Contig 002278:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A15Sequence533002278 (5)ref|XP_006348687.1|7e-78PREDICTED: probable inactive purple acid phosphatase 1-like [Solanum tuberosum]720001077 (5)ref|XP_009788711.1|5e-135PREDICTED: probable inactive purple acid phosphatase 1 [Nicotiana sylvestris]
JMFF014A24Sequence536002278 (5)ref|XP_006348687.1|9e-79PREDICTED: probable inactive purple acid phosphatase 1-like [Solanum tuberosum]810001077 (5)ref|XP_009788711.1|1e-156PREDICTED: probable inactive purple acid phosphatase 1 [Nicotiana sylvestris]
JMFF031O02Sequence544002278 (5)ref|XP_006348687.1|8e-81PREDICTED: probable inactive purple acid phosphatase 1-like [Solanum tuberosum]792001077 (5)ref|XP_009788711.1|2e-130PREDICTED: probable inactive purple acid phosphatase 1 [Nicotiana sylvestris]
JMSF014O14Sequence455002278 (5)ref|XP_006348687.1|7e-39PREDICTED: probable inactive purple acid phosphatase 1-like [Solanum tuberosum]750001077 (5)ref|XP_009788711.1|2e-147PREDICTED: probable inactive purple acid phosphatase 1 [Nicotiana sylvestris]
JMSF027H24Sequence652002278 (5)ref|XP_006348687.1|1e-76PREDICTED: probable inactive purple acid phosphatase 1-like [Solanum tuberosum]724001077 (5)ref|XP_009788711.1|6e-135PREDICTED: probable inactive purple acid phosphatase 1 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF031O02+                                                                   CTGG
                      ____________________________________________________________
consensus                                                                     CTGG
 
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JMFF031O02+           GCTAACCGTGGGTATAAAGGTGCGTTTGGATTTGCAAAGGCAACTGTATTCGAGACTGCC
JMFF007A15+                   TGGGTATAAAGGTGCGTTTGGATTTGCAAAGGCAACTGTATTCGAGACTGCC
JMFF014A24+                   TGGGTATAAAGGTGCGTTTGGATTTGCAAAGGCAACTGTATTCGAGACTGCC
JMSF027H24+                   TGGGTATAAAGGTGCGTTTGGANTTGCAAAGGCAACTGTATTCGAGACTGCC
                      ____________________________________________________________
consensus             GCTAACCGTGGGTATAAAGGTGCGTTTGGATTTGCAAAGGCAACTGTATTCGAGACTGCC
 
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JMFF031O02+           ACCAGCTTTGGTGTCGAGAGTCCACCAGTGAACAACACAAAAGAGAAGTCAAATCTCTGA
JMFF007A15+           ACCAGCTTTGGTGTCGAGAGTCCACCAGTGAACAACACAAAAGAGAAGTCAAATCTCTGA
JMFF014A24+           ACCAGCTTTGGTGTCGAGAGTCCACCAGTGAACAACACAAAAGAGAAGTCAAATCTCTGA
JMSF027H24+           ACCAGCTTTGGTGTCGAGAGTCCACCAGTGAACAACACAAAAGAGAAGTCAAATCTCTGA
                      ____________________________________________________________
consensus             ACCAGCTTTGGTGTCGAGAGTCCACCAGTGAACAACACAAAAGAGAAGTCAAATCTCTGA
 
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JMFF031O02+           TTGATCAATTGGAGCTTCAATGATCCTTTCCCCGTGTCTTTGTAACCAGGGCTCGCATAA
JMFF007A15+           TTGATCAATTGGAGCTTCAATGATCCTTTCCCCGTGTCTTTGTAACCAGGGCTCGCATAA
JMFF014A24+           TTGATCAATTGGAGCTTCAATGATCCTTTCCCCGTGTCTTTGTAACCAGGGCTCGCATAA
JMSF027H24+           TTGATCAATTGGAGCTTCAATGATCCTTTCCCCGTGTCTTTGTAACCAGGGCTCGCATAA
                      ____________________________________________________________
consensus             TTGATCAATTGGAGCTTCAATGATCCTTTCCCCGTGTCTTTGTAACCAGGGCTCGCATAA
 
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JMFF031O02+           TTTGCAAATTGATACTTTATGGGTGCTGTACACAATAGTGGCGGAAACATTCTTGGATTT
JMFF007A15+           TTTGCAAATTGATACTTTATGGGTGCTGTACACAATAGTGGCGGAAACATTCTTGGATTT
JMFF014A24+           TTTGCAAATTGATACTTTATGGGTGCTGTACACAATAGTGGCGGAAACATTCTTGGATTT
JMSF014O14+                              TGGGTGCTGTACACAATAGTGGCGGAAACATTCTTGGATTT
JMSF027H24+           TTTGCAAATTGATACTTTATGGGTGCTGTACACAATAGTGGCGGAAACATTCTTGGATTT
                      ____________________________________________________________
consensus             TTTGCAAATTGATACTTTATGGGTGCTGTACACAATAGTGGCGGAAACATTCTTGGATTT
 
