| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF029J12 | Sequence | 692 | 002300 (3) | ref|XP_009619746.1| | 2e-99 | PREDICTED: WD repeat-containing protein 74 [Nicotiana tomentosiformis] | 760 | 008560 (3) | gb|EYU23109.1| | 9e-23 | hypothetical protein MIMGU_mgv1a007540mg [Erythranthe guttata] |
| JMSF034K05 | Sequence | 679 | 002300 (3) | ref|XP_009619746.1| | 5e-98 | PREDICTED: WD repeat-containing protein 74 [Nicotiana tomentosiformis] | 659 | 008560 (3) | ref|XP_009619746.1| | 6e-09 | PREDICTED: WD repeat-containing protein 74 [Nicotiana tomentosiformis] |
| JMSF046B01 | Sequence | 812 | 002300 (3) | ref|XP_009619746.1| | 7e-127 | PREDICTED: WD repeat-containing protein 74 [Nicotiana tomentosiformis] | 849 | 008560 (3) | ref|XP_006352262.1| | 173 | PREDICTED: WD repeat-containing protein 74-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF046B01+ AAAATCAATTGAAATGACAGGTNTTNTCTGAGC
____________________________________________________________
consensus AAAATCAATTGAAATGACAGGTNTTNTCTGAGC
. : . : . : . : . : . :
JMSF046B01+ AGAAATATCATAAAGACGCACCTGATGGCTGTTAGTGCCAGCTATAATTTTGCGATGATC
____________________________________________________________
consensus AGAAATATCATAAAGACGCACCTGATGGCTGTTAGTGCCAGCTATAATTTTGCGATGATC
. : . : . : . : . : . :
JMSF046B01+ ATCCTTACTTAGGAATGTTGCAGATGTAAAGCACGGTGGGGTAAAGATGCCAAGACTGTT
JMSF034K05+ GTAAAGATGCCAAGACTGTT
JMSF029J12+ AAGCACGGTGGGGTAAAGATGCCAAGACTGTT
____________________________________________________________
consensus ATCCTTACTTAGGAATGTTGCAGATGTAAAGCACGGTGGGGTAAAGATGCCAAGACTGTT
. : . : . : . : . : . :
JMSF046B01+ TTTAGGAGGAGATTTTGCAACCCAGATTTTACCACTTTGTTCCAGATCCCACACATTAAT
JMSF034K05+ TTTAGGAGGAGATTTTGCAACCCAGATTTTACCACTTTGTTCCAGATCCCACACATTAAT
JMSF029J12+ TTTAGGAGGAGATTTTGCAACCCAGATTTTACCACTTTGTTCCAGATCCCACACATTAAT
____________________________________________________________
consensus TTTAGGAGGAGATTTTGCAACCCAGATTTTACCACTTTGTTCCAGATCCCACACATTAAT
. : . : . : . : . : . :
JMSF046B01+ TTCAACTCCCTGCCCTGCAAACAAAGCATAATGCTCACTGCTGTCTACTTTGGAGCACAA
JMSF034K05+ TTCAACTCCCTGCCCTGCAAACAAAGCATAATGCTCACTGCTGTCTACTTTGGAGCACAA
JMSF029J12+ TTCAACTCCCTGCCCTGCAAACAAAGCATAATGCTCACTGCTGTCTACTTTGGAGCACAA
____________________________________________________________
consensus TTCAACTCCCTGCCCTGCAAACAAAGCATAATGCTCACTGCTGTCTACTTTGGAGCACAA
. : . : . : . : . : . :
JMSF046B01+ AATGTTACCCGAACCACATACATTCCATATAGTTTGTGAACTCTCAGTGACAGAATCTCC
JMSF034K05+ AATGTTACCCGAACCACATACATTCCATATAGTTTGTGAACTCTCAGTGACAGAATCTCC
JMSF029J12+ AATGTTACCCGAACCACATACATTCCATATAGTTTGTGAACTCTCAGTGACAGAATCTCC
____________________________________________________________
consensus AATGTTACCCGAACCACATACATTCCATATAGTTTGTGAACTCTCAGTGACAGAATCTCC
. : . : . : . : . : . :
JMSF046B01+ AAGTGACTTAGGGATTTCAACAGACCTTATACTTGCCTGTCCTTTTGTTGTGCAAGCAAG
JMSF034K05+ AAGTGACTTAGGGATTTCAACAGACCTTATACTTGCCTGTCCTTTTGTTGTGCAAGCAAG
