Contig 002327:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015P03Sequence481002327 (3)ref|XP_011099557.1|1e-81PREDICTED: 4-coumarate--CoA ligase-like 5 [Sesamum indicum]742001328 (3)ref|XP_004253129.1|3e-128PREDICTED: 4-coumarate--CoA ligase-like 5 [Solanum lycopersicum]
JMSF032I06Sequence685002327 (3)gb|EYU17530.1|3e-121hypothetical protein MIMGU_mgv1a003887mg [Erythranthe guttata]718001328 (3)ref|XP_004253129.1|1e-112PREDICTED: 4-coumarate--CoA ligase-like 5 [Solanum lycopersicum]
JMSF037J02Sequence683002327 (3)gb|EYU17530.1|3e-121hypothetical protein MIMGU_mgv1a003887mg [Erythranthe guttata]696001328 (3)ref|XP_004253129.1|2e-117PREDICTED: 4-coumarate--CoA ligase-like 5 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF037J02+                                                GACCATCGCGATTAGGTTTCTGT
JMSF032I06+                                              TGGACCATCGCGATTAGGTTTCTGT
                      ____________________________________________________________
consensus                                                TGGACCATCGCGATTAGGTTTCTGT
 
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JMSF037J02+           GCGAGGAGACCACACCCTTGCTAGCCCCGGTGGTGCCGGAGGAGTACAGGAGAGTCGCCG
JMSF032I06+           GCGAGGAGACCACACCCTTGCTAGCCCCGGTGGTGCCGGAGGAGTACAGGAGAGTCGCCG
                      ____________________________________________________________
consensus             GCGAGGAGACCACACCCTTGCTAGCCCCGGTGGTGCCGGAGGAGTACAGGAGAGTCGCCG
 
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JMSF037J02+           TGTCGTCCTGAGTGACCCTTTCTTTGAAGCGAGTCTGACTCGGCGCCTTTTTCATCATCT
JMSF032I06+           TGTCGTCCTGAGTGACCCTTTCTTTGAAGCGAGTCTGACTCGGCGCCTTTTTCATCATCT
                      ____________________________________________________________
consensus             TGTCGTCCTGAGTGACCCTTTCTTTGAAGCGAGTCTGACTCGGCGCCTTTTTCATCATCT
 
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JMSF037J02+           CTTCCAGTCTACTCACGATCCTCAGGTTGGTTTTCGGTGTAGAACTGGAATCTCCTCCGA
JMSF015P03+                                                                      A
JMSF032I06+           CTTCCAGTCTACTCACGATCCTCAGGTTGGTTTTCGGTGTAGAACTGGAATCTCCTCCGA
                      ____________________________________________________________
consensus             CTTCCAGTCTACTCACGATCCTCAGGTTGGTTTTCGGTGTAGAACTGGAATCTCCTCCGA
 
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JMSF037J02+           TGAGCACCACAGGGAGATTCGAATCGGCTAGTTTTGGGAGAAGTTCAGTAACAGTGAAAG
JMSF015P03+           TGAGCACCACAGGGAGATTCGAATCGGCTAGTTTTGGGAGAAGTTCAGTAACAGTGAAAG
JMSF032I06+           TGAGCACCACAGGGAGATTCGAATCGGCTAGTTTTGGGAGAAGTTCAGTAACAGTGAAAG
                      ____________________________________________________________
consensus             TGAGCACCACAGGGAGATTCGAATCGGCTAGTTTTGGGAGAAGTTCAGTAACAGTGAAAG
 
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JMSF037J02+           CGAGAACCGGTTTCGAATCAGAGATCTGTTTGCCGATTTCGCGGGGGGTGTTGAGTGGAT
JMSF015P03+           CGAGAACCGGTTTCGAATCAGAGATCTGTTNNCCGATTTCGCGGGGGGTGTTGAGTGGAT
JMSF032I06+           CGAGAACCGGTTTCGAATCAGAGATCTGTTTGCCGATTTCGCGGGGGGTGTTGAGTGGAT
                      ____________________________________________________________
consensus             CGAGAACCGGTTTCGAATCAGAGATCTGTTTGCCGATTTCGCGGGGGGTGTTGAGTGGAT
 
