| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS126C08 | Sequence | 589 | 002279 (4) | ref|XP_006469773.1| | 154 | PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis] | |||||
| JMSF025D07 | Sequence | 639 | 002279 (4) | ref|XP_006469773.1| | 154 | PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis] | 758 | 012629 (3) | ref|XP_006467327.1| | 115 | PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis] |
| JMSF027I11 | Sequence | 632 | 002279 (4) | ref|XP_006469773.1| | 155 | PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis] | 656 | 012629 (3) | ref|XP_006489961.1| | 92.0 | PREDICTED: uncharacterized protein LOC102608276 [Citrus sinensis] |
| JMSF050M03 | Sequence | 641 | 002279 (4) | ref|XP_006469773.1| | 157 | PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis] | 601 | 012629 (3) | ref|XP_006489961.1| | 82.0 | PREDICTED: uncharacterized protein LOC102608276 [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF050M03+ GAGTCCCCGGCCTAGAATGATAGGGCCAATCTCTTCGCCTT
JMFS126C08+ TAGAATGATAGGGCCAATCTCTTCGCCTT
JMSF025D07+ GCCTAGAATGATAGGGCCAATCTCTTCGCCTT
JMSF027I11+ TAGAATGATAGGGCCAATCTCTTCGCCTT
____________________________________________________________
consensus GAGTCCCCGGCCTAGAATGATAGGGCCAATCTCTTCGCCTT
. : . : . : . : . : . :
JMSF050M03+ GATTGAGAATAAAGAAGTTTGTTGTGGTGACACATGTCATTATCAGATCAACACATTTAC
JMFS126C08+ GATTGAGAATAAAGAAGTTTGTTGTGGTGACACATGTCATTATCAGATCAACACATTTAC
JMSF025D07+ GATTGAGAATAAAGAAGTTTGTTGTGGTGACACATGTCATTATCAGATCAACACATTTAC
JMSF027I11+ GANTGAGAATAAAGAAGTTTGTNGTGGTGACACATGTCATTATCAGATCAACACATTTAC
____________________________________________________________
consensus GATTGAGAATAAAGAAGTTTGTTGTGGTGACACATGTCATTATCAGATCAACACATTTAC
. : . : . : . : . : . :
JMSF050M03+ TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
JMFS126C08+ TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
JMSF025D07+ TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
JMSF027I11+ TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
____________________________________________________________
consensus TGTCAAACCCCATCTTTAGCATAACATCCTTTAAGTAACTCATTCCACTCTATAATAGGC
. : . : . : . : . : . :
JMSF050M03+ CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
JMFS126C08+ CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
JMSF025D07+ CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
JMSF027I11+ CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
____________________________________________________________
consensus CTTGCTTAAATCTAATTTTAGAGCAGCAAATCCCTCACGGCCTTGAGTTTTCCTCTTCAA
. : . : . : . : . : . :
JMSF050M03+ AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCCCGGGACGAA
JMFS126C08+ AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCTCGGGACGAA
JMSF025D07+ AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCTCGGGACGAA
JMSF027I11+ AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCTCGGGACGAA
____________________________________________________________
consensus AAAATGTTGTAATTCAAAAGCCACCATAATGTTATCTGTGATTAGTCGCCTCGGGACGAA
. : . : . : . : . : . :
JMSF050M03+ AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
JMFS126C08+ AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
JMSF025D07+ AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
JMSF027I11+ AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
____________________________________________________________
consensus AGCACTCTGATTGATGGAAACTATCCCCTCCAGAATAGGCTTTAGACGATTTGCCAAAGC
. : . : . : . : . : . :
JMSF050M03+ CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
JMFS126C08+ CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
JMSF025D07+ CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
JMSF027I11+ CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
____________________________________________________________
consensus CTTCGTGAGGATTTTATAGGCAACTGTACACCGAGCGATTGGCCTGAGATCCCCCATAGA
. : . : . : . : . : . :
JMSF050M03+ CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
JMFS126C08+ CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
JMSF025D07+ CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
JMSF027I11+ CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
____________________________________________________________
consensus CTCCGGCTTGGGTTTCTTTGGGATTAACACTATGTGTGTAGTGTTGAGTCCCCTCGGCAA
. : . : . : . : . : . :
JMSF050M03+ ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTACACTCAATAATGTCCCA
JMFS126C08+ ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTACACTCAATAATGTCCCA
JMSF025D07+ ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTACACTCAATAATGTCCCA
JMSF027I11+ ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTNCACTCAATAATGTCCCA
____________________________________________________________
consensus ATGGCCAGTTGAGATGAAGTTATTGCACATGTGAAACATACTACACTCAATAATGTCCCA
. : . : . : . : . : . :
JMSF050M03+ GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAATGGAGATGGTGA
JMFS126C08+ GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAATGGAGATGGTGA
JMSF025D07+ GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAATGGAGATGGTGA
JMSF027I11+ GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAANGGAGATGGTGA
____________________________________________________________
consensus GTAAGATTGGAAGGTAGAGAATCAAAGTCTGAGAGTGAAATGAATGAATGGAGATGGTGA
. : . : . : . : . : . :
JMSF050M03+ AACTTACTGCCTTTGTTTTCTTTATTCTACAGAGAGTTTGGAGAGGCAAGGAGGAAA
JMFS126C08+ AACTTACTGCCTTTGTTTTC
JMSF025D07+ AACTTACTGCCTTTGTTTTCTTTATTCTACAGAGAGTTTGGAGAGGCAAGGAGGAAA
JMSF027I11+ AACTTACTGCCTTTGTTTTCTTTATTCTACAGAGAGTTTGGAGAGGCAAGGAGGAAATCC
____________________________________________________________
consensus AACTTACTGCCTTTGTTTTCTTTATTCTACAGAGAGTTTGGAGAGGCAAGGAGGAAATCC