Contig 002340:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037P23+                                                         ATCCTAACAATGTT
                      ____________________________________________________________
consensus                                                           ATCCTAACAATGTT
 
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JMSF037P23+           GCAAATTTCACATAGAATAAAGGACACATGTACAAGGGTTTGAAGATGGAAATATTATAC
JMSF033M13+                TTTCACATAGAATAAAGGACACATGTACAAGGGTTTGAAGATGGAAATATTATAC
                      ____________________________________________________________
consensus             GCAAATTTCACATAGAATAAAGGACACATGTACAAGGGTTTGAAGATGGAAATATTATAC
 
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JMSF037P23+           ACTAG-----AAAACCAGGTTCAACATCATTTACCTGCCTTCAAGAGAATGAATGAAGTT
JMSF033M13+           ACTAGAAATTAAAACCAGGTTCAACATCATTTACCTGCCTTCAAGAGAATGAATGAGGTT
                      ____________________________________________________________
consensus             ACTAGAAATTAAAACCAGGTTCAACATCATTTACCTGCCTTCAAGAGAATGAATGAGGTT
 
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JMSF037P23+           AGAAAATTCCCCAAAGTTGAACAGTTCAATGCAATGCAGGTGTTCTCAGGAAACTATAGA
JMSF033M13+           AGAAAATTCCCCAAAGTTGAATAGTTCAATGCAATGCAGGTGTTCTCAGGAAACTATAGA
                      ____________________________________________________________
consensus             AGAAAATTCCCCAAAGTTGAATAGTTCAATGCAATGCAGGTGTTCTCAGGAAACTATAGA
 
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JMSF013O07+                                 GAACCAAAATCTACATTTAAACAGCCTCAACCTCAAAA
JMSF037P23+           AATAGTTACACCGGCAAAACCTGAACCAAAATCTACATTTAAACAGCCTCAACCTCAAAA
JMSF033M13+           AATAGTTACACCGGCAAAACCTGAACCAAAATCTACAGTTAAACAGCCTCAACCTCAAAA
                      ____________________________________________________________
consensus             AATAGTTACACCGGCAAAACCTGAACCAAAATCTACATTTAAACAGCCTCAACCTCAAAA
 
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JMSF013O07+           TCTAGTGCTTGAACCAATGGAAGTCCACTCTATGGAGGTTGCTACTGATTTCCTGACCCA
JMSF037P23+           TCTAGTGCTTGAACCAATGGAAGTCCACTCTATGGAGGTTGCTACTGATTTCCTGACCCA
JMSF002F08+                                        CTATGGAGGTTGCTACTGATTTCCTGACCCA
JMSF033M13+           TCTAGTGCTTGAACCAATGGAAGTTCACTCTATGGAGGTTGCTACTGATTTCCTGACCCA
                      ____________________________________________________________
consensus             TCTAGTGCTTGAACCAATGGAAGTCCACTCTATGGAGGTTGCTACTGATTTCCTGACCCA
 
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JMSF013O07+           GAGAAACCCTTCCGGGCGGTCGCTGACCTTCGGTAGAAATTAACCTACCGAAGTTGCGAT
JMSF037P23+           GAGAAACCCTTCCGGGCGGTCGCTGACCTTCGGTAGAAATTAACCTACCGAAGTTGCGAT
JMSF002F08+           GAGAAACCCTTCCGGGCGGTCGCTGACCTTCGGTAGAAATTAACCTACGGAAGATGCGAT
JMSF033M13+           GAGAAACCCTTCCGGGCGGTCGCTGACCTTCGGTAGAAATTAACCTACGGAAGATGCGAT
                      ____________________________________________________________
consensus             GAGAAACCCTTCCGGGCGGTCGCTGACCTTCGGTAGAAATTAACCTACGGAAGTTGCGAT
 
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JMSF013O07+           TTCCTCCATCCCCAGCGTACCTATGGAGGTTGCTGCTGACTTCCTGACCCAAAGAAACCC
JMSF037P23+           TTCCTCCATCCCCAGCGTACCTATGGAGGTTGCTGCTGACTTCCTGACCCAAAGAAACCC
JMSF002F08+           TTCCTCCATCCCCAGCGTAACTATGGAGGTTGCTGCTGACTTCCTGACCCAGAGAAACCC
JMSF033M13+           TTCCTCCATCCCCAGCGTAACTATGGAGGTTGCTGCTGACTTCCTGACCCAGAGAAACCC
                      ____________________________________________________________
consensus             TTCCTCCATCCCCAGCGTACCTATGGAGGTTGCTGCTGACTTCCTGACCCAGAGAAACCC
 
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JMSF013O07+           TTCCCGGTGGTCGCTGACCTTCAGTAGCCCTTCAGTAGAAATTAACCTGTTGGAGTTGCG
JMSF037P23+           TTCCCGGTGGTCGCTGACCTTCAGTAGCCCTTCAGTAGAAATTAACCTGTTGGAGTTGCG
JMSF002F08+           TTCCCGGTGGTCGCTGACCTTCAGTAGCCCTTCAGTAGAAATTAACCTGTTGGAGTTGCG
JMSF033M13+           TTCCCGGTGGTCGCTGACCTTCAGTAGCCCTTCAGTAGAAATTAACCTGTTGGAGTTGCG
                      ____________________________________________________________
consensus             TTCCCGGTGGTCGCTGACCTTCAGTAGCCCTTCAGTAGAAATTAACCTGTTGGAGTTGCG
 
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JMSF013O07+           ATTTCCTCCCTTCCCAACGTACCTATGGAGGTTGCTGCTGATTTCCTGACCTATGGAGGT
JMSF037P23+           ATTTCCTCCCTTCCCAACGTACCTATGGAGGTTGCTGCTGATTTCCTGACCTATGGAGGT
JMSF002F08+           ATTTCCTCCCTTCCCAACGTACCTATGGAGGTTGCTGCTGATTTCCTGACCTATGGAGGT
JMSF033M13+           ATTTCCTCCCTTCCCAACGTACCTATGGAGGTTGCTGCTGATTTCCTGACCTATGGAGGT
                      ____________________________________________________________
consensus             ATTTCCTCCCTTCCCAACGTACCTATGGAGGTTGCTGCTGATTTCCTGACCTATGGAGGT
 
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JMSF002F08+           CGCTACTGATTTCCTGACCTATGGAGGTTGCGGCGGACGGCAGTGGTGAAGGGCGGAAAC
JMSF033M13+           CGCTACTGATTTCCTGACCTATGGAGGTTGCGGCGGACGGCAGTGGTGAAGGGCGGAAAC
                      ____________________________________________________________
consensus             CGCTACTGATTTCCTGACCTATGGAGGTTGCGGCGGACGGCAGTGGTGAAGGGCGGAAAC
 
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JMSF002F08+           CCTTTGCCGTGAAACACTAAAACCCTTCTGGAGTGAAAATAGAGATACCCTTT       
JMSF033M13+           CCTTTGCCGTGAAACACTAAAACCCTTCTGGAGTGAAAATAGAGATACCCTTTGCCATAC
                      ____________________________________________________________
consensus             CCTTTGCCGTGAAACACTAAAACCCTTCTGGAGTGAAAATAGAGATACCCTTTGCCATAC