Contig 002325:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008D24Sequence481002325 (5)ref|XP_011094613.1|124PREDICTED: uncharacterized protein LOC105174269 [Sesamum indicum]
JMFN038F02Sequence486002325 (5)ref|XP_011094613.1|124PREDICTED: uncharacterized protein LOC105174269 [Sesamum indicum]
JMSF021A04Sequence484002325 (5)ref|XP_011094613.1|124PREDICTED: uncharacterized protein LOC105174269 [Sesamum indicum]
JMSF032F09Sequence483002325 (5)ref|XP_011094613.1|125PREDICTED: uncharacterized protein LOC105174269 [Sesamum indicum]437002325 (5)ref|XP_011094613.1|125PREDICTED: uncharacterized protein LOC105174269 [Sesamum indicum]

Alignment

This contig is upended


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JMFN008D24+                                                         ATATAAGCCCATCT
JMFN038F02+                                                         ATATAAGCCCATCT
                      ____________________________________________________________
consensus                                                           ATATAAGCCCATCT
 
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JMFN008D24+           CTATGATGACAGACCAATTTGGATAACTTCAATAGTGTTTGTGCAACATTACAAATGTAC
JMFN038F02+           CTATGATGACAGACCAATTTGGATAACTTCAATAGTGTTTGTGCAACATTACAAATGTAC
JMSF021A04+                    CAGACCAATTTGGATAACTTCAATAGTGTTTGTGCAACATTACAAATGTAC
rJMSF032F09-                                                                  GTAC
JMSF032F09+                    CAGACCAATTTGGATAACTTCAATAGTGTTTGTGCAACATTACAAATGTAC
                      ____________________________________________________________
consensus             CTATGATGACAGACCAATTTGGATAACTTCAATAGTGTTTGTGCAACATTACAAATGTAC
 
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JMFN008D24+           TCAAACCATAAAACAGTATTTGTTTTGAACTTTTAGTACTAAAGAGATCTCACAATGCAA
JMFN038F02+           TCAAACCATAAAACAGTATTTGTTTTGAACTTTTAGTACTAAAGAGATCTCACAATGCAA
JMSF021A04+           TCAAACCATAAAACAGTATTTGTTTTGAACTTTTAGTACTAAAGAGATCTCACAATGCAA
rJMSF032F09-          TCAAACCATAAAACAGTATTTGTTTTGAACTTTTAGTACTAAAGAGATCTCACAATGCAA
JMSF032F09+           TCAAACCATAAAACAGTATTTGTTTTGAACTTTTAGTACTAAAGAGATCTCACAATGCAA
                      ____________________________________________________________
consensus             TCAAACCATAAAACAGTATTTGTTTTGAACTTTTAGTACTAAAGAGATCTCACAATGCAA
 
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JMFN008D24+           AAACAGTTGTTTCAAATTGTTTTGGCAAGGATGTTGGATCTATTTAAAGAACACTGGCCA
JMFN038F02+           AAACAGTTGTTTCAAATTGTTTTGGCAAGGATGTTGGATCTATTTAAAGAACACTGGCCA
JMSF021A04+           AAACAGTTGTTTCAAATTGTTTTGGCAAGGATGTTGGATCTATTTAAAGAACACTGGCCA
rJMSF032F09-          AAACAGTTGTTTCAAATTGTTTTGGCAAGGATGTTGGATCTATTTAAAGAACACTGGCCA
JMSF032F09+           AAACAGTTGTTTCAAATTGTTTTGGCAAGGATGTTGGATCTATTTAAAGAACACTGGCCA
                      ____________________________________________________________
consensus             AAACAGTTGTTTCAAATTGTTTTGGCAAGGATGTTGGATCTATTTAAAGAACACTGGCCA
 
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JMFN008D24+           GTTGAAGTAGTAGTTCTCTCTAAATTCCTCGGACGTTTTATTCCACTCAAACCTATGTGG
JMFN038F02+           GTTGAAGTAGTAGTTCTCTCTAAATTCCTCGGACGTTTTATTCCACTCAAACCTATGTGG
JMSF021A04+           GTTGAAGTAGTAGTTCTCTCTAAATTCCTCGGACGTTTTATTCCACTCAAACCTATGTGG
rJMSF032F09-          GTTGAAGTAGTAGTTCTCTCTAAATTCCTCGGACGTTTTATTCCACTCAAACCTATGTGG
JMSF032F09+           GTTGAAGTAGTAGTTCTCTCTAAATTCCTCGGACGTTTTATTCCACTCAAACCTATGTGG
                      ____________________________________________________________
consensus             GTTGAAGTAGTAGTTCTCTCTAAATTCCTCGGACGTTTTATTCCACTCAAACCTATGTGG
 
