Contig 002305:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051O03-                            TACCTACTGCATAAGTANCTAACAGTTTATATNTGTTTTGCA
                      ____________________________________________________________
consensus                               TACCTACTGCATAAGTANCTAACAGTTTATATNTGTTTTGCA
 
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rJMSF051O03-          ANTCATCTATCCAGCTTCAACAACGCAGCATCCATACATANATATNCANAGTACATATAT
                      ____________________________________________________________
consensus             ANTCATCTATCCAGCTTCAACAACGCAGCATCCATACATANATATNCANAGTACATATAT
 
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rJMSF051O03-          AAGTATACACAGTANGTGTNGNTTTTAATTAAGAAAGTGGGATTGGATATTTGNGGATGC
rJMSF029P18-             TATACACAGTATGTGTAGTTTTTAATTAAGAAAGTGGGATTGGATATTTGTGGATGC
rJMSF032E11-             TATACACAGTATGTGTAGTTTTTAATTAAGAAAGTGGGATTGGATATTTGTGGATGC
                      ____________________________________________________________
consensus             AAGTATACACAGTATGTGTAGTTTTTAATTAAGAAAGTGGGATTGGATATTTGTGGATGC
 
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rJMSF051O03-          AATNGGCCCANGGACCCTTTTGGGCCTCGCCTAAAATGGGCCGAATGCATTGGAGGACCA
rJMSF029P18-          AATCGGCCCATGGACCCTTTTGGGCCTCGCCTAAAATGGGCCGAATGCATTGGAGGACCA
rJMSF032E11-          AATCGGCCCATGGACCCTTTTGGGCCTCGCCTAAAATGGGCCGAATGCATTGGAGGACCA
                      ____________________________________________________________
consensus             AATCGGCCCATGGACCCTTTTGGGCCTCGCCTAAAATGGGCCGAATGCATTGGAGGACCA
 
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rJMSF051O03-          AACTGATGCATTTGGGCCCAGTTCCCATACCCNACTGCCAAACTTTATNACCTTTCTTCA
rJMSF029P18-          AACTGTTGCATTTGGGCCCAGTTCCCATACCCAACTGCCAAACTTTATCACCTTTCTTCA
rJMSF032E11-          AACTGTTGCATTTGGGCCCAGTTCCCATACCCAACTGCCAAACTTTATCACCTTTCTTCA
                      ____________________________________________________________
consensus             AACTGTTGCATTTGGGCCCAGTTCCCATACCCAACTGCCAAACTTTATCACCTTTCTTCA
 
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rJMSF051O03-          CTCTTTCTTTAGCTTCCAAGNAANCCAACTCATACCNCAGAGATGCAGAAGATTGGTTTC
rJMSF029P18-          CTCTTTCTTTAGCTTCCAAGTAAGCCAACTCATACCACAAAGATGCAGAAGATTGGTTTC
rJMSF032E11-          CTCTTTCTTTAGCTTCCAAGTAAGCCAACTCATACCACAAAGATGCAGAAGATTGGTTTC
                      ____________________________________________________________
consensus             CTCTTTCTTTAGCTTCCAAGTAAGCCAACTCATACCACAAAGATGCAGAAGATTGGTTTC
 
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rJMSF051O03-          CGAACCNATACAACGTCNTCAAAGNCGCCTCCATATCTATATCTCCCAACTTCAACCTCT
rJMSF029P18-          CGAACCTATACAACGTCATCAAAGCCGCCTCCATATCTATATCTCCCAACTTCAACCTCT
rJMSF032E11-          CGAACCTATACAACGTCATCAAAGCCGCCTCCATATCTATATCTCCCAACTTCAACCTCT
JMFS166D07+                                                       CCCAACTTCAACCTCT
                      ____________________________________________________________
consensus             CGAACCTATACAACGTCATCAAAGCCGCCTCCATATCTATATCTCCCAACTTCAACCTCT
 
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rJMSF051O03-          TTGCAGTTTCCCGAACCACCGACTTCCCGGTCGCCGGAAAACAGAAATGTTGTATCGCCG
rJMSF029P18-          TTGCAGTTTCCCGAACCACCGACTTCCCGGTCGCCGGAAAACAGAAATGTTGTATCGCCG
rJMSF032E11-          TTGCAGTTTCCCGAACCACCGACTTCCCGGTCGCCGGAAAACAGAAATGTTGTATCGCCG
JMFS166D07+           NTGCAGTTTCCCGAACCACCGACTTCCCGGTCGCCGGAAAACAGAAATGTTGTATCGCCG
                      ____________________________________________________________
consensus             TTGCAGTTTCCCGAACCACCGACTTCCCGGTCGCCGGAAAACAGAAATGTTGTATCGCCG
 