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JMSF037J02+           TAGTGGTAGTTATAACGGCGCCGAGGGACATTACGGCGAGGCAGATGATGGGGAAGAAGA
JMSF015P03+           TAGTGGTAGTTATAACGGCGCCGAGGGACATTACGGCGAGGCAGATGATGGGGAAGAAGA
JMSF032I06+           TAGTGGTAGTTATAACGGCGCCGAGGGACATTACGGCGAGGCAGATGATGGGGAAGAAGA
                      ____________________________________________________________
consensus             TAGTGGTAGTTATAACGGCGCCGAGGGACATTACGGCGAGGCAGATGATGGGGAAGAAGA
 
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JMSF037J02+           TGGAATTGGGAGAAAGTAGAAGCACAACGTGACCCTTACGTATGCCCATGTCAAGGGAGA
JMSF015P03+           TGGAATTGGGAGAAAGTAGAAGCACAACGTGACCCTTACGTATGCCCATGTCAAGGGAGA
JMSF032I06+           TGGAATTGGGAGAAAGTAGAAGCACAACGTGACCCTTACGTATGCCCATGTCAAGGGAGA
                      ____________________________________________________________
consensus             TGGAATTGGGAGAAAGTAGAAGCACAACGTGACCCTTACGTATGCCCATGTCAAGGGAGA
 
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JMSF037J02+           GAGACGTCGCCACCGACTCCACTGCTCTCCAAACGTCGGAAAAGCTGAGCTGGCGACCGG
JMSF015P03+           GAGACGTCGCCACCGACTCCACTGCTCTCCAAACGTCGGAAAAGCTGAGCTGGCGACCGG
JMSF032I06+           GAGACGTCGCCACCGACTCCACTGCTCTCCAAACGTCGGAAAAGCTGAGCTGGCGACCGG
                      ____________________________________________________________
consensus             GAGACGTCGCCACCGACTCCACTGCTCTCCAAACGTCGGAAAAGCTGAGCTGGCGACCGG
 
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JMSF037J02+           TGGCGGCGTCGATGAAGGCAATCTTCCCCTGGTGGGCACGCGACGATATGAAAGTCGTCA
JMSF015P03+           TGGCGGCGTCGATGAAGGCAATCTTCCCCTGGTGGGCACGCGACGATATGAAAGTCGTCA
JMSF032I06+           TGGCGGCGTCGATGAAGGCAATCTTCCCCTGGTGGGCACGCGACGATATGAAAGTCGTCA
                      ____________________________________________________________
consensus             TGGCGGCGTCGATGAAGGCAATCTTCCCCTGGTGGGCACGCGACGATATGAAAGTCGTCA
 
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JMSF037J02+           CATCTATCGAGTGGGTGGACGGAAGAGGGATAGGGTTCCGCTTACTGTAGAAAGTTGAGT
JMSF015P03+           CATCTATCGAGTGGGTGGACGGAAGAGGGATAGGGTTCCGCTTACTGTAGAAAGTTGAGT
JMSF032I06+           CATCTATCGAGTGGGTGGACGGAAGAGGGATAGGGTTCCGCTTACTGTAGAAAGTTGAGT
                      ____________________________________________________________
consensus             CATCTATCGAGTGGGTGGACGGAAGAGGGATAGGGTTCCGCTTACTGTAGAAAGTTGAGT
 
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JMSF037J02+           TGGATGTACAGAAGCCGCTGCGTGAGTCGACGGTGATCTGGGAAGCCATGGCTGAGTACC
JMSF015P03+           TGGATGTACAGAAGCCGCTGCGTGAGTCGACGGTGATCTGGGAAGCCATGGCTGAGTACC
JMSF032I06+           TGGATGTACAGAAGCCGCTGCGTGAGTCGACGGTGATCTGGGAAGCCATGGCTGAGTACC
                      ____________________________________________________________
consensus             TGGATGTACAGAAGCCGCTGCGTGAGTCGACGGTGATCTGGGAAGCCATGGCTGAGTACC