Contig 002329:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032L20-                                                     ATCTATTACACTGAAAA
                      ____________________________________________________________
consensus                                                        ATCTATTACACTGAAAA
 
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rJMSF032L20-          TTGGTGCGGCAAAGATGAACCATCCACTGCACAACCTACAATTGAAGCCTTGCCCTGAAT
                      ____________________________________________________________
consensus             TTGGTGCGGCAAAGATGAACCATCCACTGCACAACCTACAATTGAAGCCTTGCCCTGAAT
 
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rJMSF032L20-          ACACATTACCAAACCACCAAACTTTGAGAGGATGTTTGTTTTGAGATCAACACAATCACA
                      ____________________________________________________________
consensus             ACACATTACCAAACCACCAAACTTTGAGAGGATGTTTGTTTTGAGATCAACACAATCACA
 
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rJMSF032L20-          ACCCCACACATCAAAATACCTACTTGAGGACAGGAGTCTATCAGCAGGAGCTTATTCCCT
                      ____________________________________________________________
consensus             ACCCCACACATCAAAATACCTACTTGAGGACAGGAGTCTATCAGCAGGAGCTTATTCCCT
 
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rJMSF032L20-          TCCACCACCGCCACCGCCTTGTCCAGGCGCCAATTTCCCTAGGCCATCACTGGAATTAGC
                      ____________________________________________________________
consensus             TCCACCACCGCCACCGCCTTGTCCAGGCGCCAATTTCCCTAGGCCATCACTGGAATTAGC
 
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rJMSF032L20-          CTCCAAGCCAACCTGCTTGTTTCCTCGCATATCTAGACCACTTGCACCGCTTAGTCCAGG
JMFN010B07+                                                                    AGG
JMSF032L20+                                                                    AGG
                      ____________________________________________________________
consensus             CTCCAAGCCAACCTGCTTGTTTCCTCGCATATCTAGACCACTTGCACCGCTTAGTCCAGG
 
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rJMSF032L20-          TCGCATAAGTTGATGCATGCCATTGTTGACTGTAGCCCCAAAACCC-GGATGGCCTTGAA
JMFN010B07+           TCGCATAAGTTGATGCATGCCATTGTTGACTGTAGCCCCAAAAACCGGGATGGCCTTGAA
JMSF032L20+           TCGCATAAGTTGATGCATGCCATTGTTGACTGTAGCCCCAAAACCC-GGATGGCCTTGAA
                      ____________________________________________________________
consensus             TCGCATAAGTTGATGCATGCCATTGTTGACTGTAGCCCCAAAACCC-GGATGGCCTTGAA
 
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rJMSF032L20-          ATTGTTGTTGTTGCTGCTGCTGCTGCTGAAATTGGAGCAGCTGCTGTTGTTGCTCCTGAG
JMFN010B07+           ATTGTTGTTGTTGCTGCTGCTGCTGCTGAAATTGGAGCAGCTGCTGTTGTTGCTCCTGAG
JMSF032L20+           ATTGTTGTTGTTGCTGCTGCTGCTGCTGAAATTGGAGCAGCTGCTGTTGTTGCTCCTGAG
                      ____________________________________________________________
consensus             ATTGTTGTTGTTGCTGCTGCTGCTGCTGAAATTGGAGCAGCTGCTGTTGTTGCTCCTGAG
 
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rJMSF032L20-          ATGGGAAACCACCGTTAAGCTGGAAGGGCAACTTCGGAACAGCAACTTGTTGCTGTGGCA
JMFN010B07+           ATGGGAAACCACCGTTAAGCTGGAAGGGCAACTTCGGAACAGCAACTTGTTGCTGTGGCA
JMSF032L20+           ATGGGAAACCACCGTTAAGCTGGAAGGGCAACTTCGGAACAGCAACTTGTTGCTGTGGCA
                      ____________________________________________________________
consensus             ATGGGAAACCACCGTTAAGCTGGAAGGGCAACTTCGGAACAGCAACTTGTTGCTGTGGCA
 
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rJMSF032L20-          GTGCAGTGGCTTGAGTTTGCTGCATCGGATTCCCTTGTTGAGGAACAGAACTTGGAGCCT
JMFN010B07+           GTGCAGTGGCTTGAGTTTGCTGCATCGGATTCCCTTGTTGAGGAACAGAACTTGGAGCCT
JMSF032L20+           GTGCAGTGGCTTGAGTTTGCTGCATCGGATTCCCTTGTTGAGGAACAGAACTTGGAGCCT
                      ____________________________________________________________
consensus             GTGCAGTGGCTTGAGTTTGCTGCATCGGATTCCCTTGTTGAGGAACAGAACTTGGAGCCT
 
