Contig 002314:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031F18Sequence431002314 (2)674002314 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF031F18- ACATTATCAATCAACGNTTAAGTTAAAGTAATAATACATTATCAATCCACAACAATA
                      ____________________________________________________________
consensus ACATTATCAATCAACGNTTAAGTTAAAGTAATAATACATTATCAATCCACAACAATA
 
. : . : . : . : . : . :
rJMSF031F18- TAATAGTTTTCACAAATTACAATCCACATTAAGATCAATTAGGTTGGGATGGAGGTGATG
                      ____________________________________________________________
consensus TAATAGTTTTCACAAATTACAATCCACATTAAGATCAATTAGGTTGGGATGGAGGTGATG
 
. : . : . : . : . : . :
rJMSF031F18- ATGATCAGCTCTCCTGCCATCAATAGCATCAAATTCAATGGCAGAGGGAAACTATCTAAC
                      ____________________________________________________________
consensus ATGATCAGCTCTCCTGCCATCAATAGCATCAAATTCAATGGCAGAGGGAAACTATCTAAC
 
. : . : . : . : . : . :
rJMSF031F18- TCACCCACATGCTTACTGCATCAGTGTATTCAGGAAGGGATGGAGAGCTGCCTGATGGGC
                      ____________________________________________________________
consensus TCACCCACATGCTTACTGCATCAGTGTATTCAGGAAGGGATGGAGAGCTGCCTGATGGGC
 
. : . : . : . : . : . :
rJMSF031F18- GTTTGAGAACCAATTATACTAAATCAAGAATATTAGGCTATGTATGTCATTCCTTGAGTA
                      ____________________________________________________________
consensus GTTTGAGAACCAATTATACTAAATCAAGAATATTAGGCTATGTATGTCATTCCTTGAGTA
 
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rJMSF031F18- TGTGTCAAGACATTCACCAAAAGCTGAGAACAATCCACTCCTTCAGCAAAAATCATCAGT
                      ____________________________________________________________
consensus TGTGTCAAGACATTCACCAAAAGCTGAGAACAATCCACTCCTTCAGCAAAAATCATCAGT
 
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rJMSF031F18- GAATTCCCATATCGGTTATGTTCCTCACCTATCGGAGCTTTGACACAGACATACCATCTG
                      ____________________________________________________________
consensus GAATTCCCATATCGGTTATGTTCCTCACCTATCGGAGCTTTGACACAGACATACCATCTG
 
. : . : . : . : . : . :
rJMSF031F18- GGAGACTATGAATACTTAGAGTCTTGAAATTTTGGAGCCTGGACTCTGGAGAAACACACA
                      ____________________________________________________________
consensus GGAGACTATGAATACTTAGAGTCTTGAAATTTTGGAGCCTGGACTCTGGAGAAACACACA
 
. : . : . : . : . : . :
rJMSF031F18- ACAAGCAGCAAGTTCTGCATTTTTTTATAAAAATAAAATTCGTGCGATTTTTTTTTTTTA
JMSF031F18+ TTTTTTTTTTA
                      ____________________________________________________________
consensus ACAAGCAGCAAGTTCTGCATTTTTTTATAAAAATAAAATTCGTGCGATTTTTTTTTTTTA
 
. : . : . : . : . : . :
rJMSF031F18- ATATATAAATCAAAGTGAACAATTAAACAATTACNCAAATAACAAATTAAAAATTATCAA
JMSF031F18+ ATATATAAATCAAAGTGAACAATTAAACAATTACTCAAATAACAAATTAAAAATTATCAA
                      ____________________________________________________________
consensus ATATATAAATCAAAGTGAACAATTAAACAATTACTCAAATAACAAATTAAAAATTATCAA
 
. : . : . : . : . : . :
rJMSF031F18- ATTAGTATGTATGCAACTTCCCTTTGAAAGAATGAAAGCTTTTGATTTGAGGCGTTGAGG
JMSF031F18+ ATTAGTATGTATGCAACTTCCCTTTGAAAGAATGAAAGCTTTTGATTTGAGGCGTTGAGG
                      ____________________________________________________________
consensus ATTAGTATGTATGCAACTTCCCTTTGAAAGAATGAAAGCTTTTGATTTGAGGCGTTGAGG
 
. : . : . : . : . : . :
rJMSF031F18- GCGAACCGCGAGCAAGC
JMSF031F18+ GCGAACCGCGAGCAAGCAGTGTCTCAGAGACTCAGAGATGTGAGGGCGTGACTCAGGCGA
                      ____________________________________________________________
consensus GCGAACCGCGAGCAAGCAGTGTCTCAGAGACTCAGAGATGTGAGGGCGTGACTCAGGCGA
 
. : . : . : . : . : . :
JMSF031F18+ AGAGGAGCGGCGACCGGCAACTCCGGGCTTCGGCGAGGCCTGAGAACTGAGAAGACGAGG
                      ____________________________________________________________
consensus AGAGGAGCGGCGACCGGCAACTCCGGGCTTCGGCGAGGCCTGAGAACTGAGAAGACGAGG
 
. : . : . : . : . : . :
JMSF031F18+ GAGGCTTGCTTCACTGCGTGAGAACTGAGAAGATTTAGAAGACGAGCGGCGAAGCGAGGC
                      ____________________________________________________________
consensus GAGGCTTGCTTCACTGCGTGAGAACTGAGAAGATTTAGAAGACGAGCGGCGAAGCGAGGC
 
. : . : . : . : . : . :
JMSF031F18+ TTGAGAACTGAGAAGACGAGCGGCGAGAACTGCTTGAGAACTAAGAACACGAGCATAGCG
                      ____________________________________________________________
consensus TTGAGAACTGAGAAGACGAGCGGCGAGAACTGCTTGAGAACTAAGAACACGAGCATAGCG
 
. : . : . : . : . : . :
JMSF031F18+ ACTCCGATTCCGGCGAGGCTGAGACTGAGAGCGGGAGGGAGAGGCAGAACGGAGATGCTC
                      ____________________________________________________________
consensus ACTCCGATTCCGGCGAGGCTGAGACTGAGAGCGGGAGGGAGAGGCAGAACGGAGATGCTC