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JMFN008D24+           CTTATTCTTGTCGCGTGCTCGTTTCCAGTGATGATGCTCATAAAGCATTGCTTTATCATG
JMFN038F02+           CTTATTCTTGTCGCGTGCTCGTTTCCAGTGATGATGCTCATAAAGCATTGCTTTATCATG
JMSF021A04+           CTTATTCTTGTCGCGTGCTCGTTTCCAGTGATGATGCTCATAAAGCATTGCTTTATCATG
rJMSF032F09-          CTTATTCTTGTCGCGTGCTCGTTTCCAGTGATGATGCTCATAAAGCATTGCTTTATCATG
JMSF032F09+           CTTATTCTTGTCGCGTGCTCGTTTCCAGTGATGATGCTCATAAAGCATTGCTTTATCATG
                      ____________________________________________________________
consensus             CTTATTCTTGTCGCGTGCTCGTTTCCAGTGATGATGCTCATAAAGCATTGCTTTATCATG
 
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JMFN008D24+           ATAATTATCATCAGTGGTGAAATGCCAAATGTAGGGATTAACCCAGGTGACAGCAGAGAA
JMFN038F02+           ATAATTATCATCAGTGGTGAAATGCCAAATGTAGGGATTAACCCAGGTGACAGCAGAGAA
JMSF021A04+           ATAATTATCATCAGTGGTGAAATGCCAAATGTAGGGATTAACCCAGGTGACAGCAGAGAA
rJMSF032F09-          ATAATTATCATCAGTGGTGAAATGCCAAATGTAGGGATTAACCCAGGTGACAGCAGAGAA
JMSF032F09+           ATAATTATCATCAGTGGTGAAATGCCAAATGTAGGGATTAACCCAGGTGACAGCAGAGAA
                      ____________________________________________________________
consensus             ATAATTATCATCAGTGGTGAAATGCCAAATGTAGGGATTAACCCAGGTGACAGCAGAGAA
 
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JMFN008D24+           AGCAGCGGCGCCGGCCCAAGCGCCCCAGAAGTCCATCGGGTTGCAGTGGGGAACTCCCGG
JMFN038F02+           AGCAGCGGCGCCGGCCCAAGCGCCCCAGAAGTCCATCGGGTTGCAGTGGGGAACTCCCGG
JMSF021A04+           AGCAGCGGCGCCGGCCCAAGCGCCCCAGAAGTCCATCGGGTTGCAGTGGGGAACTCCCGG
rJMSF032F09-          AGCAGCGGCGCCGGCCCAAGCGCCCCAGAAGTCCATCGGGTTGCAGTGGGGAACTCCCGG
JMSF032F09+           AGCAGCGGCGCCGGCCCAAGCGCCCCAGAAGTCCATCGGGTTGCAGTGGGGAACTCCCGG
                      ____________________________________________________________
consensus             AGCAGCGGCGCCGGCCCAAGCGCCCCAGAAGTCCATCGGGTTGCAGTGGGGAACTCCCGG
 
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JMFN008D24+           GTCGCCCCGGTAAGCATTTCCGAAATACTTCTCCATCTCCGCCTTTG             
JMFN038F02+           GTCGCCCCGGTAAGCATTTCCGAAATACTTCTCCATCTCCGCCTTTGCTGTG        
JMSF021A04+           GTCGCCCCGGTAAGCATTTCCGAAATACTTCTCCATCTCCGCCTTTGCTGTG        
rJMSF032F09-          GTCGCCCCGGTAAGCATTTCCGAAATACTTCTCCATCTCCGCCTTTGCTGTGTG      
JMSF032F09+           GTCGCCCCGGTAAGCATTTCCGAAATACTTCTCCATCTCCGCCTTTGCTGTGTGGCTGTC
                      ____________________________________________________________
consensus             GTCGCCCCGGTAAGCATTTCCGAAATACTTCTCCATCTCCGCCTTTGCTGTGTGGCTGTC