Contig 002336:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009D09Sequence353002336 (5)ref|XP_006364750.1|8e-35PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum tuberosum]762002775 (5)ref|XP_009619333.1|3e-97PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor
JMSF013J24Sequence406002336 (5)ref|XP_006364750.1|8e-46PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum tuberosum]654002775 (5)ref|XP_009619333.1|4e-72PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor
JMSF026B07Sequence666002336 (5)ref|XP_004249093.1|5e-98PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum lycopersicum]658002775 (5)ref|XP_009619333.1|7e-74PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor
JMSF033J02Sequence692002336 (5)ref|XP_006364750.1|1e-73PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum tuberosum]658002775 (5)ref|XP_009619333.1|7e-74PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor
JMSF043M16Sequence772002336 (5)ref|XP_004249093.1|8e-123PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum lycopersicum]665002775 (5)ref|XP_009619333.1|4e-75PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor

Alignment

This contig is upended


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JMSF043M16+                                                                     AA
                      ____________________________________________________________
consensus                                                                       AA
 
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JMSF043M16+           ANGGACATGACGGTTGCAACCAATGCAAACATGGATATAATAAGACACGGCAGGAAGTAT
                      ____________________________________________________________
consensus             ANGGACATGACGGTTGCAACCAATGCAAACATGGATATAATAAGACACGGCAGGAAGTAT
 
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JMSF043M16+           GGGAATTTCCCAAAAAAGGACTCTGCAGAAAATATGGTGGGATACTTTTCTGCAGGCTGG
JMSF026B07+                                                             TGCAGGCTGG
                      ____________________________________________________________
consensus             GGGAATTTCCCAAAAAAGGACTCTGCAGAAAATATGGTGGGATACTTTTCTGCAGGCTGG
 
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JMSF043M16+           GCAAAATAACCTCCAACAGCCGGACCAATCACCAAGCCTATTCCCCATGCTGTGCTAACT
JMSF026B07+           GCAAAATAACCTCCAACAGCCGGACCAATCACCAAGCCTATTCCCCATGCTGTGCTAACT
                      ____________________________________________________________
consensus             GCAAAATAACCTCCAACAGCCGGACCAATCACCAAGCCTATTCCCCATGCTGTGCTAACT
 
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JMSF043M16+           GCAGATATGCCCAAAGCATGATATTCTCTACGGCAAATTTCAGAAGCATATGCCCTCATT
JMSF026B07+           GCAGATATGCCCAAAGCATGATATTCTCTACGGCAAATTTCAGAAGCATATGCCCTCATT
JMSF033J02+                                       TACGGCAAATTTCAGAAGCATATGCCCTCATT
                      ____________________________________________________________
consensus             GCAGATATGCCCAAAGCATGATATTCTCTACGGCAAATTTCAGAAGCATATGCCCTCATT
 
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JMSF043M16+           GTACCAATTATTCCACACAAAGCTCCTAGAAGAAATCTTGTAATAATAGCCATCCAATAG
JMSF026B07+           GTACCAATTATTCCACACAAAGCTCCTAGAAGAAATCTTGTAATAACAGCCATCCAATAG
JMSF033J02+           GTACCAATTATTCCACACAAAGCTCCTAGAAGAAATCTTGTAATAATAGCCATCCAATAG
                      ____________________________________________________________
consensus             GTACCAATTATTCCACACAAAGCTCCTAGAAGAAATCTTGTAATAATAGCCATCCAATAG
 
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JMSF043M16+           TTTACACTAAGGCCAAAAACGGCATTGAATATAACCACTGTTACTGTGCCAATGATGACC
JMSF026B07+           TTTACACTAAGGCCAAAAACGGCATTGAATATAACCACTGTTACTGTGCCAATGATGACC
JMSF033J02+           TTTACACTAAGGCCAAAAACGGCATTGAATATAACCACTGTTACTGTGCCAATGATGACC
                      ____________________________________________________________
consensus             TTTACACTAAGGCCAAAAACGGCATTGAATATAACCACTGTTACTGTGCCAATGATGACC
 
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JMSF043M16+           ACAGGCTTTCTGCCATATCGATCAGCAATGATTCCCCAAAGAACAGATGTCAAAGCTCTC
JMSF013J24+                   TCTGCCATATCGATCAGCAATGATTCCCCAAAGAACAGATGTCAAAGCTCTC
JMSF026B07+           ACAGGCTTTCTGCCATATCGATCAGCAATGATTCCCCAAAGAACAGATGTCAAAGCTCTC
JMSF033J02+           ACAGGCTTTCTGCCATATCGATCAGCAATGATTCCCCAAAGAACAGATGTCAAAGCTCTC
                      ____________________________________________________________
consensus             ACAGGCTTTCTGCCATATCGATCAGCAATGATTCCCCAAAGAACAGATGTCAAAGCTCTC
 
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JMSF043M16+           CCCAACATGAATGATGACCCTACATATCCAGCATAATAACTAATATCTTCCTCCCTTTCA
JMSF013J24+           CCCAACATGAATGATGACCCTACATATCCAGCATAATAACTAATATCTTCCTCCCTTTCA
JMSF009D09+            CCAACATGAATGATGACCCTACATATCCAGCATAATAACTAATATCTTCCTCCCTTTCA
JMSF026B07+           CCCAACATGAATGATGACCCTACATATCCAGCATAATAACTAATATCTTCCTCCCTTTCA
JMSF033J02+           CCCAACATGAATGATGACCCTACATATCCAGCATAATAACTAATATCTTCCTCCCTTTCA
                      ____________________________________________________________
consensus             CCCAACATGAATGATGACCCTACATATCCAGCATAATAACTAATATCTTCCTCCCTTTCA
 
