| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF001B24 | Sequence | 287 | 002290 (4) | emb|CDP04419.1| | 9e-42 | unnamed protein product [Coffea canephora] | 735 | 000321 (5) | ref|XP_009782825.1| | 3e-132 | PREDICTED: aminomethyltransferase, mitochondrial [Nicotiana sylvestris] ref|XP_0 |
| JMSF002D04 | Sequence | 321 | 002290 (4) | emb|CDP04419.1| | 3e-40 | unnamed protein product [Coffea canephora] | 746 | 000321 (5) | ref|XP_009782825.1| | 4e-143 | PREDICTED: aminomethyltransferase, mitochondrial [Nicotiana sylvestris] ref|XP_0 |
| JMSF015M03 | Sequence | 511 | 002290 (4) | ref|XP_002272701.1| | 2e-94 | PREDICTED: aminomethyltransferase, mitochondrial [Vitis vinifera] ref|XP_0106553 | 788 | 000321 (5) | ref|XP_010042063.1| | 3e-140 | PREDICTED: aminomethyltransferase, mitochondrial [Eucalyptus grandis] |
| JMSF028K17 | Sequence | 653 | 002290 (4) | sp|P93256.1|GCST_MESCR | 2e-69 | RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine clea | 703 | 000321 (5) | ref|XP_009782825.1| | 2e-145 | PREDICTED: aminomethyltransferase, mitochondrial [Nicotiana sylvestris] ref|XP_0 |
This contig is upended
. : . : . : . : . : . :
JMSF015M03+ TGCATTCANGACGAGGTATATGTGATCGTTAGTGACCT
____________________________________________________________
consensus TGCATTCANGACGAGGTATATGTGATCGTTAGTGACCT
. : . : . : . : . : . :
JMSF015M03+ TGGTGATCACGGAATCATCGATCGCACCTCCCTTCTCGTTCGTGAAAACGGTTAAAGTCC
____________________________________________________________
consensus TGGTGATCACGGAATCATCGATCGCACCTCCCTTCTCGTTCGTGAAAACGGTTAAAGTCC
. : . : . : . : . : . :
JMSF015M03+ CCGTCCCGGGAGCAAGCCCAACAACATCTGCAATCACGAGCTTTTCAAGGAACGGGATGC
JMSF028K17+ GGGAGCAAGCCCAACAACATCTGCAATCACGAGCTTTTCAAGGAACGGGATGC
____________________________________________________________
consensus CCGTCCCGGGAGCAAGCCCAACAACATCTGCAATCACGAGCTTTTCAAGGAACGGGATGC
. : . : . : . : . : . :
JMSF015M03+ AATCTTTCCCCTTGAGGCTCAGACCACACATATGCGCAACGTCAAAGAGGCTGCCATTCT
JMSF028K17+ AATCTTTCCCCTTGAGGCTCAGACCACACATATGCGCAACGTCAAAGAGGCTGCCATTCT
____________________________________________________________
consensus AATCTTTCCCCTTGAGGCTCAGACCACACATATGCGCAACGTCAAAGAGGCTGCCATTCT
. : . : . : . : . : . :
JMSF015M03+ CCCTGCAATTCACCGTCGAGTCCATAATCGAGTCCTTATACTGAATTGGCATACTCCAAC
JMSF001B24+ TTCACCGTCGAGTCCATAATCGAGTCCTTATACTGAATTGGCATACTCCAAC
JMSF002D04+ CGAGTCCATAATCGAGTCCTTATACTGAATTGGCATACTCCAAC
JMSF028K17+ CCCTGCAATTCACCGTCGAGTCCATAATCGAGTCCTTATACTGAATTGGCATACTCCAAC
____________________________________________________________
consensus CCCTGCAATTCACCGTCGAGTCCATAATCGAGTCCTTATACTGAATTGGCATACTCCAAC
