Contig 002277:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045F01Sequence632002277 (2)ref|XP_009628621.1|8e-22PREDICTED: uncharacterized protein LOC104118935 isoform X1 [Nicotiana tomentosi583008233 (36)ref|XP_009631630.1|2e-85PREDICTED: glutathione S-transferase F11 [Nicotiana tomentosiformis]
JMSF027H13Sequence652002277 (2)ref|XP_009628623.1|5e-64PREDICTED: uncharacterized protein LOC104118935 isoform X3 [Nicotiana tomentosi818008185 (4)ref|XP_009779557.1|214PREDICTED: uncharacterized protein LOC104228725 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF045F01+                              GTCATCAATATTGTCGGTGAGTTTCACACCCAACAGATTTC
                      ____________________________________________________________
consensus                                GTCATCAATATTGTCGGTGAGTTTCACACCCAACAGATTTC
 
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JMFF045F01+           TGGATGAAGAAGAAATAGATGATGTGCGGTGCCATGTCAGGTACTTTGGGGAAGTTTGAG
                      ____________________________________________________________
consensus             TGGATGAAGAAGAAATAGATGATGTGCGGTGCCATGTCAGGTACTTTGGGGAAGTTTGAG
 
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JMFF045F01+           GAGGCTCCGGCTCTTCTGGAACTTGGCTCGGATCCTTACCGCAAGAGAAACATGACGTTA
                      ____________________________________________________________
consensus             GAGGCTCCGGCTCTTCTGGAACTTGGCTCGGATCCTTACCGCAAGAGAAACATGACGTTA
 
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JMFF045F01+           ACAGTGTCTTGGCAATTGAACCTCCTACAAAAGGCAGATATCTTCAATCAAATAGAGAAC
                      ____________________________________________________________
consensus             ACAGTGTCTTGGCAATTGAACCTCCTACAAAAGGCAGATATCTTCAATCAAATAGAGAAC
 
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JMFF045F01+           CCAGTTCAAAAATATGAATTACAGACCAGATTGCTTGCACTAGGAAATAAGTAATTTAGG
                      ____________________________________________________________
consensus             CCAGTTCAAAAATATGAATTACAGACCAGATTGCTTGCACTAGGAAATAAGTAATTTAGG
 
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JMFF045F01+           ATTTCTTCAAGAAAAAAAAAAAAAACAAACTCGTGTATAGAATTGAAGCTTTATATTCTG
                      ____________________________________________________________
consensus             ATTTCTTCAAGAAAAAAAAAAAAAACAAACTCGTGTATAGAATTGAAGCTTTATATTCTG
 
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JMFF045F01+           CTTCATTGGCATTACTATGAAGGGTTGCCAAGAGAGAGAGACAGAGAAAGAGAAAGAGAG
                      ____________________________________________________________
consensus             CTTCATTGGCATTACTATGAAGGGTTGCCAAGAGAGAGAGACAGAGAAAGAGAAAGAGAG
 
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JMFF045F01+           ATTACTTCCTGCACCCGGAACAATAGGGCGAAAGTTAATTTTATTTGCTTCCAGCATCTG
JMSF027H13+                   CTGCACCCGGAACAATAGGGCGAAAGTTAATTTTATTTGCTTCCAGCATCTG
                      ____________________________________________________________
consensus             ATTACTTCCTGCACCCGGAACAATAGGGCGAAAGTTAATTTTATTTGCTTCCAGCATCTG
 
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JMFF045F01+           GGGTACCTCTCTTCCTGATTCTGATGCTTTCATGAAGAGTTGTTCAATATCTTTCATGCT
JMSF027H13+           GGGTACCTCTCTTCCTGATTCTGATGCTTTCATGAAGAGTTGTTCAATATCTTTCATGCT
                      ____________________________________________________________
consensus             GGGTACCTCTCTTCCTGATTCTGATGCTTTCATGAAGAGTTGTTCAATATCTTTCATGCT
 
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JMFF045F01+           AGAAAAGAAGTCCTTAGGCGCAACCTTATTTTCAACATCGTATTCTTTTACCGGGGTCTT
JMSF027H13+           AGAAAAGAAGTCCTTAGGCGCAACCTTATTTTCAACATCGTATTCTTTTACCGGGGTCTT
                      ____________________________________________________________
consensus             AGAAAAGAAGTCCTTAGGCGCAACCTTATTTTCAACATCGTATTCTTTTACCGGGGTCTT
 
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JMFF045F01+           TACATCATGCCCAACAGCAACTCCTCCTGACAGCTCAGGTCTTAATAGTGA         
JMSF027H13+           TACATCATGCCCAACAGCAACTCCTCCTGACAGCTCAGGTCTTAATGGTGACAAATTAGG
                      ____________________________________________________________
consensus             TACATCATGCCCAACAGCAACTCCTCCTGACAGCTCAGGTCTTAATGGTGACAAATTAGG
 
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JMSF027H13+           GGAATTCCTTTTCTCCCCATTCTTAAGCTTCATTTCTGATGTTACAGCTTCATCAGCACT
                      ____________________________________________________________
consensus             GGAATTCCTTTTCTCCCCATTCTTAAGCTTCATTTCTGATGTTACAGCTTCATCAGCACT
 
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JMSF027H13+           CATAGCAGGATCTTTTGTCCTGTTGTTAACATTAACAAACCTTTGAACCAGTGTTTCTGC
                      ____________________________________________________________
consensus             CATAGCAGGATCTTTTGTCCTGTTGTTAACATTAACAAACCTTTGAACCAGTGTTTCTGC
 
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JMSF027H13+           AGATGGATCATCAAACTCATCATCAGACTCCTGCAACGATGAATCTCTTCCAGGAGAGGA
                      ____________________________________________________________
consensus             AGATGGATCATCAAACTCATCATCAGACTCCTGCAACGATGAATCTCTTCCAGGAGAGGA
 
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JMSF027H13+           GTTGTTGCGTCCCTCATCTTCTGATAGAGGAACTCCATCGTCCTCCTTATAGTGCCTAGT
                      ____________________________________________________________
consensus             GTTGTTGCGTCCCTCATCTTCTGATAGAGGAACTCCATCGTCCTCCTTATAGTGCCTAGT
 
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JMSF027H13+           ATCAGCTCCATTCTCGGTCCTCCTTTCTTGCCCAAGACCAAAAAAATCCCAAGGCGGGGT
                      ____________________________________________________________
consensus             ATCAGCTCCATTCTCGGTCCTCCTTTCTTGCCCAAGACCAAAAAAATCCCAAGGCGGGGT
 
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JMSF027H13+           TTCATACGAGACAGGCGTATCAAACGGTGATGCTTCTTCATGCCTTCCGGGTGTGGAGTT
                      ____________________________________________________________
consensus             TTCATACGAGACAGGCGTATCAAACGGTGATGCTTCTTCATGCCTTCCGGGTGTGGAGTT
 
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JMSF027H13+           CTTCGGGGTGCCTGAAGTAACTGAGACCGTAACTGGAACAGCAGGTTTCTCTTCAACTTT
                      ____________________________________________________________
consensus             CTTCGGGGTGCCTGAAGTAACTGAGACCGTAACTGGAACAGCAGGTTTCTCTTCAACTTT