| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF041P13 | Sequence | 646 | 002319 (4) | ref|XP_006366870.1| | 1e-26 | PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Sol | 630 | 018058 | emb|CBI28125.3| | 1e-57 | unnamed protein product [Vitis vinifera] |
| JMFS052D11 | Sequence | 628 | 002319 (4) | ref|XP_006366870.1| | 1e-23 | PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Sol | |||||
| JMSF027N17 | Sequence | 636 | 002319 (4) | ref|XP_006366870.1| | 2e-35 | PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Sol | 757 | 004301 (4) | emb|CDP20806.1| | 9e-89 | unnamed protein product [Coffea canephora] |
| JMSF032B02 | Sequence | 707 | 002319 (4) | ref|XP_006366870.1| | 9e-25 | PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Sol | 762 | 004301 (4) | emb|CDP20806.1| | 8e-83 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF027N17+ AATCCAAATGAATCAATAAATGAAT
____________________________________________________________
consensus AATCCAAATGAATCAATAAATGAAT
. : . : . : . : . : . :
JMSF027N17+ CAGAACGCTTTGGCTTCCAATCAAGCATCATCCACTGCTTTTCAGCAGCCAAGAAAATAG
JMFS052D11+ AGCAGCCAAGAAAATAG
JMFF041P13+ CATCCACTGCTTTTCAGCAGCCAAGAAAATAG
____________________________________________________________
consensus CAGAACGCTTTGGCTTCCAATCAAGCATCATCCACTGCTTTTCAGCAGCCAAGAAAATAG
. : . : . : . : . : . :
JMSF027N17+ TTGTTATGGCAGCAAGAAGCATGCTCCAGTCAGGCAACTGATTGATAAAGGTCCTTGGTG
JMFS052D11+ TTGTTATGGCAGCAAGAAGCATGCTCCAGTCAGGCAACTGATTGATAAAGGTCCTTGGTG
JMFF041P13+ TTGTTATGGCAGCAAGAAGCATGCTCCAGTCAGGCAACTGATTGATAAAGGTCCTTGGTG
JMSF032B02+ AAGAAGCATGCTCCAGTCAGGCAACTGATTGATAAAGGTCCTTGGTG
____________________________________________________________
consensus TTGTTATGGCAGCAAGAAGCATGCTCCAGTCAGGCAACTGATTGATAAAGGTCCTTGGTG
. : . : . : . : . : . :
JMSF027N17+ AAGATGATGAAATCACCTCATCATCCATGAAACCCATCTTGGATCGGTGTACTTTGGGAG
JMFS052D11+ AAGATGATGAAATCACCTCATCATCCATGAAACCCATCTTGGATCGGTGTACTTTGGGAG
JMFF041P13+ AAGATGATGAAATCACCTCATCATCCATGAAACCCATCTTGGATCGGTGTACTTTGGGAG
JMSF032B02+ AAGATGATGAAATCACCTCATCATCCATGAAACCCATCTTGGATCGGTGTACTTTGGGAG
____________________________________________________________
consensus AAGATGATGAAATCACCTCATCATCCATGAAACCCATCTTGGATCGGTGTACTTTGGGAG
. : . : . : . : . : . :
JMSF027N17+ GTGCTTGTGTGTTGACCTTCACTTGCATGTTTGCAGAAGGAGAGGGTTTTGACTTCAAGC
JMFS052D11+ GTGCTTGTGTGTTGACCTTCACTTGCATGTTTGCAGAAGGAGAGGGTTTTGACTTCAAGC
JMFF041P13+ GTGCTTGTGTGTTGACCTTCACTTGCATGTTTGCAGAAGGAGAGGGTTTTGACTTCAAGC
JMSF032B02+ GTGCTTGTGTGTTGACCTTCACTTGCATGTTTGCAGAAGGAGAGGGTTTTGACTTCAAGC
____________________________________________________________
consensus GTGCTTGTGTGTTGACCTTCACTTGCATGTTTGCAGAAGGAGAGGGTTTTGACTTCAAGC
. : . : . : . : . : . :
JMSF027N17+ CCCGTGCATCTATACTTGCAGGCACAGTTCCTCCAAGCTGCTTTCCAGATGTTTTTGCAT
JMFS052D11+ CCCGTGCATCTATACTTGCAGGCACAGTTCCTCCAAGCTGCTTTCCAGATGTTTTTGCAT
JMFF041P13+ CCCGTGCATCTATACTTGCAGGCACAGTTCCTCCAAGCTGCTTTCCAGATGTTTTTGCAT
JMSF032B02+ CCCGTGCATCTATACTTGCAGGCACAGTTCCTCCAAGCTGCTTTCCAGATGTTTTTGCAT
____________________________________________________________
consensus CCCGTGCATCTATACTTGCAGGCACAGTTCCTCCAAGCTGCTTTCCAGATGTTTTTGCAT
. : . : . : . : . : . :