. : . : . : . : . : . :
JMSF015M03+ CAGCAAACGGCACCATTTTGCCTCCATTGGCAACATGGAAGTCATACAGAGCAGTCTTCT
JMSF001B24+ CAGCAAACGGCACCATTTTGCCTCCATTGGCAACATGGAAGTCATACAGAGCAGTCTTCT
JMSF002D04+ CAGCAAACGGCACCATTTTGCCTCCATTGGCAACATGGAAGTCATACAGAGCAGTCTTCT
JMSF028K17+ CAGCAAACGGCACCATTTTGCCTCCATTGGCAACATGGAAGTCATACAGAGCAGTCTTCT
____________________________________________________________
consensus CAGCAAACGGCACCATTTTGCCTCCATTGGCAACATGGAAGTCATACAGAGCAGTCTTCT
. : . : . : . : . : . :
JMSF015M03+ TAAGATCAGCATCCGAGGCAAAGCATCTTCGAGCAATAGTCTTCTTGTCAGCCTGCACCA
JMSF001B24+ TAAGATCAGCATCCGAGGCAAAGCATCTTCGAGCAATAGTCTTCTTGTCAGCCTGCACCA
JMSF002D04+ TAAGATCAGCATCCGAGGCAAAGCATCTTCGAGCAATAGTCTTCTTGTCAGCCTGCACCA
JMSF028K17+ TAAGATCAGCATCCGAGGCAAAGCATCTTCGAGCAATAGTCTTCTTGTCAGCCTGCACCA
____________________________________________________________
consensus TAAGATCAGCATCCGAGGCAAAGCATCTTCGAGCAATAGTCTTCTTGTCAGCCTGCACCA
. : . : . : . : . : . :
JMSF015M03+ AGCGGCGAGTAATCGATTGTCCAAGTTGCCACAATCCTCCTCCCCTCATCTTCACAAAAT
JMSF001B24+ AGCGGCGAGTAATCGATTGTCCAAGTTGCCACAATCCTCCTCCCCTCATCTTCACAAAAT
JMSF002D04+ AGCGGCGAGTAATCGATTGTCCAAGTTGCCACAATCCTCCTCCCCTCATCTTCACAAAAT
JMSF028K17+ AGCGGCGAGTAATCGATTGTCCAAGTTGCCACAATCCTCCTCCCCTCATCTTCACAAAAT
____________________________________________________________
consensus AGCGGCGAGTAATCGATTGTCCAAGTTGCCACAATCCTCCTCCCCTCATCTTCACAAAAT
. : . : . : . : . : . :
JMSF015M03+ ATCCTAT
JMSF001B24+ ATCCTATCAGATGATAGTAT
JMSF002D04+ ATCCTATCAGATGATAGTAT
JMSF028K17+ ATCCTATCAGATGATAGTATCTGATCAACACAGATCAAAGGTTTCCTCTCTATCAAAATC
____________________________________________________________
consensus ATCCTATCAGATGATAGTATCTGATCAACACAGATCAAAGGTTTCCTCTCTATCAAAATC
. : . : . : . : . : . :
JMSF028K17+ TGATGTTCAAAATGCAATCTTTCCTGTTCTAATCCATTCCAAATTTCAACCCTTTTCATA
____________________________________________________________
consensus TGATGTTCAAAATGCAATCTTTCCTGTTCTAATCCATTCCAAATTTCAACCCTTTTCATA
. : . : . : . : . : . :
JMSF028K17+ AACCCAACCCCAAAAACAAAAATGCTGGGCCTATCCAACCATTCCCCAGCAATACAGATC
____________________________________________________________
consensus AACCCAACCCCAAAAACAAAAATGCTGGGCCTATCCAACCATTCCCCAGCAATACAGATC
. : . : . : . : . : . :
JMSF028K17+ CAGAAAACATTCTCTATAACAAACTCAGATTCACATTCACGCTGATCTCCAATAACCCAG
____________________________________________________________
consensus CAGAAAACATTCTCTATAACAAACTCAGATTCACATTCACGCTGATCTCCAATAACCCAG
. : . : . : . : . : . :
JMSF028K17+ AAAGGCAAGTCATGAAAAGAACAGATAAAACGCAGACAACACGAATCAGAGTGTCAGATC
____________________________________________________________
consensus AAAGGCAAGTCATGAAAAGAACAGATAAAACGCAGACAACACGAATCAGAGTGTCAGATC