Contig 002331:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS056D10Sequence627002331 (5)emb|CDP15242.1|1e-73unnamed protein product [Coffea canephora]
JMSF032P16Sequence654002331 (5)emb|CDP15242.1|2e-61unnamed protein product [Coffea canephora]772002331 (5)emb|CAN61591.1|1e-102hypothetical protein VITISV_030553 [Vitis vinifera]
JMSF042N14Sequence788002331 (5)emb|CAN61591.1|7e-103hypothetical protein VITISV_030553 [Vitis vinifera]841002331 (5)emb|CAN61591.1|7e-113hypothetical protein VITISV_030553 [Vitis vinifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042N14-                             ATTTGTTTGTGTAGAAAGGAAGAAACCTCCTTTAGTTAATA
                      ____________________________________________________________
consensus                                ATTTGTTTGTGTAGAAAGGAAGAAACCTCCTTTAGTTAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-                  ATTACAAGATTATGTTACTCATAAAATTGGCATAGACCAGCTTCATCATTAT
rJMSF042N14-          AGGAATCAATTACAAGATTATGTTACTCATAAAATTGGCATAGACCAGCTTCATCATTAT
                      ____________________________________________________________
consensus             AGGAATCAATTACAAGATTATGTTACTCATAAAATTGGCATAGACCAGCTTCATCATTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          TGTGAATGGTACAAAGGGAATTTCTCATTAGATTTTAGAACTACATACTATTGGAACCAG
rJMSF042N14-          TGTGAATGGTACAAAGGGAATTTCTCATTAGATTTTAGAACTACATACTATTGGAACCAG
                      ____________________________________________________________
consensus             TGTGAATGGTACAAAGGGAATTTCTCATTAGATTTTAGAACTACATACTATTGGAACCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          ATCCACCACTGAGAATATCATCAAGTGAAATATAGCTTATCCCCTTTCTGATAAGTGATG
rJMSF042N14-          ATCCACCACTGAGAATATCATCAAGTGAAATATAGCTTATCCCCTTTCTGATAAGTGATG
                      ____________________________________________________________
consensus             ATCCACCACTGAGAATATCATCAAGTGAAATATAGCTTATCCCCTTTCTGATAAGTGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          GAGCCGCTGCTTCTATAGTATCTTCTGCCAATGTTGTGGTCACTGCTATGCATCGCATTT
rJMSF042N14-          GAGCCGCTGCTTCTATAGTATCTTCTGCCAATGTTGTGGTCACTGCTATGCATCGCATTT
                      ____________________________________________________________
consensus             GAGCCGCTGCTTCTATAGTATCTTCTGCCAATGTTGTGGTCACTGCTATGCATCGCATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          TTGCTGCTTTGGCAGCTTGTATACCAGCTAATGCATCTTCAATCACAACACACTCACTAG
rJMSF042N14-          TTGCTGCTTTGGCAGCTTGTATACCAGCTAATGCATCTTCAATCACAACACACTCACTAG
JMSF042N14+                                                                    TAG
                      ____________________________________________________________
consensus             TTGCTGCTTTGGCAGCTTGTATACCAGCTAATGCATCTTCAATCACAACACACTCACTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          GGGGCACATTCAAAATCTTTGATGCTGCCAAAAATATATCAGGAGCAGGCTTCAAGTTTT
rJMSF042N14-          GGGGCACATTCAAAATCTTTGATGCTGCCAAAAATATATCAGGAGCAGGCTTCAAGTTTT
JMSF042N14+           GGGGCACATTCAAAATCTTTGATGCTGCCAAAAATATATCAGGAGCAGGCTTCAAGTTTT
                      ____________________________________________________________
consensus             GGGGCACATTCAAAATCTTTGATGCTGCCAAAAATATATCAGGAGCAGGCTTCAAGTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          CAAATGCATCAGCAGAAACAATTGCATCAAACATTGACAACGACAAACCAGCAGCTGTTA
