Contig 002339:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS097E12Sequence545002339 (2)ref|XP_009764736.1|2e-90PREDICTED: probable alpha-mannosidase I MNS5 isoform X3 [Nicotiana sylvestris]
JMSF033M03Sequence658002339 (2)ref|XP_009764736.1|4e-106PREDICTED: probable alpha-mannosidase I MNS5 isoform X3 [Nicotiana sylvestris]651021517ref|XP_011071787.1|2e-103PREDICTED: probable alpha-mannosidase I MNS5 isoform X2 [Sesamum indicum]

Alignment

This contig is upended


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JMFS097E12+                                                              GAAAACGTC
JMSF033M03+             AAGTTGATCCAAGCATATGGCAGTCCGGTTGGCGTATCAAAAGCAGGTAGAAAACGTC
                      ____________________________________________________________
consensus               AAGTTGATCCAAGCATATGGCAGTCCGGTTGGCGTATCAAAAGCAGGTAGAAAACGTC
 
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JMFS097E12+           TCCCCAAATCCTCTGCCAGATCAAGAAGTTGATTCTTATAAGTTCCTTGAACCAACCTGT
JMSF033M03+           TCCCCAAATCCTCTGCCAGATCAAGAAGTTGATTCTTATAAGTTCCTTGAACCAACCTGT
                      ____________________________________________________________
consensus             TCCCCAAATCCTCTGCCAGATCAAGAAGTTGATTCTTATAAGTTCCTTGAACCAACCTGT
 
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JMFS097E12+           TTGTAGAATCAGTTGCAAGAATATGAGCAGAAACTAGTCCTCCAAGAACTCTTATGTTGC
JMSF033M03+           TTGTAGAATCAGTTGCAAGAATATGAGCAGAAACTAGTCCTCCAAGAACTCTTATGTTGC
                      ____________________________________________________________
consensus             TTGTAGAATCAGTTGCAAGAATATGAGCAGAAACTAGTCCTCCAAGAACTCTTATGTTGC
 
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JMFS097E12+           ACTCAAAAAGATTTATTCTTGCATCAACGTCAAATGACAGATTTCCTGAAAGCCAAAGAA
JMSF033M03+           ACTCAAAAAGATTTATTCTTGCATCAACGTCAAATGACAGATTTACTGAAAGCCAAAGAA
                      ____________________________________________________________
consensus             ACTCAAAAAGATTTATTCTTGCATCAACGTCAAATGACAGATTTCCTGAAAGCCAAAGAA
 
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JMFS097E12+           CTGCCTTTTCAAACTCAGTGTGGTTACCCAAGATAACAAGCCTGGATAATGATTCAATCA
JMSF033M03+           CTGCCTTTTCAAACTCAGTGTGGTTACCCAAGATAACAAGACTGGATAATGATTCAATCA
                      ____________________________________________________________
consensus             CTGCCTTTTCAAACTCAGTGTGGTTACCCAAGATAACAAGCCTGGATAATGATTCAATCA
 
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JMFS097E12+           GTGTAAGAGCTGATCCACTATACTTCTGCGGAAGATGTTCAAGCTTCAAATTTCCAAGCT
JMSF033M03+           GTGTAAGAGCTGTTCCACTATACTTCTGCGGAAGATGTTCAAGCTTCAAATTTCCAAGCT
                      ____________________________________________________________
consensus             GTGTAAGAGCTGTTCCACTATACTTCTGCGGAAGATGTTCAAGCTTCAAATTTCCAAGCT
 
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JMFS097E12+           CGCTAAGAGAATCTGTGTACGTTTTGGTCAAAGGTTTAAGCTCATCATGCGGCAACGCAT
JMSF033M03+           CGCTAAGAGAATCTGTGTACGTTTTGGTCAAAGGTTTAAGCTCATCATGCGGAAACGCAT
                      ____________________________________________________________
consensus             CGCTAAGAGAATCTGTGTACGTTTTGGTCAAAGGTTTAAGCTCATCATGCGGCAACGCAT
 
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JMFS097E12+           GCATCATATAGTTCTCGTAAGCATGGTAAAACATTTTGCGACCTTTCTGACTCATGCGTT
JMSF033M03+           GCATCATATAGTTCTCGTAAGCATGGTAAAACATTTTGCGAACTTTCTGACTCATGCGTT
                      ____________________________________________________________
consensus             GCATCATATAGTTCTCGTAAGCATGGTAAAACATTTTGCGACCTTTCTGACTCATGCGTT
 
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JMFS097E12+           TCCTCCTAGCTGCCATAGGATTAGGAGGATCAAACCCAGAGAAAGACATTGGAAAGAAGG
JMSF033M03+           TCCTCCTAGCTGCCATAGGATTAGGAGGATCAAACCCAGAGAAAGACATTGGAAAGAAGG
                      ____________________________________________________________
consensus             TCCTCCTAGCTGCCATAGGATTAGGAGGATCAAACCCAGAGAAAGACATTGGAAAGAAGG
 
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JMFS097E12+           TTGAAAGAAATATGAGCATACATATCAGAACCCTTTTCCTCA                  
JMSF033M03+           TTGAAAGAAATATGAGCATACATATCAGAACCCTTTTCCTCATGATTCTAAAGCTTTTCG
                      ____________________________________________________________
consensus             TTGAAAGAAATATGAGCATACATATCAGAACCCTTTTCCTCATGATTCTAAAGCTTTTCG
 
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JMSF033M03+           GGTCTATTGAGAAGGGCAGCAGAGATCTTCGTTTGAATATGAATCAGCAGACAGCAGATC
                      ____________________________________________________________
consensus             GGTCTATTGAGAAGGGCAGCAGAGATCTTCGTTTGAATATGAATCAGCAGACAGCAGATC