Contig 002311:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS124D05Sequence570002311 (4)gb|EYU45776.1|3e-82hypothetical protein MIMGU_mgv1a001899mg [Erythranthe guttata]
JMSF012D07Sequence451002311 (4)ref|XP_006405868.1|3e-50hypothetical protein EUTSA_v100276400mg, partial [Eutrema salsugineum] gb|ESQ473164001408 (2)
JMSF031A08Sequence662002311 (4)ref|XP_006372512.1|7e-100hypothetical protein POPTR_0017s023401g, partial [Populus trichocarpa] gb|ERP503177001408 (2)
JMSF050F22Sequence666002311 (4)ref|XP_006372512.1|1e-102hypothetical protein POPTR_0017s023401g, partial [Populus trichocarpa] gb|ERP503

Alignment

This contig is upended


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JMSF050F22+                                                                 ATTTCA
JMSF031A08+                                                                     CA
                      ____________________________________________________________
consensus                                                                   ATTTCA
 
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JMSF050F22+           GTAAAACGGCTCCGATCAGATCCAAAAGCCATAGACTGATCCTGGAGATCACATTCACCA
JMSF031A08+           GTAAAACGGCTCCGATCAGATCCAAAAGCCATAGACTGATCCTGGAGATCACATTCACCA
                      ____________________________________________________________
consensus             GTAAAACGGCTCCGATCAGATCCAAAAGCCATAGACTGATCCTGGAGATCACATTCACCA
 
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JMFS124D05+                     AAATTGGGCAATCTAATGGATGATTGATCAGCAAAAACTCCATTACTCCT
JMSF050F22+           CCTTGATCACAAATTGGGCAATCTAATGGATGATTGATCAGCAAAAACTCCATTACTCCT
JMSF031A08+           CCTTGATCACAAATTGGGCAATNTAATGGATGATTGATCAGCAAAAACTCCATTACTCCT
                      ____________________________________________________________
consensus             CCTTGATCACAAATTGGGCAATCTAATGGATGATTGATCAGCAAAAACTCCATTACTCCT
 
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JMFS124D05+           TCACGGGCCTTCTTGGCAACAGGTGTATTTGTTTTGATTTTCATTCCTGGGAGTGCGGGC
JMSF050F22+           TCACGGGCCTTCTTGGCAACAGGTGTATTTGTTTTGATTTTCATTCCTGGGAGTGCGGGC
JMSF031A08+           TCACGGGCCTTCTTGGCAACAGGTGTATTTGTTTTGATTTTCATTCCTGGGAGTGCGGGC
                      ____________________________________________________________
consensus             TCACGGGCCTTCTTGGCAACAGGTGTATTTGTTTTGATTTTCATTCCTGGGAGTGCGGGC
 
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JMFS124D05+           ATAGCGCAAGAGGCAACGGGTTTGGGGGACTTCTCGACCTCGACGAGGCACATACGGCAG
JMSF050F22+           ATAGCGCAAGAGGCAACGGGTTTGGGGGACTTCTCGACCTCGACGAGGCACATACGGCAG
JMSF012D07+                                        CTTCTCGACCTCGACGAGGCACATACGGCAG
JMSF031A08+           ATAGCGCAAGAGGCAACGGGTTTGGGGGACTTCTCGACCTCGACGAGGCACATACGGCAG
                      ____________________________________________________________
consensus             ATAGCGCAAGAGGCAACGGGTTTGGGGGACTTCTCGACCTCGACGAGGCACATACGGCAG
 
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JMFS124D05+           TTTCCGGCGATGGAGAGGCGGCTGTGGTAGCAGAACCTGGGAATGTCAACGCCGGCGATC
JMSF050F22+           TTTCCGGCGATGGAGAGGCGGCTGTGGTAGCAGAACCTGGGAATGTCAACGCCGGCGATC
JMSF012D07+           TTTCCGGCGATGGAGAGGCGGCTGTGGTAGCAGAACCTGGGAATGTCAACGCCGGCGATC
JMSF031A08+           TTTCCGGCGANGGAGAGGCGGCTGTGGTAGCAGAACCTGGGAATGTCAACGCCGGCGATC
                      ____________________________________________________________
consensus             TTTCCGGCGATGGAGAGGCGGCTGTGGTAGCAGAACCTGGGAATGTCAACGCCGGCGATC
 