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JMFF031O02+           TCACGAACACAAGTTGATTGACTGAAGTTGGCTGGTGAAAATACTCCAATCCAATCATCA
JMFF007A15+           TCACGAACACAAGTTGATTGACTGAAGTTGGCTGGTGAAAATACTCCAATCCAATCATCA
JMFF014A24+           TCACGAACACAAGTTGATTGACTGAAGTTGGCTGGTGAAAATACTCCAATCCAATCATCA
JMSF014O14+           TCACGAACACAAGTTGATTGACTGAAGTTGGCTGGTGAAAATACTCCAATCCAATCATCA
JMSF027H24+           TCACGAACACAAGTTGATTGACTGAAGTTGGCTGGTGAAAATACTCCAATCCAATCATCA
                      ____________________________________________________________
consensus             TCACGAACACAAGTTGATTGACTGAAGTTGGCTGGTGAAAATACTCCAATCCAATCATCA
 
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JMFF031O02+           ATTGAAGGGTTTGACACACTGTATTCTAGAGTAACCCATTCTTGGTTTTGGCCGTTGCCT
JMFF007A15+           ATTGAAGGGTTTGACACACTGTATTCTAGAGTAACCCATTCTTGGTTTTGGCCGTTGCCT
JMFF014A24+           ATTGAAGGGTTTGACACACTGTATTCTAGAGTAACCCATTCTTGGTTTTGGCCGTTGCCT
JMSF014O14+           ATTGAAGGGTTTGACACACTGTATTCTAGAGTAACCCATTCTTGGTTTTGGCCGTTGCCT
JMSF027H24+           ATTGAAGGGTTTGACACACTGTATTCTAGAGTAACCCATTCTTGGTTTTGGCCGTTGCCT
                      ____________________________________________________________
consensus             ATTGAAGGGTTTGACACACTGTATTCTAGAGTAACCCATTCTTGGTTTTGGCCGTTGCCT
 
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JMFF031O02+           CCAAGAACCGAAGGGGTGGCTTTAATGTATGCATCTTTGTCAAAAGCAAGAACCGTCTTA
JMFF007A15+           CCAAGAACCGAAGGGGTGGCTTTAATGTATGCATCTTTGTCAAAAGCAAGAACCGTCTTA
JMFF014A24+           CCAAGAACCGAAGGGGTGGCTTTAATGTATGCATCTTTGTCAAAAGCAAGAACCGTCTTA
JMSF014O14+           CCAAGAACCGAAGGGGTGGCTTTAATGTATGCATCTTTGTCAAAAGCAAGAACCGTCTTA
JMSF027H24+           CCAAGAACCGAAGGGGTGGCTTTAATGTATGCATCTTTGTCAAAAGCAAGAACCGTCTTA
                      ____________________________________________________________
consensus             CCAAGAACCGAAGGGGTGGCTTTAATGTATGCATCTTTGTCAAAAGCAAGAACCGTCTTA
 
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JMFF031O02+           TGAATTGCAATCCTGGCAAGAGGGTGCTCCTTGTGAGATGCTATCACTTGAAGGCTAAGC
JMFF007A15+           TGAATTGCAATCCTGGCAAGAGGGTGCTCCTTGTGAGATGCTATCACTTGAAGGCTAAGC
JMFF014A24+           TGAATTGCAATCCTGGCAAGAGGGTGCTCCTTGTGAGATGCTATCACTTGAAGGCTAAGC
JMSF014O14+           TGAATTGCAATCCTGGCAAGAGGGTGCTCCTTGTGAGATGCTATCACTTGAAGGCTAAGC
JMSF027H24+           TGAATTGCAATCCTGGCAAGAGGGTGCTCCTTGTGAGATGCTATCACTTGAAGGCTAAGC
                      ____________________________________________________________
consensus             TGAATTGCAATCCTGGCAAGAGGGTGCTCCTTGTGAGATGCTATCACTTGAAGGCTAAGC
 
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JMFF031O02+           AGAAACCAGAATATCGGTAACAACTTCTTGGAGATTCCCATTATCAAAGCAGGCATGAAC
JMFF007A15+           AGAAACCAGAATATCGGTAACAACTTCTTGGAGATTCCCATTATCAAAGCAGGCATGAAC
JMFF014A24+           AGAAACCAGAATATCGGTAACAACTTCTTGGAGATTCCCATTATCAAAGCAGGCATGAAC
JMSF014O14+           AGAAACCAGAATATCGGTAACAACTTCTTGGAGATTCCCATTATCAAAGCAGGCATGAAC
JMSF027H24+           AGAAACCAGAATATCGGTAACAACTTCTTGGAGATTCCCATTATCAAAGCAGGCATGAAC
                      ____________________________________________________________
consensus             AGAAACCAGAATATCGGTAACAACTTCTTGGAGATTCCCATTATCAAAGCAGGCATGAAC
 
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JMSF014O14+           ACCCACACTTAACTCAATTCCGTGTAGAAATGAAAAATCTTGAGCAGAAACTATCTCTGC
JMSF027H24+           ACCCACACTTAACTCAATTCCGTGTAGAAATGAAAAATCTTGAGCAGAAACTATCTCTGC
                      ____________________________________________________________
consensus             ACCCACACTTAACTCAATTCCGTGTAGAAATGAAAAATCTTGAGCAGAAACTATCTCTGC
 
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JMSF014O14+           GGAAGTATCTAAAGAGGCAGTGAGTGTGAGGCTCCGTCCCAATGCTAGACGTC       
JMSF027H24+           GGAAGTATCTAAAGAGGCAGTGAGTGTGAGGCTCCGTCCCAATGCTAGACGTCAAAATCC
                      ____________________________________________________________
consensus             GGAAGTATCTAAAGAGGCAGTGAGTGTGAGGCTCCGTCCCAATGCTAGACGTCAAAATCC