JMSF027N17+ CAGATTTGGGGCGTGGCTTGTCGATAGGGGAAAATGCAGCACTAGCAGCAGTTGCAACCA
JMFS052D11+ CAGATTTGGGGCGTGGCTTGTCGATAGGGGAAAATGCAGCACTAGCAGCAGTTGCAACCA
JMFF041P13+ CAGATTTGGGGCGTGGCTTGTCGATAGGGGAAAATGCAGCACTAGCAGCAGTTGCAACCA
JMSF032B02+ CAGATTTGGGGCGTGGCTTGTCGATAGGGGAAAATGCAGCACTAGCAGCAGTTGCAACCA
____________________________________________________________
consensus CAGATTTGGGGCGTGGCTTGTCGATAGGGGAAAATGCAGCACTAGCAGCAGTTGCAACCA
. : . : . : . : . : . :
JMSF027N17+ TGATTAATTATGACACCTCAACAGTCAGTGCAGCTTTTTCAGCATAAAATCCTCTAGAAT
JMFS052D11+ TGATTAATTATGACACCTCAACAGTCAGTGCAGCTTTTTCAGCATAAAATCCTCTAGAAT
JMFF041P13+ TGATTAATTATGACACCTCAACAGTCAGTGCAGCTTTTTCAGCATAAAATCCTCTAGAAT
JMSF032B02+ TGATTAATTATGACACCTCAACAGTCAGTGCAGCTTTTTCAGCATAAAATCCTCTAGAAT
____________________________________________________________
consensus TGATTAATTATGACACCTCAACAGTCAGTGCAGCTTTTTCAGCATAAAATCCTCTAGAAT
. : . : . : . : . : . :
JMSF027N17+ ACACTGGAACGCGTACAGGTACAACTATTACACGTTTGCGTACAAATTGATGCAAAGTGT
JMFS052D11+ ACACTGGAACGCGTACAGGTACAACTATTACACGTTTGCGTACAAATTGATGCAAAGTGT
JMFF041P13+ ACACTGGAACGCGTACAGGTACAACTATTACACGTTTGCGTACAAATTGATGCAAAGTGT
JMSF032B02+ ACACTGGAACGCGTACAGGTACAACTATTACACGTTTGCGTACAAATTGATGCAAAGTGT
____________________________________________________________
consensus ACACTGGAACGCGTACAGGTACAACTATTACACGTTTGCGTACAAATTGATGCAAAGTGT
. : . : . : . : . : . :
JMSF027N17+ GTAGGTAACAGGAGACAGCTTTTCTACGATCAGCAAACCCGTGCGAAGTAGGGATTCTAG
JMFS052D11+ GTAGGTAACAGGAGACAGCTTTTCTACGATCAGCAAACCCGTGCGAAGTAGGGATTCTAG
JMFF041P13+ GTAGGTAACAGGAGACAGCTTTTCTACGATCAGCAAACCCGTGCGAAGTAGGGATTCTAG
JMSF032B02+ GTAGGTAACAGGAGACAGCTTTTCTACGATCAGCAAACCCGTGCGAAGTAGGGATTCTAG
____________________________________________________________
consensus GTAGGTAACAGGAGACAGCTTTTCTACGATCAGCAAACCCGTGCGAAGTAGGGATTCTAG
. : . : . : . : . : . :
JMSF027N17+ GGTTTGCAATCGTGAGTTTTCTCCTTTCCCTCGTCCCCTTATCGTCGAATTGGAGAAACT
JMFS052D11+ GGTTTGCAATCGTGAGTTTTCTCCTTTCCCTCGTCCCCTTATCGTCGAATTGGAGAAACT
JMFF041P13+ GGTTTGCAATCGTGAGTTTTCTCCTTTCCCTCGTCCCCTTATCGTCGAATTGGAGAAACT
JMSF032B02+ GGTTTGCAATCGTGAGTTTTCTCCTTTCCCTCGTCCCCTTATCGTCGAATTGGAGAAACT
____________________________________________________________
consensus GGTTTGCAATCGTGAGTTTTCTCCTTTCCCTCGTCCCCTTATCGTCGAATTGGAGAAACT
. : . : . : . : . : . :
JMSF027N17+ TTTACTCCG
JMFS052D11+ TTTACTCCGTACAATCTTTGAACATTCAAGAAATTTCTTTCCAGAAAAGAATATGAGAGA
JMFF041P13+ TTTACTCCGTACAATCTTTGAACATTCAAGAAATTTCTTTCCAGAAAAGAATATGAGAGA
JMSF032B02+ TTTACTCCGTACAATCTTTGAACATTCAAGAAATTTCTTTCCAGAAAAGAATATGAGAGA
____________________________________________________________
consensus TTTACTCCGTACAATCTTTGAACATTCAAGAAATTTCTTTCCAGAAAAGAATATGAGAGA
. : . : . : . : . : . :
JMFS052D11+ GAAAATTGGAG
JMFF041P13+ GAAAATTGGAG
JMSF032B02+ GAAAATTGGAGACGGAAAACCAGCGGCTTTTTCGGTGTTGGAGAGATTAGAGTCCAGCTA
____________________________________________________________
consensus GAAAATTGGAGACGGAAAACCAGCGGCTTTTTCGGTGTTGGAGAGATTAGAGTCCAGCTA
. : . : . : . : . : . :
JMSF032B02+ ATTTCACTTGTATATATACACGGGTTTCCGACAGGTGTTGGATTCTAGAAAAAGCTACTC
____________________________________________________________
consensus ATTTCACTTGTATATATACACGGGTTTCCGACAGGTGTTGGATTCTAGAAAAAGCTACTC