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JMFS124D05+           TCGCAGGCCTGGAGAACCGTCATCCCCTTGGGGATTTTGACCGGGTAATCATCAACGAAC
JMSF050F22+           TCGCAGGCCTGGAGAACCGTCATCCCCTTGGGGATTTTGACCGGGTAATCATCAACGAAC
JMSF012D07+           TCGCAGGCCTGGAGAACCGTCATCCCCTTGGGGATTTTGACCGGGTAATCATCAACGAAC
JMSF031A08+           TCGCAGGCCTGGAGAACCGTCATCCCCTTGGGGATTTTGACCGGGTAATCATCAACGAAC
                      ____________________________________________________________
consensus             TCGCAGGCCTGGAGAACCGTCATCCCCTTGGGGATTTTGACCGGGTAATCATCAACGAAC
 
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JMFS124D05+           ACCTCGATGGCGTCATCCGGGTTGGGGAAGTGGACGCGGGCGCCTCCGACGGGAGTCCGC
JMSF050F22+           ACCTCGATGGCGTCATCCGGGTTGGGGAAGTGGACGCGGGCGCCTCCGACGGGAGTCCGC
JMSF012D07+           ACCTCGATGGCGTCATCCGGGTTGGGGAAGTGGACGCGGGCGCCTCCGACGGGAGTCCGC
JMSF031A08+           ACCTCGATGGCGTCATCCGGGTTGGGGAAGTGGACGCGGGCGCCTCCGACGGGAGTCCGC
                      ____________________________________________________________
consensus             ACCTCGATGGCGTCATCCGGGTTGGGGAAGTGGACGCGGGCGCCTCCGACGGGAGTCCGC
 
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JMFS124D05+           TTGGGTAGATCCGGCGCCGCAGGCTCTTGAGCAGCTGCAGCCTCGGCGTTGCGGAGGTCC
JMSF050F22+           TTGGGTAGATCCGGCGCCGCAGGCTCTTGAGCAGCTGCAGCCTCGGCGTTGCGGAGGTCC
JMSF012D07+           TTGGGTAGATCCGGCGCCGCAGGCTCTTGAGCAGCTGCAGCCTCGGCGTTGCGGAGGTCC
JMSF031A08+           TTGGGTAGATCCGGCGCCGCAGGCTCTTGAGCAGCTGCAGCCTCGGCGTTGCGGAGGTCC
                      ____________________________________________________________
consensus             TTGGGTAGATCCGGCGCCGCAGGCTCTTGAGCAGCTGCAGCCTCGGCGTTGCGGAGGTCC
 
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JMFS124D05+           GGCGTGGAGCCGATTGACCGGAGGAAAACGTTGCGGCCCGCTGAGGAGAAAACCCTAGAA
JMSF050F22+           GGCGTGGAGCCGATTGACCGGAGGAAAACGTTGCGGCCCGCTGAGGAGAAAACCCTAGAA
JMSF012D07+           GGCGTGGAGCCGATTGACCGGAGGAAAACGTTGCGGCCCGCTGAGGAGAAAACCCTAGAA
JMSF031A08+           GGCGTGGAGCCGATTGACCGGAGGAAAACGTTGCGGCCCGCTGAGGAGAAAACCCTAGAA
                      ____________________________________________________________
consensus             GGCGTGGAGCCGATTGACCGGAGGAAAACGTTGCGGCCCGCTGAGGAGAAAACCCTAGAA
 
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JMFS124D05+           GATCTAAGGGTTCGAGAAGCGAGTAACCCCAATCCCATTCTTCTTTGTTGTGTTGTCTCT
JMSF050F22+           GATCTAAGGGTTCGAGAAGCGAGTAACCCCAATCCCATTCTTCTTTGTTGTGTTGTCTCT
JMSF012D07+           GATCTAAGGGTTCGAGAAGCGAGTAACCCCAATCCCATTCTTCTTTGTTGTGTTGTCTCT
JMSF031A08+           GATCTAAGGGTTCGAGAAGCGAGTAACCCCAATCCCATTCTTCTTTGTTGTGTTGTCTCT
                      ____________________________________________________________
consensus             GATCTAAGGGTTCGAGAAGCGAGTAACCCCAATCCCATTCTTCTTTGTTGTGTTGTCTCT
 
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JMFS124D05+           CTTCTCTCTTGGCTTCGTTACAGTGTCGAGAGAGATGGCT                    
JMSF050F22+           CTTCTCTCTTGGCTTCGTTACAGTGTCGAGAGAGATGGCTGTGAAATGAGGAGCGT    
JMSF012D07+           CTTCTCTCTTGGCTTCGTTACAGTGTCGAGAGAGATGGCTGTGAAATGAGGAGCGT    
JMSF031A08+           CTTCTCTCTTGGCTTCGTTACAGTGTCGAGAGAGATGGCTGTGAAATGAGGAGCGTGTCC
                      ____________________________________________________________
consensus             CTTCTCTCTTGGCTTCGTTACAGTGTCGAGAGAGATGGCTGTGAAATGAGGAGCGTGTCC