JMSF029J12+ AAGTGACTTAGGGATTTCAACAGACCTTATACTTGCCTGTCCTTTTGTTGTGCAAGCAAG
____________________________________________________________
consensus AAGTGACTTAGGGATTTCAACAGACCTTATACTTGCCTGTCCTTTTGTTGTGCAAGCAAG
. : . : . : . : . : . :
JMSF046B01+ CAAGGTACATGACATCAATGACGATTCCAATCTCTGCTTACTGAAAAGATGCAAAGCAAC
JMSF034K05+ CAAGGTACATGACATCAATGACGATTCCAATCTCTGCTTACTGAAAAGATGCAAAGCAAC
JMSF029J12+ CAAGGTACATGACATCAATGACGATTCCAATCTCTGCTTACTGAAAAGATGCAAAGCAAC
____________________________________________________________
consensus CAAGGTACATGACATCAATGACGATTCCAATCTCTGCTTACTGAAAAGATGCAAAGCAAC
. : . : . : . : . : . :
JMSF046B01+ AATTGCATCATCATCACTCACGCTGCCACTTTCACTAGAACTTGGAATAGCAAGGCGAAC
JMSF034K05+ AATTGCATCATCATCACTCACGCTGCCACTTTCACTAGAACTTGGAATAGCAAGGCGAAC
JMSF029J12+ AATTGCATCATCATCACTCACGCTGCCACTTTCACTAGAACTTGGAATAGCAAGGCGAAC
____________________________________________________________
consensus AATTGCATCATCATCACTCACGCTGCCACTTTCACTAGAACTTGGAATAGCAAGGCGAAC
. : . : . : . : . : . :
JMSF046B01+ ATCACCATTGATAGGACTAATCACCTCAATCGTGCCATTTTTTCTTGCAACACCAAGCAA
JMSF034K05+ ATCACCATTGATAGGACTAATCACCTCAATCGTGCCATTTTTTCTTGCAACACCAAGCAA
JMSF029J12+ ATCACCATTGATAGGACTAATCACCTCAATCGTGCCATTTTTTCTTGCAACACCAAGCAA
____________________________________________________________
consensus ATCACCATTGATAGGACTAATCACCTCAATCGTGCCATTTTTTCTTGCAACACCAAGCAA
. : . : . : . : . : . :
JMSF046B01+ AGGGTCATTCTCGCGGTCAATCATGGAAGTAGCTAGCACGCATCTCGAGGAATCCGGGTC
JMSF034K05+ AGGGTCATTCTCGCGGTCAATCATGGAAGTAGCTAGCACGCATCTCGAGGAATCCGGGTC
JMSF029J12+ AGGGTCATTCTCGCGGTCAATCATGGAAGTAGCTAGCACGCATCTCGAGGAATCCGGGTC
____________________________________________________________
consensus AGGGTCATTCTCGCGGTCAATCATGGAAGTAGCTAGCACGCATCTCGAGGAATCCGGGTC
. : . : . : . : . : . :
JMSF046B01+ GCCCCACCGTTCCACCACAGCCGGAGCTTCCTTTTGCTCGCCGCCGCGAGCTTCAATCAC
JMSF034K05+ GCCCCACCGTTCCACCACAGCCGGAGCTTCCTTTTGCTCGCCGCCGCGAGCTTCAATCAC
JMSF029J12+ GCCCCACCGTTCCACCACAGCCGGAGCTTCCTTTTGCTCGCCGCCGCGAGCTTCAATCAC
____________________________________________________________
consensus GCCCCACCGTTCCACCACAGCCGGAGCTTCCTTTTGCTCGCCGCCGCGAGCTTCAATCAC
. : . : . : . : . : . :
JMSF046B01+ TTTGGTGAGTCCAAGTACATCGAAGGTTAAGGCCCGGAGGCGAGGGCAGCCAGGGCTCTC
JMSF034K05+ TTTGGTGAGTCCAAGTACATCGAAGGTTAAGGCCCGGAGGCGAGGGCAGCCAGGGCTCTC
JMSF029J12+ TTTGGTGAGTCCAAGTACATCGAAGGTTAAGGCCCGGAGGCGAGGGCAGCCAGGGCTCTC
____________________________________________________________
consensus TTTGGTGAGTCCAAGTACATCGAAGGTTAAGGCCCGGAGGCGAGGGCAGCCAGGGCTCTC
. : . : . : . : . : . :
JMSF046B01+ GGCGGTAATCGTTCGCGGCATGGTAGCTTCTTCTACTTGGGTGACGGCGACGATGGCT
JMSF034K05+ GGCGGTAATCGTTCGCGGCATGGTAGCTTCTTCTACTTGGGTGACGGCGACGATGGCT
JMSF029J12+ GGCGGTAATCGTTCGCGGCATGGTAGCTTCTTCTACTTGGGTGACGGCGACGATGGCTGC
____________________________________________________________
consensus GGCGGTAATCGTTCGCGGCATGGTAGCTTCTTCTACTTGGGTGACGGCGACGATGGCTGC