Contig 002287:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028E16+                                   GAGAGACTATAGTGCAGAAAAACAAAAGTAATTTG
JMSF028E16-                                    GAGAGACTATAGTGCAGAAAAACAAAAGTAATTTG
                      ____________________________________________________________
consensus                                      GAGAGACTATAGTGCAGAAAAACAAAAGTAATTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028E16+          TTCCATAGCACCACTAATAATCAAACAAATGTCCCAACCACCTCCGAGAGCACAGTGGGA
JMSF028E16-           TTCCATAGCACCACTAATAATCAAACAAATGTCCCAACCACCTCCGAGAGCACAGTGGGA
                      ____________________________________________________________
consensus             TTCCATAGCACCACTAATAATCAAACAAATGTCCCAACCACCTCCGAGAGCACAGTGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028E16+          AAATCCCCTCTACTAAGGGCACACAAAACAATCATAACCTCAACGCACTCATTGAGTCAC
JMSF028E16-           AAATCCCCTCTACTAAGGGCACACAAAACAATCATAACCTCAACGCACTCATTGAGTCAC
                      ____________________________________________________________
consensus             AAATCCCCTCTACTAAGGGCACACAAAACAATCATAACCTCAACGCACTCATTGAGTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028E16+          TGTACTTTATTTTAACATTGTACGAAAGAAATTGTAAGTCTTCACATGCGCGCGGAGAAA
JMSF028E16-           TGTACTTTATTTTAACATTGTACGAAAGAAATTGTAAGTCTTCACATGCGCGCGGAGAAA
                      ____________________________________________________________
consensus             TGTACTTTATTTTAACATTGTACGAAAGAAATTGTAAGTCTTCACATGCGCGCGGAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028E16+          ATCCATCGCCATGGCATTGCTAAAAGCTCAACAGCCCATACAAGTAAAGCTAACATGCTG
JMSF028E16-           ATCCATCGCCATGGCATTGCTAAAAGCTCAACAGCCCATACAAGTAAAGCTAACATGCTG
                      ____________________________________________________________
consensus             ATCCATCGCCATGGCATTGCTAAAAGCTCAACAGCCCATACAAGTAAAGCTAACATGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028E16+          CCTAGCCTAACCAACAGCATACGAATATCACAAAATTTAGATCTTCCAAATTTCAATACA
JMSF028E16-           CCTAGCCTAACCAACAGCATACGAATATCACAAAATTTAGATCTTCCAAATTTCAATACA
                      ____________________________________________________________
consensus             CCTAGCCTAACCAACAGCATACGAATATCACAAAATTTAGATCTTCCAAATTTCAATACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028E16+          AAAAGTACCCATACAACAAGAGTAACAATAATTGAAGGAAAACAGAACAAAATTA     
JMSF028E16-           AAAAGTACCCATACAACAAGAGTAACAATAATTGAAGGAAAACAGAACAAAATTAATCTT
                      ____________________________________________________________
consensus             AAAAGTACCCATACAACAAGAGTAACAATAATTGAAGGAAAACAGAACAAAATTAATCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028E16-           ACTATAAGGGATTCTCCCACAGCACGAGATGAATAACTCAACAAATCCCCAAAAAAAAAA
                      ____________________________________________________________
consensus             ACTATAAGGGATTCTCCCACAGCACGAGATGAATAACTCAACAAATCCCCAAAAAAAAAA