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JMSF043M16+           GCAATGTGAAAGTCCCTAATCATAAAATATAGGAAAGGAAAGAGAGATGATATTGGTAGT
JMSF013J24+           GCAATGTGAAGGTCCCTAATCATAAAATATAGGAAAGGAAAGAGAGATGATATTGGTAGT
JMSF009D09+           GCAATGTGAAAGTCCCTAATCATAAAATATAGGAAAGGAAAGAGAGATGATATTGGTAGT
JMSF026B07+           GCAATGTGAAAGTCCCTAATCATAAAATATAGGAAAGGAAAGAGAGATGATATTGGTAGT
JMSF033J02+           GCAATGTGAAAGTCCCTAATCATAAAATATAGGAAAGGAAAGAGAGATGATATTGGTAGT
                      ____________________________________________________________
consensus             GCAATGTGAAAGTCCCTAATCATAAAATATAGGAAAGGAAAGAGAGATGATATTGGTAGT
 
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JMSF043M16+           GCGGCGCACAGGGTGACCATGGAAATGAAGAAGACGTGCTTGATCGGAACGCCGGCGTCG
JMSF013J24+           GCGGCGCACAGGGTGACCATGGAAATGAAGAAGACGTGCTTGATCGGAACGCCGGCGTCG
JMSF009D09+           GCGGCGCACAGGGTGACCATGGAAATGAAGAAGACGTGCTTGATCGGAACGCCGGCGTCG
JMSF026B07+           GCGGCGCACAGGGTGACCATGGAAATGAAGAAGACGTGCTTGATCGGAACGCCGGCGTCG
JMSF033J02+           GCGGCGCACAGGGTGACCATGGAAATGAAGAAGGCGTGCTTGATCGGAACGCCGGCGTCG
                      ____________________________________________________________
consensus             GCGGCGCACAGGGTGACCATGGAAATGAAGAAGACGTGCTTGATCGGAACGCCGGCGTCG
 
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JMSF043M16+           GCGCGTTTGAGCAGCTCCACTCTGCAACCGGCGCAACTCTCGTCGTAGCAGAAGTACTCG
JMSF013J24+           GCGCGTTTGAGCAGCTCCACTCTGCAACCGGCGCAACTCTCGTCGTAGCAGAAGTACTCG
JMSF009D09+           GCGCGTTTGAGCAGCTCCACTCTGCAACCGGCGCAACTCTCGTCGTAGCAGAAGTACTCG
JMSF026B07+           GCGCGTTTGAGCAGCTCCACTCTGCAACCGGCGCAACTCTCGTCGTAGCAGAAGTACTCG
JMSF033J02+           GCGCGTTTGAGCAGCTCCACTCTGCAACCGGCGCAACTCTCGTCGTAGCAGAAGTACTCG
                      ____________________________________________________________
consensus             GCGCGTTTGAGCAGCTCCACTCTGCAACCGGCGCAACTCTCGTCGTAGCAGAAGTACTCG
 
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JMSF043M16+           TCCTCCAGGTGGCCTCCGTTTTGCTCACTCTGCTTCAACAACGGCTCTGTGTTCCCTTCC
JMSF013J24+           TCCTCCAGGTGGCCTCCGTTTTGCTCACTCTGCTTCAACAACGGCTCTGTGTTCCCTTCC
JMSF009D09+           TCCTCCAGGTGGCCTCCGTTTTGCTCACTCTGCTTCAACAACGGCTCTGTGTTCCCTTCC
JMSF026B07+           TCCTCCAGGTGGCCTCCGTTTTGCTCACTCTGCTTCAACAACGGCTCTGTGTTCCCTTCC
JMSF033J02+           TCCTCCAGGTGGCCTCCGTTTTGCTCACTCTGCTTCAACAACGGCTCTGTGTTCCCTTCC
                      ____________________________________________________________
consensus             TCCTCCAGGTGGCCTCCGTTTTGCTCACTCTGCTTCAACAACGGCTCTGTGTTCCCTTCC
 
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JMSF043M16+           GCCATTGATTCGCTCGCTCGCTCGCTCGCTCGATACGCACACCACTGCT           
JMSF013J24+           GCCATTGATTCGCTCGCTCGCTCGCTCGCTCGATACGCACACCACTGCTAGC        
JMSF009D09+           GCCATTGATTCGCTCGCTCGCTCGCTCGCTCGATACGCACACCACTGCTAGC        
JMSF026B07+           GCCATTGATTCGCTCGCTCGCTCGCTCGCTCGATACGCACACCACTGCTAGC        
JMSF033J02+           GCCATTGATTCGCTCGCTCGCTCGCTCGCTCGATACGCACACCACTGCTAGCTAGTGCTA
                      ____________________________________________________________
consensus             GCCATTGATTCGCTCGCTCGCTCGCTCGCTCGATACGCACACCACTGCTAGCTAGTGCTA
 
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JMSF033J02+           GCTCTCAATGGCGGCACCAATTTATGCACAGAAGAAGAACATGAATCATGAGTGTAGATG
                      ____________________________________________________________
consensus             GCTCTCAATGGCGGCACCAATTTATGCACAGAAGAAGAACATGAATCATGAGTGTAGATG
 
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JMSF033J02+           GCGGGCGGGTGGGAAGGCGATGGGGTCATTATTAGTGATTTATGAATTTCATTTCCCCAG
                      ____________________________________________________________
consensus             GCGGGCGGGTGGGAAGGCGATGGGGTCATTATTAGTGATTTATGAATTTCATTTCCCCAG