Contig 002296:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF047L14+                                                   GTAGCCGGAAGTGGTTACCC
JMSF029D13+                                                 CAGTAGCCGGAAGTGGTTACCC
                      ____________________________________________________________
consensus                                                   CAGTAGCCGGAAGTGGTTACCC
 
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JMSF047L14+           GGTTGGGTCTGTCGCCGTTTCTGTACTTGCGATCTCTGGGCACATAGAAGAACCACTCTT
JMSF029D13+           GGTTGGGTCTGTCGCCGTTTCTGTACTTGCGATCTCTGGGCACATAGAAGAACCACTCTT
                      ____________________________________________________________
consensus             GGTTGGGTCTGTCGCCGTTTCTGTACTTGCGATCTCTGGGCACATAGAAGAACCACTCTT
 
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JMSF047L14+           TTTCCCCTATAGCTGCCAATGCAGGGAGTTCCCAAGGGTCGTAGCGATAAAGATCAAGAA
JMSF029D13+           TCTCCCCTATAGCTGCCAATGCAGGGAGTTCCCAAGGGTCGTAGCGATAAAGATCAAGAA
                      ____________________________________________________________
consensus             TTTCCCCTATAGCTGCCAATGCAGGGAGTTCCCAAGGGTCGTAGCGATAAAGATCAAGAA
 
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JMSF047L14+           AAGTGATGAGTTCTACGTTGAAACGCTTGCCTTCCACCTTCCGCCGGAGATAGAATTCGA
JMSF029D13+           AAGTGATGAGTTCTACGTTGAAACGCTTGCCTTCCACCTTCCGCCGGAGATAGAATTCGA
                      ____________________________________________________________
consensus             AAGTGATGAGTTCTACGTTGAAACGCTTGCCTTCCACCTTCCGCCGGAGATAGAATTCGA
 
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JMSF047L14+           CGAGCTCTTCCTCCGTGGGGTGGAAGCGGAATCCGGGCATCACCATGTCGTGTTCGTGGT
JMSF029D13+           CGAGCTCTTCCTCCGTGGGGTGGAAGCGGAATCCGGGCATCACCANGTCGTGTTCGTGGT
                      ____________________________________________________________
consensus             CGAGCTCTTCCTCCGTGGGGTGGAAGCGGAATCCGGGCATCACCATGTCGTGTTCGTGGT
 
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JMSF047L14+           CGTCGGCGGCGGCGGCGGCCGCCTCCTCCTCAGTGTTCTTCTGGCACCTCTCATCTTGGT
JMSF029D13+           CGTCGGCGGCGGCGGCGGCCGCCTCCTCCTCAGTGTTCTTCTGGCACCTCTCATCTTGGT
                      ____________________________________________________________
consensus             CGTCGGCGGCGGCGGCGGCCGCCTCCTCCTCAGTGTTCTTCTGGCACCTCTCATCTTGGT
 
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JMSF047L14+           TCTGTTGGCTCATTTTTTCTGGCAAAACTGCCATAAAATTAACGAAGATCCCAGAAATTT
JMSF029D13+           TCTGTTGGCTCATTTTTTCTGGCAAAACTGCCATAAAATTAACGAAGATCCCAGAAATTT
                      ____________________________________________________________
consensus             TCTGTTGGCTCATTTTTTCTGGCAAAACTGCCATAAAATTAACGAAGATCCCAGAAATTT
 
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JMSF047L14+           AATTGAAGCTTAATTAGCTTTGCTTGCTTTTTCACCAAGTCTCTAAATTCTGGCGAGTCT
JMSF029D13+           AATTGAAGCTTAATTAGCTTTGCTTGCTTTTTCACCAAGTCTCTAAATTCTGGCGAGTCT
                      ____________________________________________________________
consensus             AATTGAAGCTTAATTAGCTTTGCTTGCTTTTTCACCAAGTCTCTAAATTCTGGCGAGTCT
 
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JMSF047L14+           TTAGCTGAGCTTTTTAGGCCTTCGTCTTCCCCCCCTTTTTATACTACATGATAGGGTACG
JMSF029D13+           TTAGCTGAGCTTTTTAGGCCTTCGTCTTCCCCCCCTTTTTATACTACATGATAGGGTACG
                      ____________________________________________________________
consensus             TTAGCTGAGCTTTTTAGGCCTTCGTCTTCCCCCCCTTTTTATACTACATGATAGGGTACG
 
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JMSF047L14+           ATAGAGAGAGGGTGGACTAGAAGAGAGAGAGAGAGAGAGAGATGGTGAAAATTGTGAGAA
JMSF029D13+           ATAGAGAGAGGGTGGACTAGAAGAGAGAGAGAGAGAGAGAGATGGTGAAAATTGTGAGAA
                      ____________________________________________________________
consensus             ATAGAGAGAGGGTGGACTAGAAGAGAGAGAGAGAGAGAGAGATGGTGAAAATTGTGAGAA
 
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JMSF047L14+           GGGGGAAGATAAAGAGATTATTCAAAATGTCGCACTCATCACTCTGCTCTCAGAATTCTG
JMSF029D13+           GGGGGAAGATAAAGAGATTATTCAAAATGTCGCACTCATCACTCTGCTCTCAGAATTCTG
                      ____________________________________________________________
consensus             GGGGGAAGATAAAGAGATTATTCAAAATGTCGCACTCATCACTCTGCTCTCAGAATTCTG
 
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JMSF047L14+           CAGGCAAGTCTTCTGGTCTTTTCTCTCTCTCTCCCCACTGGGACTTGAGAACAAAACT  
JMSF029D13+           CAGGCAAGTCTTCTGGTCTTTTCTCTCTCTCTCCCCACTGGGACTTGAGAACAAAACTTC
                      ____________________________________________________________
consensus             CAGGCAAGTCTTCTGGTCTTTTCTCTCTCTCTCCCCACTGGGACTTGAGAACAAAACTTC