| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF012E09 | Sequence | 252 | 002313 (5) | ref|XP_009609209.1| | 2e-04 | PREDICTED: ABC transporter I family member 17 [Nicotiana tomentosiformis] | 768 | 002313 (5) | ref|XP_011073244.1| | 3e-121 | PREDICTED: ABC transporter I family member 17-like [Sesamum indicum] |
| JMSF019A04 | Sequence | 306 | 002313 (5) | ref|XP_009609209.1| | 7e-15 | PREDICTED: ABC transporter I family member 17 [Nicotiana tomentosiformis] | 726 | 002313 (5) | ref|XP_011082719.1| | 9e-120 | PREDICTED: ABC transporter I family member 17-like [Sesamum indicum] |
| JMSF031E01 | Sequence | 644 | 002313 (5) | ref|XP_004235874.1| | 1e-54 | PREDICTED: ABC transporter I family member 17 [Solanum lycopersicum] | 634 | 007156 (2) | ref|XP_010322648.1| | 2e-62 | PREDICTED: LOW QUALITY PROTEIN: ABC transporter I family member 17-like [Solanu |
This contig is upended
. : . : . : . : . : . :
rJMSF019A04- GTGTTTTTGTT
rJMSF012E09- CAGATATTACAGGAGAGGATACAGTTCTAACAAGGTGTTTTTGTT
____________________________________________________________
consensus CAGATATTACAGGAGAGGATACAGTTCTAACAAGGTGTTTTTGTT
. : . : . : . : . : . :
rJMSF019A04- TCCTTCGTACATAATAAACACACAATACATACCAAAAGAAAACTATGAGCTTAGTTGAAG
rJMSF012E09- TCCTTCGTACATAATAAACACACAATACATACCAAAAGAAAACTATGAGCTTAGTTGAAG
____________________________________________________________
consensus TCCTTCGTACATAATAAACACACAATACATACCAAAAGAAAACTATGAGCTTAGTTGAAG
. : . : . : . : . : . :
rJMSF019A04- AAACCTTTGTGCCATGGGATGCTTAGCTTGAGAGAGCTGATCAGGCTTCAGAACCTCCAC
rJMSF012E09- AAACCTTTGTGCCATGGGATGCTTAGCTTGAGAGAGCTGATCAGGCTTCAGAACCTCCAC
____________________________________________________________
consensus AAACCTTTGTGCCATGGGATGCTTAGCTTGAGAGAGCTGATCAGGCTTCAGAACCTCCAC
. : . : . : . : . : . :
rJMSF019A04- AATCTCACCCTCAACAAGAAGGCAGACCACATCAGCTATTCTCTGTATTTGCTTGATGCT
rJMSF012E09- AATCTCACCCTCAACAAGAAGGCAGACCACATCAGCTATTCTCTGTATTTGCTTGATGCT
____________________________________________________________
consensus AATCTCACCCTCAACAAGAAGGCAGACCACATCAGCTATTCTCTGTATTTGCTTGATGCT
. : . : . : . : . : . :
rJMSF019A04- GTGAGACACCATTGCAATGGTCATTCTCTTCTCCTTCTTCAACCGGACGAGAACATCCTC
rJMSF012E09- GTGAGACACCATTGCAATGGTCATTCTCTTCTCCTTCTTCAACCGGACGAGAACATCCTC
____________________________________________________________
consensus GTGAGACACCATTGCAATGGTCATTCTCTTCTCCTTCTTCAACCGGACGAGAACATCCTC
. : . : . : . : . : . :
rJMSF019A04- AATATTCTGTGTCGATATTGGATCGAGTGCACTGGTTGGCTCATCTAACAGGAGAACCTC
rJMSF012E09- AATATTCTGTGTCGATATTGGATCGAGTGCACTGGTTGGCTCATCTAACAGGAGAACCTC
____________________________________________________________
consensus AATATTCTGTGTCGATATTGGATCGAGTGCACTGGTTGGCTCATCTAACAGGAGAACCTC
. : . : . : . : . : . :
rJMSF019A04- TGGCTCATTAGCTAAGGTCCTAGCAAGTGCAACCCTCTGAGCTTGGCCAACAGACAGTTC
rJMSF012E09- TGGCTCATTAGCTAAGGTCCTAGCAAGTGCAACCCTCTGAGCTTGGCCAACAGACAGTTC
____________________________________________________________
consensus TGGCTCATTAGCTAAGGTCCTAGCAAGTGCAACCCTCTGAGCTTGGCCAACAGACAGTTC
. : . : . : . : . : . :
rJMSF019A04- ACCACCAGGCTTGTTGCAGAAAGAGGAGTCAAGGTCTGCAAGACTAAGCAATCTCAGGAC
rJMSF012E09- ACCACCAGGCTTGTTGCAGAAAGAGGAGTCAAGGTCTGCAAGACTAAGCAATCTCAGGAC
JMSF031E01+ CAGAAAGAGGAGTCAAGGTCTGCAAGANTAAGCAATCTCAGGAC
____________________________________________________________
consensus ACCACCAGGCTTGTTGCAGAAAGAGGAGTCAAGGTCTGCAAGACTAAGCAATCTCAGGAC
. : . : . : . : . : . :
rJMSF019A04- TTGATCATCACTTAGCTTCTTCCCCCTTAAAAGTGGCCCATATCTGATATTGTCTGCAAC