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rJMSF051O03-          ACTTGAAATTCGNGACATATNTCTCTGTGGACTTGTCTATAAACNTCCTCTTAAAGGCGG
rJMSF029P18-          ACTTGAAATTCGGGACATATATCTCTGTGGACTTGTCTATAAACTTCCTCTTAAAGGCGG
rJMSF032E11-          ACTTGAAATTCGGGACATATATCTCTGTGGACTTGTCTATAAACTTCCTCTTAAAGGCGG
JMFS166D07+           ACTTGAAATTCGGGACATATATCTCTGTGGACTTGTCTATAAACTTCCTCTTAAAGGCGG
                      ____________________________________________________________
consensus             ACTTGAAATTCGGGACATATATCTCTGTGGACTTGTCTATAAACTTCCTCTTAAAGGCGG
 
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rJMSF051O03-          AAGCCAGAAGCCGGAGTATTTCAGTGATGGGAAGAAATTTGGCCCCCA            
rJMSF029P18-          AAGCCAGAAACCGGAGTATTTCAGTGATGGGAAGAAATTTGGCCCCCAGAATGGGGATAT
rJMSF032E11-          AAGCCAGAAACCGGAGTATTTCAGTGATGGGAAGAAATTTGGCCCCCAGAATGGGGATAT
JMFS166D07+           AAGCCAGAAACCGGAGTATTTCAGTGATGGGAAGAAATTTGGCCCCCAGAATGGGGATAT
JMSF032E11+              CCAGAAACCGGAGTATTTCAGTGATGGGAAGAAATTTGGCCCCCAGAATGGGGATAT
                      ____________________________________________________________
consensus             AAGCCAGAAACCGGAGTATTTCAGTGATGGGAAGAAATTTGGCCCCCAGAATGGGGATAT
 
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rJMSF029P18-          GAGTTTGCAGAGTTTCGCCGGCGACGAACAAGACGTCGCCGTTGAGCCTCATACCGGTGA
rJMSF032E11-          GAGTTTGCAGAGTTTCGCCGGCGACGAACAAGACGTCGCCGTTGAGCCTCATACCGGTGA
JMFS166D07+           GAGTTTGCAGAGTTTCGCCGGCGACGAACAAGACGTCGCCGTTGAGCCTCATACCGGTGA
JMSF032E11+           GAGTTTGCAGAGTTTCGCCGGCGACGAACAAGACGTCGCCGTTGAGCCTCATACCGGTGA
                      ____________________________________________________________
consensus             GAGTTTGCAGAGTTTCGCCGGCGACGAACAAGACGTCGCCGTTGAGCCTCATACCGGTGA
 
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rJMSF029P18-          GACCTTCGGAGTCCTCATCGCGGATGGCCGCGTTGTAACGCCTGTCGTCGAACGCCCCTT
rJMSF032E11-          GACCTTCGGAGTCCTCATCGCGGATGGCCGCGTTGTAACGCCTGTCGTCGAACGCCCCTT
JMFS166D07+           GACCTTCGGAGTCCTCATCGCGGATGGCCGCGTTGTAACGCCTGTCGTCGAACGCCCCTT
JMSF032E11+           GACCTTCGGAGTCCTCATCGCGGATGGCCGCGTTGTAACGCCTGTCGTCGAACGCCCCTT
                      ____________________________________________________________
consensus             GACCTTCGGAGTCCTCATCGCGGATGGCCGCGTTGTAACGCCTGTCGTCGAACGCCCCTT
 
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rJMSF029P18-          GCGTCCTTAGACTCCATAGCAGCTTGTATTTCGCCCCACTCTTGGCTTCCCTTTTGTTGC
rJMSF032E11-          GTGTCCTTAGACTCCATAGCAGCTTGTATTTCGCCCCACTCTTGGCTTCCCTTTNGTTGC
JMFS166D07+           GCGTCCTTAGACTCCATAGCAGCTTGTATTTCGCCCCACTCTTGGCTTCCCTTTTGTTGC
JMSF032E11+           GTGTCCTTAGACTCCATAGCAGCTTGTATTTCGCCCCACTCTTGGCTTCCCTTTTGTTGC
                      ____________________________________________________________
consensus             GTGTCCTTAGACTCCATAGCAGCTTGTATTTCGCCCCACTCTTGGCTTCCCTTTTGTTGC
 