rJMSF042N14-          CAAATGCATCAGCAGAAACAATTGCATCAAACATTGACAACGACAAACCAGCAGCTGTTA
JMSF042N14+           CAAATGCATCAGCAGAAACAATTGCATCAAACATTGACAACGACAAACCAGCAGCTGTTA
                      ____________________________________________________________
consensus             CAAATGCATCAGCAGAAACAATTGCATCAAACATTGACAACGACAAACCAGCAGCTGTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          AGTTCGCATCGACCTTGATGCGATCAGCACTTGATGCAACAGCAACTTTGAGACCTTTGC
rJMSF042N14-          AGTTCGCATCGACCTTGATGCGATCAGCACTTGATGCAACAGCAACTTTGAGACCTTTGC
JMFS056D10+                      ACCTTGATGCGATCAGCACTTGATGCAACAGCAACTTTGAGACCTTTGC
JMSF042N14+           AGTTCGCATCGACCTTGATGCGATCAGCACTTGATGCAACAGCAACTTTGAGACCTTTGC
                      ____________________________________________________________
consensus             AGTTCGCATCGACCTTGATGCGATCAGCACTTGATGCAACAGCAACTTTGAGACCTTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          TTTTACACTGAGTGACAAGTTCAAAGGCACCAGGGAAACCTATGCCAGAATTTGGCTTTG
rJMSF042N14-          TTTTACACTGAGTGACAAGTTCAAAGGCACCAGGGAAACCTATGCCAGAATTTGGCTTTG
JMFS056D10+           TTTTACACTGAGTGACAAGTTCAAAGGCACCAGGGAAACCTATGCCAGAATTTGGCTTTG
JMSF042N14+           TTTTACACTGAGTGACAAGTTCAAAGGCACCAGGGAAACCTATGCCAGAATTTGGCTTTG
JMSF032P16+                 ACTGAGTGACAAGTTCAAAGGCACCAGGGAAACCTATGCCAGAATTTGGCTTTG
                      ____________________________________________________________
consensus             TTTTACACTGAGTGACAAGTTCAAAGGCACCAGGGAAACCTATGCCAGAATTTGGCTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          CATACTTATCTAAATATATCTCAAAAAACCTCTTCTTTGCTGCCTCGGGATTGAATCCAA
rJMSF042N14-          CATACTTATCTAAATATATCTCAAAAAACCTCTTCTTTGCTGCCTCGGGATTGAATCCAA
JMFS056D10+           CATACTTATCTAAATATATCTCAAAAAACCTCTTCTTTGCTGCCTCGGGATTGAATCCAA
JMSF042N14+           CATACTTATCTAAATATATCTCAAAAAACCTCTTCTTTGCTGCCTCGGGATTGAATCCAA
JMSF032P16+           CATACTTATCTAAATATATCTCAAAAAACCTCTTCTTTGCTGCCTCGGGATTGAATCCAA
                      ____________________________________________________________
consensus             CATACTTATCTAAATATATCTCAAAAAACCTCTTCTTTGCTGCCTCGGGATTGAATCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          GAACACCCTTCACATTAGCAACACCACCTAAGAAGTTCGCTTCACCCATGCCCGTAAAGG
rJMSF042N14-          GAACACCCTTCACATTAGCAACACCACCTAAGAAGTTCGCTTCACCCATGCCCGTAAAGG
JMFS056D10+           GAACACCCTTCACATTAGCAACACCACCTAAGAAGTTCGCTTCACCCATGCCCGTAAAGG
JMSF042N14+           GAACACCCTTCACATTAGCAACACCACCTAAGAAGTTCGCTTCACCCATGCCCGTAAAGG
JMSF032P16+           GAACACCCTTCACATTAGCAACACCACCTAAGAAGTTCGCTTCACCCATGCCCGTAAAGG
                      ____________________________________________________________
consensus             GAACACCCTTCACATTAGCAACACCACCTAAGAAGTTCGCTTCACCCATGCCCGTAAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          GCGCAAAGTCTTCTACTGTTACTTGAACCCCCATTTCCGCAAAAACATCTACAGCAGCCC
rJMSF042N14-          GCGCAAAGTCTTCTACTGTTACTTGAACCCCCATTTCCGCAAAAACATCTACAGCAGCCC
JMFS056D10+           GCGCAAAGTCTTCTACTGTTACTTGAACCCCCATTTCCGCAAAAACATCTACAGCAGCCC
JMSF042N14+           GCGCAAAGTCTTCTACTGTTACTTGAACCCCCATTTCCGCAAAAACATCTACAGCAGCCC
JMSF032P16+           GCGCAAAGTCTTCTACTGTTACTTGAACCCCCATTTCCGCAAAAACATCTACAGCAGCCC
                      ____________________________________________________________
consensus             GCGCAAAGTCTTCTACTGTTACTTGAACCCCCATTTCCGCAAAAACATCTACAGCAGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032P16-          TTCTAGAAGGCTCCTCGCTGTTGC-AAGCACACCATCCATATCAAACAGCACGGCG    