rJMSF012E09- TTGATCATCACTTAGCTTCTTCCCCCTTAAAAGTGGCCCATATCTGATATTGTCTGCAAC
JMSF031E01+ TTGATCATCACTTAGCTTCTTCCCCCTTAAAAGTGGCCCATATCTGATATTGTCTGCAAC
____________________________________________________________
consensus TTGATCATCACTTAGCTTCTTCCCCCTTAAAAGTGGCCCATATCTGATATTGTCTGCAAC
. : . : . : . : . : . :
rJMSF019A04- TGTGCCTTCAAAGAGAGCAGGGAGCTGAAAGAGCATGCCGACTTTGCAGCGAAGGCTGAG
rJMSF012E09- TGTGCCTTCAAAGAGAGCAGGGAGCTGAAAGAGCATGCCGACTTTGCAGCGAAGGCTGAG
JMSF031E01+ TGTGCCTTCAAAGAGAGCAGGGAGCTGAAAGAGCATGCCGACTTTGCAGCGAAGGCTGAG
____________________________________________________________
consensus TGTGCCTTCAAAGAGAGCAGGGAGCTGAAAGAGCATGCCGACTTTGCAGCGAAGGCTGAG
. : . : . : . : . : . :
rJMSF019A04- GACATCAAGATCACATATGTCTTTGCCATCCAAGAAGACTGTGGCATTTGCAGGCTCCCA
rJMSF012E09- GACATCAAGATCACATATGTCTTTGCCATCCAAGAAGACTGTGGCATTTGCAGGCTCCCA
JMSF031E01+ GACATCAAGATCACATATGTCTTTGCCATCCAAGAAGACTGTGGCATTTGCAGGCTCCCA
____________________________________________________________
consensus GACATCAAGATCACATATGTCTTTGCCATCCAAGAAGACTGTGGCATTTGCAGGCTCCCA
. : . : . : . : . : . :
rJMSF019A04- TAGGCGGTTGAGTGCTCTGAGGAACGTTGACTTTCCACTGCCACTAGGGCCAATGATCCC
rJMSF012E09- TAGGCGGTTGAGTGCTCTGAGGAACGTTGACTTTCCACTGCCACTAGGGCCAATGATTCC
JMSF019A04+ GGAACGTTGACTTTCCACTGCCACTAGGGCCAATGATCCC
JMSF031E01+ TAGGCGGTTGAGTGCTCTGAGGAACGTTGACTTTCCACTGCCACTAGGGCCAATGATCCC
____________________________________________________________
consensus TAGGCGGTTGAGTGCTCTGAGGAACGTTGACTTTCCACTGCCACTAGGGCCAATGATCCC
. : . : . : . : . : . :
rJMSF019A04- CATGATCAGACCTCTGGGTATATCTAAGGTGATCTGGTTGAGA
rJMSF012E09- CATGATCAGACCTCTGGGTATATCTAAGGTGATCTGGTTGAGAAGAGTAANANCCTTGTC
JMSF019A04+ CATGATCAGACCTCTGGGTATATCTAAGGTGATCTGGTTGAGAAGAGTAAGACCCTTGTC
JMSF012E09+ TCTGGGTATATNTAAGGTGATCTGGTTGAGAAGAGTAAGACCCTTGTC
JMSF031E01+ CATGATCAGACCTCTGGGTATATCTAAGGTGATCTGGTTGAGAAGAGTAAGACCCTTGTC
____________________________________________________________
consensus CATGATCAGACCTCTGGGTATATCTAAGGTGATCTGGTTGAGAAGAGTAAGACCCTTGTC
. : . : . : . : . : . :
rJMSF012E09- TGA
JMSF019A04+ TGAAACCCTTGTAAGCCCCTTCACCTGAATCTTGGTTCCAGCTGCCTCATCATCCCCATC
JMSF012E09+ TGAAACCCTTGTAAGCCCCTTCACCTGAATCTTGGTTCCAGCTGCCTCATCATCCCCATC
JMSF031E01+ TGAAACCCTTGTAAGCCCCTTCACCTGAATCTTGGTTCCAGCTGCCTCATCATCCCCATC
____________________________________________________________
consensus TGAAACCCTTGTAAGCCCCTTCACCTGAATCTTGGTTCCAGCTGCCTCATCATCCCCATC
. : . : . : . : . : . :
JMSF019A04+ CACCATAAGCAGAAGCTCTCTTTCT
JMSF012E09+ CACCATAAGCAGAAGCTCTCTTTCT
JMSF031E01+ CACCATAAGCAGAAGCTCTCTTTCTGGATTACAATACCACAAACAGAACACTAAAAAATC
____________________________________________________________
consensus CACCATAAGCAGAAGCTCTCTTTCTGGATTACAATACCACAAACAGAACACTAAAAAATC
. : . : . : . : . : . :
JMSF031E01+ AGTCTTGAAATTCAAGATAAAAGAATTGGTAATAATTTAAAAGATGGGTTTGCTCTAACC
____________________________________________________________
consensus AGTCTTGAAATTCAAGATAAAAGAATTGGTAATAATTTAAAAGATGGGTTTGCTCTAACC
. : . : . : . : . : . :
JMSF031E01+ TTCAGGAACCTCCATTAAACAACTGTCTCAGATCAGATGGTGGAATTGAAGATTGAGCTT
____________________________________________________________
consensus TTCAGGAACCTCCATTAAACAACTGTCTCAGATCAGATGGTGGAATTGAAGATTGAGCTT
. : . : . : . : . : . :
JMSF031E01+ TTCCCCAAAAAAATGAATTGGTAATATAATATATGGGCAGTGGGCTTCACCCCAACCCCC
____________________________________________________________
consensus TTCCCCAAAAAAATGAATTGGTAATATAATATATGGGCAGTGGGCTTCACCCCAACCCCC