Contig 002285:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028C09Sequence712002285 (2)emb|CDP03683.1|5e-68unnamed protein product [Coffea canephora]697002285 (2)emb|CDP03683.1|4e-68unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF028C09+ GGCACTTCTCGTTATTCGTTAATCTTCTTCAGTTCTTCATTCTCCTCTCATC
                      ____________________________________________________________
consensus GGCACTTCTCGTTATTCGTTAATCTTCTTCAGTTCTTCATTCTCCTCTCATC
 
. : . : . : . : . : . :
rJMSF028C09+ TTCGGAATTCCTAAGGGTGATATAATGGCCGGAAAAGGTGGGAAGGGGCTTTTGGCCGGA
                      ____________________________________________________________
consensus TTCGGAATTCCTAAGGGTGATATAATGGCCGGAAAAGGTGGGAAGGGGCTTTTGGCCGGA
 
. : . : . : . : . : . :
rJMSF028C09+ AAGACAACGGCGGCTGCGGCGGCGGCGGCAGCCAGCAAGGATAAGGACAAGAAAAGGCCG
JMSF028C09- GCTGCGGCGGCGGCGGCAGCCAGCAAGGATAAGGACAAGAAAAGGCCG
                      ____________________________________________________________
consensus AAGACAACGGCGGCTGCGGCGGCGGCGGCAGCCAGCAAGGATAAGGACAAGAAAAGGCCG
 
. : . : . : . : . : . :
rJMSF028C09+ GTCTCTCGGTCTTCTCGCGCCGGTCTCCAGTTTCCGGTGGGCAGGATTCACCGTCAGCTG
JMSF028C09- GTCTCTCGGTCTTCTCGCGCCGGTCTCCAGTTTCCGGTGGGCAGGATTCACCGTCAGCTG
                      ____________________________________________________________
consensus GTCTCTCGGTCTTCTCGCGCCGGTCTCCAGTTTCCGGTGGGCAGGATTCACCGTCAGCTG
 
. : . : . : . : . : . :
rJMSF028C09+ AAGACCCGAACCTCAGCCCACGGGAGAGTTGGAGCAACGGCGGCGGTTTACACCGCCGCA
JMSF028C09- AAGACCCGAACCTCAGCCCACGGGAGAGTTGGAGCAACGGCGGCGGTTTACACCGCCGCA
                      ____________________________________________________________
consensus AAGACCCGAACCTCAGCCCACGGGAGAGTTGGAGCAACGGCGGCGGTTTACACCGCCGCA
 
. : . : . : . : . : . :
rJMSF028C09+ ATCCTGGAGTATTTGACGGCGGAGGTGCTGGAGTTGGCCGGAAACGCCAGCAAAGATCTG
JMSF028C09- ATCCTGGAGTATTTGACGGCGGAGGTGCTGGAGTTGGCCGGAAACGCCAGCAAAGATCTG
                      ____________________________________________________________
consensus ATCCTGGAGTATTTGACGGCGGAGGTGCTGGAGTTGGCCGGAAACGCCAGCAAAGATCTG
 
. : . : . : . : . : . :
rJMSF028C09+ AAGGTGAAGAGAATCACGCCAAGGCACTTGCAGCTCGCCATCCGCGGCGATGAAGAGCTC
JMSF028C09- AAGGTGAAGAGAATCACGCCAAGGCACTTGCAGCTCGCCATCCGCGGCGATGAAGAGCTC
                      ____________________________________________________________
consensus AAGGTGAAGAGAATCACGCCAAGGCACTTGCAGCTCGCCATCCGCGGCGATGAAGAGCTC
 
. : . : . : . : . : . :
rJMSF028C09+ GACACCCTCATCAAAGGAACCATCGCCGGCGGCGGCGTCATCCCTCACATTCACAAATCC
JMSF028C09- GACACCCTCATCAAAGGAACCATCGCCGGCGGCGGCGTCATCCCTCACATTCACAAATCC
                      ____________________________________________________________
consensus GACACCCTCATCAAAGGAACCATCGCCGGCGGCGGCGTCATCCCTCACATTCACAAATCC
 
. : . : . : . : . : . :
rJMSF028C09+ CTCATCAACAAAAC
JMSF028C09- CTCATCAACAAAACCAACAAGGAATAATCAACTTCTTCTTCTTCAGGGGCTCTGCCGCCT
                      ____________________________________________________________
consensus CTCATCAACAAAACCAACAAGGAATAATCAACTTCTTCTTCTTCAGGGGCTCTGCCGCCT
 
. : . : . : . : . : . :
JMSF028C09- TAATCCTAGCTTGCTCGTATGCCGGTGTTCATTTAGCATAGTTTTCTTCAATTTATAGGC
                      ____________________________________________________________
consensus TAATCCTAGCTTGCTCGTATGCCGGTGTTCATTTAGCATAGTTTTCTTCAATTTATAGGC
 
. : . : . : . : . : . :
JMSF028C09- TTGTTTTTACTTTCATTTGTTAGGATTAACGAACATTGTTTGTTGGATAAGATTAACTTT
                      ____________________________________________________________
consensus TTGTTTTTACTTTCATTTGTTAGGATTAACGAACATTGTTTGTTGGATAAGATTAACTTT
 
. : . : . : . : . : . :
JMSF028C09- ACATTTGATATGAACAATGTATTACATTGTAATGCTAGGCATGTTTATCTATTCTAGTAC
                      ____________________________________________________________
consensus ACATTTGATATGAACAATGTATTACATTGTAATGCTAGGCATGTTTATCTATTCTAGTAC