Contig 002294:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+                                                               CAAAACCT
                      ____________________________________________________________
consensus                                                                 CAAAACCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           CCATCGCTGCTGCTCGATATCGTTATACTTCTCATGCTAGGTGAGAAGTGCAGCTGCATC
                      ____________________________________________________________
consensus             CCATCGCTGCTGCTCGATATCGTTATACTTCTCATGCTAGGTGAGAAGTGCAGCTGCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           TTCCTCCCTCCACAACCGCCACGTTCGCTACCACCTCTATTCGTAGCCGAATCCAATTCC
JMSF029A24+                   TCCACAACCGCCACGTTCGCTACCACCTCTATTCGTAGCCGAATCCAATTCC
                      ____________________________________________________________
consensus             TTCCTCCCTCCACAACCGCCACGTTCGCTACCACCTCTATTCGTAGCCGAATCCAATTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           AATCCTCNCCGCCCACAACCCTAGATGAAAGGGCAGCACCACCACCGTCGGCGCCGTCTC
JMSF029A24+           AATCCTCCCCGCCCACAACCCTAGATGAAAGGGCAGCACCACCACCGTCGGCGCCGTCTC
                      ____________________________________________________________
consensus             AATCCTCCCCGCCCACAACCCTAGATGAAAGGGCAGCACCACCACCGTCGGCGCCGTCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           CACCGCCGCAATTATTCTTATTCTTCCTCTGCGCAACAACACAGAATGCTCCACTACTCA
JMSF029A24+           CACCGCCGCAATTATTCTTATTCTTCCTCTGCGCAACAACACAGAATGCTCCACTACTCA
                      ____________________________________________________________
consensus             CACCGCCGCAATTATTCTTATTCTTCCTCTGCGCAACAACACAGAATGCTCCACTACTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           ACATCAGATCCGCCCCCGCGGCAATTCAACAATTCCCCGGCCTCTTCCGGGACCAACGCA
JMSF029A24+           ACATCAGATCCGCCCCCGCGGCAATTCAACAATTCCCCGGCCTCTTCCGGGACCAACGCA
                      ____________________________________________________________
consensus             ACATCAGATCCGCCCCCGCGGCAATTCAACAATTCCCCGGCCTCTTCCGGGACCAACGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           TTGGATTTCCCAATTCAACGCCGCTTCCTTTTCCTCCCCTATAAAATGCCTATCACTATA
JMSF029A24+           TTGGATTTCCCAATTCAACGCCGCTTCCTTTTCCTCCCCTATAAAATGCCTATCACTATA
                      ____________________________________________________________
consensus             TTGGATTTCCCAATTCAACGCCGCTTCCTTTTCCTCCCCTATAAAATGCCTATCACTATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           TATGATGAAAACGAGGAATTCCGCCTAATTTATTGCACTTTCTCAATCTATACGCACACG
JMSF016G04+                                         TATTGCACTTTCTCAATCTATACGCACACG
JMSF029A24+           TATGATGAAAACGAGGAATTCCGCCTAATTTATTGCACTTTCTCAATCTATACGCACACG
                      ____________________________________________________________
consensus             TATGATGAAAACGAGGAATTCCGCCTAATTTATTGCACTTTCTCAATCTATACGCACACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           GAGCCTATTGATTGTGCAATGTCTCTGAATTCATGAAATCTGTCCGTCTCCACATATCAA
JMSF016G04+           GAGCCTATTGATTGTGCAATGTCTCTGAATTCATGAAATCTGTCCGTCTCCACAT----A
JMSF029A24+           GAGCCTATTGATTGTGCAATGTCTCTGAATTCATGAAATCTGTCCGTCTCCACATATCAA
                      ____________________________________________________________
consensus             GAGCCTATTGATTGTGCAATGTCTCTGAATTCATGAAATCTGTCCGTCTCCACATATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           TCAATCAATCAAAACAATTTCAATCTGGCAATAATTGTATTAATAAATAATAATACAATT
JMSF016G04+           TCAATCAATCAAAACAATTTCAATCTGGCAATAATTGTATTAATAAATAATAATACAATT
JMSF029A24+           TCAATCAATCAAAACAATTTCAATCTGGCAATAATTGTATTAATAAATAATAATACAATT
                      ____________________________________________________________
consensus             TCAATCAATCAAAACAATTTCAATCTGGCAATAATTGTATTAATAAATAATAATACAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112G12+           TCTACATAAACATATTTTTTCTTTGCGATTTCAGCTTCTTTTATGGCGGACGTATTCTC 
JMSF016G04+           TCTACATAAACATATTTTTTCTTTGCGATTTCAGCTTCTTTTATGGCGGACGTATTCTCT
JMSF029A24+           TCTACATAAACATATTTTTTCTTTGCGATTTCAGCTTCTTTTATGGCGGACGTATTCTCT
                      ____________________________________________________________
consensus             TCTACATAAACATATTTTTTCTTTGCGATTTCAGCTTCTTTTATGGCGGACGTATTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF016G04+           CTCCCTGGATCGGGAGAATGAATGT                                   
JMSF029A24+           CTCCCTGGATCGGGAGAATGAATGTAGAGAGAGAGAAAGTAGAAGAAATGGGGGCAGATC
                      ____________________________________________________________
consensus             CTCCCTGGATCGGGAGAATGAATGTAGAGAGAGAGAAAGTAGAAGAAATGGGGGCAGATC