rJMSF042N14-          TTCTAGAAGGCTCCTCGCTGTTGCAAAGCACACCATCCATATCAAACAGCACGGCGGAAA
JMFS056D10+           TTCTAGAAGGCTCCTCGCTGTTGCAAAGCACACCATCCATATCAAACAGCACGGCGGAGA
JMSF042N14+           TTCTAGAAGGCTCCTCGCTGTTGCAAAGCACACCATCCATATCAAACAGCACGGCGGAGA
JMSF032P16+           TTCTAGAAGGCTCCTCGCTGTTGCAAAGCACACCATCCATATCAAACAGCACGGCGGAGA
                      ____________________________________________________________
consensus             TTCTAGAAGGCTCCTCGCTGTTGCAAAGCACACCATCCATATCAAACAGCACGGCGGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042N14-          CCTT                                                        
JMFS056D10+           CCTTTCCCCATTGATTCCCCGCCTCGGAGACATTAGTCTCCTCCAACTTCACGCACGCAT
JMSF042N14+           CCTTTCCCCATTGATTCCCCGCCTCGGAGACATTAGTCTCCTCCAACTTCACGCACGCAT
JMSF032P16+           CCTTTCCCCATTGATTCCCCGCCTCGGAGACATTAGTCTCCTCCAACTTCACGCACGCAT
                      ____________________________________________________________
consensus             CCTTTCCCCATTGATTCCCCGCCTCGGAGACATTAGTCTCCTCCAACTTCACGCACGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056D10+           TCACCGCCAAACCCGACTTTCTCCGCCCCGAATTCGCGAAATGTTTCGGATAAAATCGGA
JMSF042N14+           TCACCGCCAAACCCGACTTTCTCCGCCCCGAATTCGCGAAATGTTTCGGATAAAATCGGA
JMSF032P16+           TCACCGCCAAACCCGACTTTCTCCGCCCCGAATTCGCGAAATGTTTCGGATAAAATCGGA
                      ____________________________________________________________
consensus             TCACCGCCAAACCCGACTTTCTCCGCCCCGAATTCGCGAAATGTTTCGGATAAAATCGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056D10+           CAAACGACGCCTGTTTGGAGCGAGAGAACTGCGCAAGCTTCGATTGAGAAGAAGAAGAAG
JMSF042N14+           CAAACGACGCCTGTTTGGAGCGAGAGAACTGCGCAAGCTTCGATTGAGAAGAAGAAGAAG
JMSF032P16+           CAAACGACGCCTGTTTGGAGCGAGAGAACTGCGCAAGCTTCGATTGAGAAGAAGAAGAAG
                      ____________________________________________________________
consensus             CAAACGACGCCTGTTTGGAGCGAGAGAACTGCGCAAGCTTCGATTGAGAAGAAGAAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056D10+           AAGAAAGAGTGGACAATGGCGGAGACAATAATAATAGTCTCAGTGCCATTTTTGTGAGGC
JMSF042N14+           AAGAAAGAGTGGACAATGGCGGAGACAATAATAATAGTCTCAGTGCCATTTTTGTGAGGC
JMSF032P16+           AAGAAAGAGTGGACAATGGCGGAGACAATAATAATAGTCTCAGTGCCATTTTTGTGAGGC
                      ____________________________________________________________
consensus             AAGAAAGAGTGGACAATGGCGGAGACAATAATAATAGTCTCAGTGCCATTTTTGTGAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056D10+           CTCAAGCTCCACAGACCACAGTATACTTCTCTGTTTGG                      
JMSF042N14+           CTCAAGCTCCACAGACCACAGTATACTTCTCTGTTTGGCTTTGGCTGAAATGTAAATAAT
JMSF032P16+           CTCAAGCTCCACAGACCACAGTATACTTCTCTGTTTGGCTTTGGCTGAAATGTAAATAAT
                      ____________________________________________________________
consensus             CTCAAGCTCCACAGACCACAGTATACTTCTCTGTTTGGCTTTGGCTGAAATGTAAATAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042N14+           CCT                                                         
JMSF032P16+           CCTGATTCTGTATCGAGTGGCGGGGAAGGGGATTTCAGTTGTATTCCGTGTGATGGGACC
                      ____________________________________________________________
consensus             CCTGATTCTGTATCGAGTGGCGGGGAAGGGGATTTCAGTTGTATTCCGTGTGATGGGACC