCCATGAAATCCAACCCTCAAGACATAACTTTTAAAG
JMFS150A09+           TACCCATTATACCTTGAGTTCACCCCATGAAATCCAACCCTCAAGACATAACTTTTAAAG
JMSF017P12+                        TTGAGTTCACCCCANGAAATCCAACCCTCANGACATAACTTTTAAAG
JMSF034H19+           TACCCANTATACCNTGAGTTCNCCCCANGAAATCCANCCCTCANGACATAACTTTTAAAG
                      ____________________________________________________________
consensus             TACCCATTATACCTTGAGTTCACCCCATGAAATCCAACCCTCAAGACATAACTTTTAAAG
 
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JMFS093D03+           CCCTAGACAATGTGCTCAATTCCTTCCTTTATAATAATGGAACATTGGTATATTTTGCTT
JMFF044B18+           CCCTAGACAATGTGCTCAATTCCTGCCTTTATAATAATGGAACATTGGTATATTTTGCTT
JMFS150A09+           CCCTAGACAATGTGCTCAATTCCTTCCTTTATAATAATGGAACATTGGTATATTTTGCTT
JMSF017P12+           CCCTAGACAATGTGCTCAATTCCTTCCNTTATAATAATGGAACANTGGTATATTTTGCTT
JMSF034H19+           CCCTAGACAATGTGCTCANTTCCTTCCTTTATAATAATGGAACACTGGTATATTTTGCTT
                      ____________________________________________________________
consensus             CCCTAGACAATGTGCTCAATTCCTTCCTTTATAATAATGGAACATTGGTATATTTTGCTT
 
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JMFS093D03+           CTTAACAGTATTGAATCAGGCGTAATAGAACAAGAGATTTTAGCAGCTCATGTTCCGGAA
JMFF044B18+           CTTAACAGTATTGAATCAGGCGTAATAGAACAAGAGATTTTAGCAGCTCATGTTCCGGAA
JMFS150A09+           CTTAACAGTATTGAATCAGGCGTAATAGAACAAGAGATTTTAGCAGCTCATGTTCCGGAA
JMSF017P12+           CTTAACANTATTGAATCAGGCGTAATAGAACANGAGATTTTAGCAGCTCATGTTCCGGAA
JMSF034H19+           CTTAACANTATTGAATCAGGCGTAATAGAACANGAGATTTTAGCAGCTCANGTTCCGGAA
                      ____________________________________________________________
consensus             CTTAACAGTATTGAATCAGGCGTAATAGAACAAGAGATTTTAGCAGCTCATGTTCCGGAA
 
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JMFS093D03+           GAAGAGAACACAGTTACTCATGTG                                    
JMFF044B18+           GAAGAGAACACAGTTACTCATGTGCCTCTTCCC                           
JMFS150A09+           GAAGAGAACACAGTTACTCATGTGCCTCTTCCCTGCGCTCATTCAGCAAAGAAGAGAGTG
JMSF017P12+           GAAGAGAACACANTTACTCATGTGCCTCTTCCCTGCGCTCATTCAGCAAAGAAGAGAGTG
JMSF034H19+           GAAGAGAACACANTTACTCATGTGCCTCTTCCCNGCGCTCANTCAGCAAAGAAGAGAGTG
                      ____________________________________________________________
consensus             GAAGAGAACACAGTTACTCATGTGCCTCTTCCCTGCGCTCATTCAGCAAAGAAGAGAGTG
 
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JMFS150A09+           CTGACCATTAAAAGATGGGGAGGAAAAACTTGTGTAATTAATGGCGGAAGACGGGGTGAA
JMSF017P12+           CTGACCANTAAAAGATGGGGAGGAAAAACTTGTGTAATTAATGGCGGAAGACGGGGTGAA
JMSF034H19+           CTGACCANTAAAAGATGGGGAGGAAAAACTTGTGTANTTAATGGCGGAAGACGGGGTGAA
                      ____________________________________________________________
consensus             CTGACCATTAAAAGATGGGGAGGAAAAACTTGTGTAATTAATGGCGGAAGACGGGGTGAA
 
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JMFS150A09+           ATTCGGAAAGTTGGAAAATTAAAATGGAAAAACTAATTTTGGAAGGAGAAAGTGAAATTT
JMSF017P12+           ATTCGGAAAGTTGGAAAATTAAAATGGAAAAACTAATTTTGGAAGGAGAAAGTGAAATTT
JMSF034H19+           ATTCNGAAAGTTGGAAAATTAAAATGGAAAAACTANTTTTGGAAGGAGAAAGTGAAATTT
                      ____________________________________________________________
consensus             ATTCGGAAAGTTGGAAAATTAAAATGGAAAAACTAATTTTGGAAGGAGAAAGTGAAATTT
 
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JMFS150A09+           TCATAGATATTCGTGATTAACGGGCCCGAGAAA                           
JMSF017P12+           TCATAGATATTCGTGATTAACGGGCCCGAGAAACGAGATTTCGAGAC----GAGAGAGAG
JMSF034H19+           TCNTAGATATTCGTGATTAACGGGCCCGNGAAACGAGATTTCGAGACGAGAGAGAGAGAG
                      ____________________________________________________________
consensus             TCATAGATATTCGTGATTAACGGGCCCGAGAAACGAGATTTCGAGACGAGAGAGAGAGAG
 
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JMSF017P12+           AGAGAGAGAGAGAGAGGTCTGAGACTCTCTGGTTAATGGTTATGCGTAGAGAGGCTG   
JMSF034H19+           AGAGAGAGAGAGAGAGGTCTGAGACTCTCTGGTTAATGGTTATGCGTAGAGAGGCTGGCC
                      ____________________________________________________________
consensus             AGAGAGAGAGAGAGAGGTCTGAGACTCTCTGGTTAATGGTTATGCGTAGAGAGGCTGGCC