Contig 002272:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN041H16Sequence617002272 (3)ref|XP_009774752.1|232PREDICTED: uncharacterized protein LOC104224728 [Nicotiana sylvestris]
JMSF026O14Sequence629002272 (3)ref|XP_006344466.1|4e-58PREDICTED: uncharacterized protein LOC102580365 isoform X2 [Solanum tuberosum]576002272 (3)ref|XP_006344466.1|3e-58PREDICTED: uncharacterized protein LOC102580365 isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


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JMFN041H16+                                      TTTGCAGTGATGACAGTGGCGAAGCCCCTCGCC
                      ____________________________________________________________
consensus                                        TTTGCAGTGATGACAGTGGCGAAGCCCCTCGCC
 
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JMFN041H16+           GGCAACTGGATATCCAAAAACCGGTGAGGAGCATCTACTCGACGATGACGCCTTGTACTG
                      ____________________________________________________________
consensus             GGCAACTGGATATCCAAAAACCGGTGAGGAGCATCTACTCGACGATGACGCCTTGTACTG
 
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JMFN041H16+           CGGAGGCGAGTGGTGTCCGGAGATTTTAACCGGAAACAATCTCGACGTCGCCGGAAAATC
                      ____________________________________________________________
consensus             CGGAGGCGAGTGGTGTCCGGAGATTTTAACCGGAAACAATCTCGACGTCGCCGGAAAATC
 
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JMFN041H16+           GAAACAGGACATTGGCGAGGACGGAGGAGAGACCTTTTTCAGCGGATTGATCGGGGAAAG
rJMSF026O14-                                         ACCTTTTTCAGCGGATTGATCGGGGAAAG
JMSF026O14+                                          ACCTTTTTCAGCGGATTGATCGGGGAAAG
                      ____________________________________________________________
consensus             GAAACAGGACATTGGCGAGGACGGAGGAGAGACCTTTTTCAGCGGATTGATCGGGGAAAG
 
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JMFN041H16+           CACGGCTCGGATCTTCATCTCCTGATTCGTGGCAGCCGAGACGCGATCGTACTCTTCAAT
rJMSF026O14-          CACGGCTCGGATCTTCATCTCCTGATTCGTGGCAGCCGAGACGCGATCGTACTCTTCAAT
JMSF026O14+           CACGGCTCGGATCTTCATCTCCTGATTCGTGGCAGCCGAGACGCGATCGTACTCTTCAAT
                      ____________________________________________________________
consensus             CACGGCTCGGATCTTCATCTCCTGATTCGTGGCAGCCGAGACGCGATCGTACTCTTCAAT
 
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JMFN041H16+           CACATTCGCGAGATCCTCATCGCTCCTGACCGAGACCAGAACATCCAAATCCTCAGACGG
rJMSF026O14-          CACATTCGCGAGATCCTCATCGCTCCTGACCGAGACCAGAACATCCAAATCCTCAGACGG
JMSF026O14+           CACATTCGCGAGATCCTCATCGCTCCTGACCGAGACCAGAACATCCAAATCCTCAGACGG
                      ____________________________________________________________
consensus             CACATTCGCGAGATCCTCATCGCTCCTGACCGAGACCAGAACATCCAAATCCTCAGACGG
 
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JMFN041H16+           AAGCTTACACCTCAAGCTCATAGATTCTCCGCACGATTCCCCAAACTTCACCATCAGCTC
rJMSF026O14-          AAGCTTACACCTCAAGCTCATAGATTCTCCGCACGATTCCCCAAACTTCACCATCAGCTC
JMSF026O14+           AAGCTTACACCTCAAGCTCATAGATTCTCCGCACGATTCCCCAAACTTCACCATCAGCTC
                      ____________________________________________________________
consensus             AAGCTTACACCTCAAGCTCATAGATTCTCCGCACGATTCCCCAAACTTCACCATCAGCTC
 
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JMFN041H16+           TGCATAATTGATGGAGCGATGAACCGAAAGCACGCGAGTGAAGCCGCCAATATAGCGAAG
rJMSF026O14-          TGCATAATTGATGGAGCGATGAACCGAAAGCACGCGAGTGAAGCCGCCAATATAGCGAAG
JMSF026O14+           TGCATAATTGATGGAGCGATGAACCGAAAGCACGCGAGTGAAGCCGCCAATATAGCGAAG
                      ____________________________________________________________
consensus             TGCATAATTGATGGAGCGATGAACCGAAAGCACGCGAGTGAAGCCGCCAATATAGCGAAG
 
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JMFN041H16+           CTTGCCGTCGGAACGACGAGGAATGATTCTGCCTCCATAACTGTAGAGAAACTTGATTGA
rJMSF026O14-          CTTGCCGTCGGAACGACGAGGAATGATTCTGCCTCCATAACTGTAGAGAAACTTGATTGA
JMSF026O14+           CTTGCCGTCGGAACGACGAGGAATGATTCTGCCTCCATAACTGTAGAGAAACTTGATTGA
                      ____________________________________________________________
consensus             CTTGCCGTCGGAACGACGAGGAATGATTCTGCCTCCATAACTGTAGAGAAACTTGATTGA
 
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JMFN041H16+           CTGCTTGAGGTCGTTGAGTTTGTCGCGATTGTTGATAGAATTCAATGTTTGAGTCATGAT
rJMSF026O14-          CTGCTTGAGGTCGTTGAGTTTGTCGCGATTGTTGATAGAATTCAATGTTTGAGTCATGAT
JMSF026O14+           CTGCTTGAGGTCGTTGAGTTTGTCGCGATTGTTGATAGAATTCAATGTTTGAGTCATGAT
                      ____________________________________________________________
consensus             CTGCTTGAGGTCGTTGAGTTTGTCGCGATTGTTGATAGAATTCAATGTTTGAGTCATGAT
 
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JMFN041H16+           TTGAACGCCTGAAAGGTATGGAAAGTATACGAAGATGCTGAAGA                
rJMSF026O14-          TTGAACGCCTGAAAGGTATGGAAAGTATACGAAGATGCTGAAGACTCGTAGGCACCTTCC
JMSF026O14+           TTGAACGCCTGAAAGGTATGGAAAGTATACGAAGATGCTGAAGACTCGTAGGCACCTTCC
                      ____________________________________________________________
consensus             TTGAACGCCTGAAAGGTATGGAAAGTATACGAAGATGCTGAAGACTCGTAGGCACCTTCC