Contig 002279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS126C08Sequence589002279 (4)ref|XP_006469773.1|154PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
JMSF025D07Sequence639002279 (4)ref|XP_006469773.1|154PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]758012629 (3)ref|XP_006467327.1|115PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
JMSF027I11Sequence632002279 (4)ref|XP_006469773.1|155PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]656012629 (3)ref|XP_006489961.1|92.0PREDICTED: uncharacterized protein LOC102608276 [Citrus sinensis]
JMSF050M03Sequence641002279 (4)ref|XP_006469773.1|157PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]601012629 (3)ref|XP_006489961.1|82.0PREDICTED: uncharacterized protein LOC102608276 [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050M03+ GAGTCCCCGGCCTAGAATGATAGGGCCAATCTCTTCGCCTT
JMFS126C08+ TAGAATGATAGGGCCAATCTCTTCGCCTT
JMSF025D07+ GCCTAGAATGATAGGGCCAATCTCTTCGCCTT
JMSF027I11+ TAGAATGATAGGGCCAATCTCTTCGCCTT
                      ____________________________________________________________
consensus GAGTCCCCGGCCTAGAATGATAGGGCCAATCTCTTCGCCTT
 
. : . : . : . : . : . :
JMSF050M03+ GATTGAGAATAAAGAAGTTTGTTGTGGTGACACATGTCATTATCAGATCAACACATTTAC
JMFS126C08+ GATTGAGAATAAAGAAGTTTGTTGTGGTGACACATGTCATTATCAGATCAACACATTTAC
JMSF025D07+ GATTGAGAATAAAGAAGTTTGTTGTGGTGACACATGTCATTATCAGATCAACACATTTAC
JMSF027I11+ GANTGAGAATAAAGAAGTTTGTNGTGGTGACACATGTCATTATCAGATCAACACATTTAC
                      ____________________________________________________________
consensus GATTGAGAATAAAGAAGTTTGTTGTGGTGACACATGTCATTATCAGATCAACACATTTAC
 
. : . : . : . : . : . :
JMSF050M03+ TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
JMFS126C08+ TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
JMSF025D07+ TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
JMSF027I11+ TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
                      ____________________________________________________________
consensus TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
 
. : . : . : . : . : . :
JMSF050M03+ CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
JMFS126C08+ CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
JMSF025D07+ CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
JMSF027I11+ CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
                      ____________________________________________________________
consensus CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
 
. : . : . : . : . : . :
JMSF050M03+ AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCCCGGGACGAA
JMFS126C08+ AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCTCGGGACGAA
JMSF025D07+ AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCTCGGGACGAA
JMSF027I11+ AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCTCGGGACGAA
                      ____________________________________________________________
consensus AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCTCGGGACGAA
 
. : . : . : . : . : . :
JMSF050M03+ AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
JMFS126C08+ AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
JMSF025D07+ AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
JMSF027I11+ AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
                      ____________________________________________________________
consensus AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
 
. : . : . : . : . : . :
JMSF050M03+ CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
JMFS126C08+ CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
JMSF025D07+ CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
JMSF027I11+ CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
                      ____________________________________________________________
consensus CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
 
. : . : . : . : . : . :
JMSF050M03+ CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
JMFS126C08+ CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
JMSF025D07+ CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
JMSF027I11+ CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
                      ____________________________________________________________
consensus CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
 
. : . : . : . : . : . :
JMSF050M03+ ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTACACTCAATAATGTCCCA
JMFS126C08+ ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTACACTCAATAATGTCCCA
JMSF025D07+ ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTACACTCAATAATGTCCCA
JMSF027I11+ ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTNCACTCAATAATGTCCCA
                      ____________________________________________________________
consensus ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTACACTCAATAATGTCCCA
 
. : . : . : . : . : . :
JMSF050M03+ GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAATGGAGATGGTGA
JMFS126C08+ GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAATGGAGATGGTGA
JMSF025D07+ GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAATGGAGATGGTGA
JMSF027I11+ GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAANGGAGATGGTGA
                      ____________________________________________________________
consensus GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAATGGAGATGGTGA
 
. : . : . : . : . : . :
JMSF050M03+ AACTTACTGCCTTTGTTTTCTTTATTCTACAGAGAGTTTGGAGAGGCAAGGAGGAAA
JMFS126C08+ AACTTACTGCCTTTGTTTTC
JMSF025D07+ AACTTACTGCCTTTGTTTTCTTTATTCTACAGAGAGTTTGGAGAGGCAAGGAGGAAA
JMSF027I11+ AACTTACTGCCTTTGTTTTCTTTATTCTACAGAGAGTTTGGAGAGGCAAGGAGGAAATCC
                      ____________________________________________________________
consensus AACTTACTGCCTTTGTTTTCTTTATTCTACAGAGAGTTTGGAGAGGCAAGGAGGAAATCC