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rJMSF029P18-          TCAGTAACACGGCGGCGC                                          
rJMSF032E11-          TCAGTAACACGGCGGCGCCGCCCATCCGGAAAATACAGTTCAGCACCAGGAA        
JMFS166D07+           TCAGTAACACGGCGGCGCCGCCCATCCGGAAAATACAGTTCAGCACCAGGAATGCCTTCT
JMSF032E11+           TCAGTAACACGGCGGCGCCGCCCATCCGGAAAATACAGTTCAGCACCAGGAATGCCTTCT
                      ____________________________________________________________
consensus             TCAGTAACACGGCGGCGCCGCCCATCCGGAAAATACAGTTCAGCACCAGGAATGCCTTCT
 
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JMFS166D07+           CCTTTCCAGGATACCAACCGGTTGACAAGATTTCAGTGCTGAGAATAACAGCGTTACATC
JMSF032E11+           CCTTTCCAGGATACCAACCGGTTGACAAGATTTCAGTGCTGAGAATAACAGCGTTACATC
                      ____________________________________________________________
consensus             CCTTTCCAGGATACCAACCGGTTGACAAGATTTCAGTGCTGAGAATAACAGCGTTACATC
 
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JMFS166D07+           TGCGGTGAGTTTTCATGATGTTGCGGACCATATCGACGGCGAGTGTGTTAGCACTGCAAC
JMSF032E11+           TGCGGTGAGTTTTCATGATGTTGCGGACCATATCGACGGCGAGTGTGTTAGCACTGCAAC
                      ____________________________________________________________
consensus             TGCGGTGAGTTTTCATGATGTTGCGGACCATATCGACGGCGAGTGTGTTAGCACTGCAAC
 
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JMFS166D07+           CCATTCCGGTGA                                                
JMSF032E11+           CCATTCCGGTGAGGTTAAAGGTCTTGACGTCAGCTCTCATAGCAAATTTGTTGACGATGA
                      ____________________________________________________________
consensus             CCATTCCGGTGAGGTTAAAGGTCTTGACGTCAGCTCTCATAGCAAATTTGTTGACGATGA
 
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JMSF032E11+           TGGAGGCGAGAGAGGGGTCGGGGCAAAACCCACTGCAGTTAACCACCAGGATATCGATAT
                      ____________________________________________________________
consensus             TGGAGGCGAGAGAGGGGTCGGGGCAAAACCCACTGCAGTTAACCACCAGGATATCGATAT
 
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JMSF032E11+           CCTTAGGAGAAAGCTTGTTGTTTGAGAGCAGTTGTTGGAAAATGGGGAAGAGGACCATGT
                      ____________________________________________________________
consensus             CCTTAGGAGAAAGCTTGTTGTTTGAGAGCAGTTGTTGGAAAATGGGGAAGAGGACCATGT
 
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JMSF032E11+           GGACTTCATTAATGGCATCTTGGGGGCCTGATCTTGCGGGGATGAAGTGCAGAGCTGGAG
JMSF029P18+                                        GATCTTGCGGGGATGAAGTGCAGAGCTGGAG
                      ____________________________________________________________
consensus             GGACTTCATTAATGGCATCTTGGGGGCCTGATCTTGCGGGGATGAAGTGCAGAGCTGGAG
 
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JMSF032E11+           GCAAGTAAGTCTGCTCACTTAAACCAGAGAGATTCAAGATTTTTTCCATGAAAGCTACGC
JMSF051O03+                                  CCAGAGAGATTCAAGATTTTTTCCATGAAAGCTACGC
JMSF029P18+           GCAAGTAAGTCTGCTCACTTAAACCAGAGAGATTCAAGATTTTTTCCATGAAAGCTACGC
                      ____________________________________________________________
consensus             GCAAGTAAGTCTGCTCACTTAAACCAGAGAGATTCAAGATTTTTTCCATGAAAGCTACGC
 
