Contig 002312:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031C15Sequence682002312 (2)ref|XP_009765899.1|1e-93PREDICTED: protein ELC-like [Nicotiana sylvestris]778008567 (2)ref|XP_009603946.1|1e-72PREDICTED: protein ELC-like [Nicotiana tomentosiformis]
JMSF031F15Sequence653002312 (2)ref|XP_009765899.1|2e-93PREDICTED: protein ELC-like [Nicotiana sylvestris]760008567 (2)ref|XP_009765899.1|2e-102PREDICTED: protein ELC-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF031F15+                                              TTNTAGAAGGACTNGGGNTGGGGCT
                      ____________________________________________________________
consensus                                                TTNTAGAAGGACTNGGGNTGGGGCT
 
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JMSF031F15+           AGGCTAGGGCTAGGGTTAGGGTTTGGATTGGGTCTGCGCTGGGAATACAGAGGGGGATCG
JMSF031C15+            GGCTAGGGCTAGGGTTAGGGTTTGGANTGGGTCTGCGCTGGGAATACAGAGGGGGATCG
                      ____________________________________________________________
consensus             AGGCTAGGGCTAGGGTTAGGGTTTGGATTGGGTCTGCGCTGGGAATACAGAGGGGGATCG
 
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JMSF031F15+           CGGCTAAAATAATGGCATAAATTGCGACNTAATTCAACAAGATTAGAACTAGGGTACAGC
JMSF031C15+           CGGCTAAAATAATGGCATAAATTGCGACCTAATTCAACAAGATTAGAACTAGGGTACAGC
                      ____________________________________________________________
consensus             CGGCTAAAATAATGGCATAAATTGCGACCTAATTCAACAAGATTAGAACTAGGGTACAGC
 
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JMSF031F15+           CAATTCTGAAGATACGGGATGGCAACGACGCCGGAAGGGTTGACGAAAGGATGAGCCCGC
JMSF031C15+           CAATTCTGAAGATACGGGATGGCAACGACGCCGGAAGGGTTGACGAAAGGATGAGCCCGC
                      ____________________________________________________________
consensus             CAATTCTGAAGATACGGGATGGCAACGACGCCGGAAGGGTTGACGAAAGGATGAGCCCGC
 
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JMSF031F15+           TTGATGATCATGTCGCGAGTAGGATTCACGAAGACCAGAGGCGGGTGTTGAGGGTAGGAC
JMSF031C15+           TTGATGATCATGTCGCGAGTAGGATTCACGAAGACCAGAGGCGGGTGTTGAGGGTAGGAC
                      ____________________________________________________________
consensus             TTGATGATCATGTCGCGAGTAGGATTCACGAAGACCAGAGGCGGGTGTTGAGGGTAGGAC
 
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JMSF031F15+           TCCATGAGCCAGATGATAATGGGGATATTATACGTCACACCCTGGAACAGCATAGGGACG
JMSF031C15+           TCCATGAGCCAGATGATAATGGGGATATTATACGTCACACCCTGGAACAGCATAGGGACG
                      ____________________________________________________________
consensus             TCCATGAGCCAGATGATAATGGGGATATTATACGTCACACCCTGGAACAGCATAGGGACG
 
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JMSF031F15+           GTACCGTCGACCTGGAGGAGATTGACAGTACGGCCATCGTTGTGGGTGAAGGTGCCGGTC
JMSF031C15+           GTACCGTCGACCTGGAGGAGATTGACAGTACGGCCATCGTTGTGGGTGAAGGTGCCGGTC
                      ____________________________________________________________
consensus             GTACCGTCGACCTGGAGGAGATTGACAGTACGGCCATCGTTGTGGGTGAAGGTGCCGGTC
 
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JMSF031F15+           TTGGGCTGGAGAGAAGGGTAGGCTTCGATGAGGGCGAGGATGTGTTGGCGGATCATCCAC
JMSF031C15+           TTGGGCTGGAGAGAAGGGTAGGCTTCGATGAGGGCGAGGATGTGTTGGCGGATCATCCAC
                      ____________________________________________________________
consensus             TTGGGCTGGAGAGAAGGGTAGGCTTCGATGAGGGCGAGGATGTGTTGGCGGATCATCCAC
 
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JMSF031F15+           TTGAGCTCCTCGGAGTAGGGAAGAGCCGCCGGGCCTCGCTGGGAGAGAACGCTGCTCAGG
JMSF031C15+           TTGAGCTCCTCGGAGTAGGGAAGAGCCGCCGGGCCTCGCTGGGAGAGAACGCTGCTCAGG
                      ____________________________________________________________
consensus             TTGAGCTCCTCGGAGTAGGGAAGAGCCGCCGGGCCTCGCTGGGAGAGAACGCTGCTCAGG
 
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JMSF031F15+           AATTGCTGGGTGTATTGGATACTGGGCGGGTGGGTCGGCGGTGGAACCATCGTGATCGAT
JMSF031C15+           AATTGCTGGGTGTATTGGATACTGGGCGGGTGGGTCGGCGGTGGAACCATCGTGATCGAT
                      ____________________________________________________________
consensus             AATTGCTGGGTGTATTGGATACTGGGCGGGTGGGTCGGCGGTGGAACCATCGTGATCGAT
 
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JMSF031F15+           CGGAGAAGAGGAGAAGCGCGATGGATCTTGGTGATGATGTGCTCGATCAAAGTTCCCTGA
JMSF031C15+           CGGAGAAGAGGAGAAGCGCGATGGATCTTGGTGATGATGTGCTCGATCAAAGTTCCCTGA
                      ____________________________________________________________
consensus             CGGAGAAGAGGAGAAGCGCGATGGATCTTGGTGATGATGTGCTCGATCAAAGTTCCCTGA
 
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JMSF031F15+           GAGAGGGGAAAGAATCGGAGGTCGCTT                                 
JMSF031C15+           GAGAGGGGAAAGAATCGGAGGTCGCTTAGCGAGATAGATTTCCGCGTAACTGCGTCTCCC
                      ____________________________________________________________
consensus             GAGAGGGGAAAGAATCGGAGGTCGCTTAGCGAGATAGATTTCCGCGTAACTGCGTCTCCC