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rJMSF032L20-          GTGAGGAGTTTGCTGATCCTTGTGGTTGTTGCGCATCAGCAATTGCAGCTAAATACATCA
JMFN010B07+           GTGAGGAGTTTGCTGATCCTTGTGGTTGTTGCGCATCAGCAATTGCAGCTAAATACATCA
JMSF032L20+           GTGAGGAGTTTGCTGATCCTTGTGGTTGTTGCGCATCAGCAATTGCAGCTAAATACATCA
                      ____________________________________________________________
consensus             GTGAGGAGTTTGCTGATCCTTGTGGTTGTTGCGCATCAGCAATTGCAGCTAAATACATCA
 
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rJMSF032L20-          GATTCTTCTGAAGAATGGCTTGATACTGTGCACATTCAGCAAGTTTCCCAAGGTTTTGAT
JMFN010B07+           GATTCTTCTGAAGAATGGCTTGATACTGTGCACATTCAGCAAGTTTCCCAAGGTTTTGAT
JMSF032L20+           GATTCTTCTGAAGAATGGCTTGATACTGTGCACATTCAGCAAGTTTCCCAAGGTTTTGAT
                      ____________________________________________________________
consensus             GATTCTTCTGAAGAATGGCTTGATACTGTGCACATTCAGCAAGTTTCCCAAGGTTTTGAT
 
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rJMSF032L20-          TTTCTAGTATTGCCAAAATCANATTTTTGTTATCATCCAAACACTTTTGAATCTGCTCAG
JMFN010B07+           TTTCTAGTATTGCCAAAATCAGATTTTTGTTATCATCCAAACACTTTTGAATCTGCTCAG
JMSF032L20+           TTTCTAGTATTGCCAAAATCAGATTTTTGTTATCATCCAAACACTTTTGAATCTGCTCAG
                      ____________________________________________________________
consensus             TTTCTAGTATTGCCAAAATCAGATTTTTGTTATCATCCAAACACTTTTGAATCTGCTCAG
 
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rJMSF032L20-          TGGTGACAGCATT                                               
JMFN010B07+           TGGTGACAGCATTAAGCGGAAGCTGAGGAACAGAGTTGAGAGACGGGGTAGGTTGCGGCT
JMSF032L20+           TGGTGACAGCATTAAGCGGAAGCTGAGGAACAGAGTTGAGAGACGGGGTAGGTTGCGGCT
                      ____________________________________________________________
consensus             TGGTGACAGCATTAAGCGGAAGCTGAGGAACAGAGTTGAGAGACGGGGTAGGTTGCGGCT
 
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JMFN010B07+           GCATTTTTTACAAGAGTCCGAGGTTGGGGTACGAGAAAACCCTGTAAAGTTCGAGAAGGG
JMSF032L20+           GCATTTTTTACAAGAGTCCGAGGTTGGGGTACGAGAAAACCCTGTAAAGTTCGAGAAGGG
                      ____________________________________________________________
consensus             GCATTTTTTACAAGAGTCCGAGGTTGGGGTACGAGAAAACCCTGTAAAGTTCGAGAAGGG
 
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JMFN010B07+           ATTTGAAAATTTTTGCAGATTTACGAGAATGCAGTGCTACAAAATCGCTGGAGGGGACAG
JMSF032L20+           ATTTGAAAATTTTTGCAGATTTACGAGAATGCAGTGCTACAAAATCGCTGGAGGGGACAG
                      ____________________________________________________________
consensus             ATTTGAAAATTTTTGCAGATTTACGAGAATGCAGTGCTACAAAATCGCTGGAGGGGACAG
 
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JMFN010B07+           GGGTGAGGCCGTGAGGTTTTA                                       
JMSF032L20+           GGGTGAGGCCGTGAGGTTTTAGGGAATTAGGGCTTCGTGAAAGGAGGGAGAAGGCAGCTC
                      ____________________________________________________________
consensus             GGGTGAGGCCGTGAGGTTTTAGGGAATTAGGGCTTCGTGAAAGGAGGGAGAAGGCAGCTC