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JMSF032E11+           C                                                           
JMSF051O03+           CCNNGCTGTCAAAGAAGCCCCCCATCATTGGGATATGCTCCAGGAAGGAGGAGAAGGGGA
JMSF029P18+           CCTTGCTGTCAAAGAAGCCCCCCATCATTTGGATATGCTCCAGGAAGGAGGAGAAGGGGA
                      ____________________________________________________________
consensus             CCTTGCTGTCAAAGAAGCCCCCCATCATTTGGATATGCTCCAGGAAGGAGGAGAAGGGGA
 
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JMSF051O03+           TTCTGCAAAAGTTTGGNGGCTTGAAACAAACGTAGTCCACCACGTACACCGGAGAAGAAG
JMSF029P18+           TTCTGCAAAAGTTTGGAGGCTTGAAACAAACGTAGTCCACCACGTACACCGGAGAAGAAG
                      ____________________________________________________________
consensus             TTCTGCAAAAGTTTGGAGGCTTGAAACAAACGTAGTCCACCACGTACACCGGAGAAGAAG
 
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JMSF051O03+           CACAGAGACAGTANGACAACGAAACGACGNCCAAAAGGACAGATGAAAAGGTAAGAAGGN
JMSF029P18+           CACAGAGACAGTAAGACAACGAAACGACGACCAAAAGGACAGATGAAAAGGTAAGAAGGT
                      ____________________________________________________________
consensus             CACAGAGACAGTAAGACAACGAAACGACGACCAAAAGGACAGATGAAAAGGTAAGAAGGT
 
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JMSF051O03+           GGTAGAAAGGATTAAGCTGNTGTTTTAAGATGATTAAATAAGATTCTATGAAGAAAAAGA
JMSF029P18+           GGTAGAAAGGATTAAGCTGGTGTTTTAAGATGATTAAATAAGATTCTATGAAGAAAAAGA
                      ____________________________________________________________
consensus             GGTAGAAAGGATTAAGCTGGTGTTTTAAGATGATTAAATAAGATTCTATGAAGAAAAAGA
 
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JMSF051O03+           GTATGAGAATTGAGAGATTGAGAAGGCGAAGAAGAGTTGAACGGAAATGCTCCCACAGAA
JMSF029P18+           GTATGAGAATTGAGAGATTGAGAAGGCGAAGAAGAGTTGAACGGAAATGCTCCCACAGAA
                      ____________________________________________________________
consensus             GTATGAGAATTGAGAGATTGAGAAGGCGAAGAAGAGTTGAACGGAAATGCTCCCACAGAA
 
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JMSF051O03+           GAAGGTTGTCGGAAACCGCCGCTTCTCTTGGCTTTTCCGGCTGGGAGAGTACTACTGCAG
JMSF029P18+           GAAGGTTGTCGGAAACCGCCGCTTCTCTTGGCTTTTCCGGCTGGGAGAGTACTACTGCAG
                      ____________________________________________________________
consensus             GAAGGTTGTCGGAAACCGCCGCTTCTCTTGGCTTTTCCGGCTGGGAGAGTACTACTGCAG
 
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JMSF051O03+           GCTCCANTGGGGGGATCGGAGGATCGAGGCCGACGGTACGCGCGCTACGGTGATCTATCC
JMSF029P18+           GCTCCATTGGGGGGATCGGAGGATCGAGGCCGACGGTACGCGCGCTACGGTGATCTATCC
                      ____________________________________________________________
consensus             GCTCCATTGGGGGGATCGGAGGATCGAGGCCGACGGTACGCGCGCTACGGTGATCTATCC
 
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JMSF051O03+           ACAATATAATAATAATCTAATAATAATAANGGAGTGTATTAGAGAAGAGAATGGAAGATT
JMSF029P18+           ACAATATAATAATAATCTAATAATAATAATGGAGTGTATTAGAGAAGAGAATGGAAGATT
                      ____________________________________________________________
consensus             ACAATATAATAATAATCTAATAATAATAATGGAGTGTATTAGAGAAGAGAATGGAAGATT
 
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JMSF051O03+           AGATAGATGCTCTGTTTGTTAGTTGCATATATTATATTATGTTTCATGCAACACTACTTC
JMSF029P18+           AGATAGATGCTCTGTTTGTTAGTTGCATATATTATATTATGTTTCATGCAACACTACTTC
                      ____________________________________________________________
consensus             AGATAGATGCTCTGTTTGTTAGTTGCATATATTATATTATGTTTCATGCAACACTACTTC