Contig 002259:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021O04Sequence543002259 (4)ref|XP_006338440.1|3e-55PREDICTED: KH domain-containing protein At4g18375-like isoform X4 [Solanum tube651009774 (3)ref|XP_006338439.1|6e-07PREDICTED: KH domain-containing protein At4g18375-like isoform X3 [Solanum tube
JMFF042K21Sequence638002259 (4)ref|XP_011098647.1|1e-70PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109289009774 (3)
JMSF025M13Sequence642002259 (4)ref|XP_011098647.1|6e-61PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109736009774 (3)ref|XP_006338439.1|2e-38PREDICTED: KH domain-containing protein At4g18375-like isoform X3 [Solanum tube
JMSF036J22Sequence655002259 (4)ref|XP_011098647.1|3e-61PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109613021536

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF042K21+ CTGATCCGAGGGTACCAACAGCCTAGCAGTCACACG
                      ____________________________________________________________
consensus CTGATCCGAGGGTACCAACAGCCTAGCAGTCACACG
 
. : . : . : . : . : . :
JMFF042K21+ CGGAGCATCCTCAGAGTCCTCAATTACCATGTCATCACCAACAATTCTGTCATGGACCTT
JMSF036J22+ GCATCCTCAGAGTCCTCAATTACCATGTCATCACCAACAATTCTGTCATGGACCTT
JMSF025M13+ CTCAATTACCATGTCATCACCAACAATTCTGTCATGGACCTT
                      ____________________________________________________________
consensus CGGAGCATCCTCAGAGTCCTCAATTACCATGTCATCACCAACAATTCTGTCATGGACCTT
 
. : . : . : . : . : . :
JMFF042K21+ GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
JMSF036J22+ GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
JMFF021O04+ GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
JMSF025M13+ GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
                      ____________________________________________________________
consensus GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
 
. : . : . : . : . : . :
JMFF042K21+ CTCGCTTGAGCTGTAGATAGTGACAACCCGCTCATCACAATCACGAACCGTCTCACCAAT
JMSF036J22+ CTCGCTTGAGCTGTAGATAGTGACAACCCACTCATCACAATCACGAACCGTCTCACCAAT
JMFF021O04+ CTCGCTTGAGCTGTAGATAGTGACAACCCGCTCATCACAATCACGAACCGTCTCACCAAT
JMSF025M13+ CTCGCTTGAGCTGTAGATAGTGACAACCCGCTCATCACAATCACGAACCGTCTCACCAAT
                      ____________________________________________________________
consensus CTCGCTTGAGCTGTAGATAGTGACAACCCGCTCATCACAATCACGAACCGTCTCACCAAT
 
. : . : . : . : . : . :
JMFF042K21+ CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
JMSF036J22+ CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
JMFF021O04+ CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
JMSF025M13+ CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
                      ____________________________________________________________
consensus CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
 
. : . : . : . : . : . :
JMFF042K21+ TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
JMSF036J22+ TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
JMFF021O04+ TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
JMSF025M13+ TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
                      ____________________________________________________________
consensus TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
 
. : . : . : . : . : . :
JMFF042K21+ TGACAAATGGTCCTTACCACCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
JMSF036J22+ TGACAAATGGTCCTTACCATCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
JMFF021O04+ TGACAAATGGTCCTTACCACCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
JMSF025M13+ TGACAAATGGTCCTTACCACCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
                      ____________________________________________________________
consensus TGACAAATGGTCCTTACCACCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
 
. : . : . : . : . : . :
JMFF042K21+ TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
JMSF036J22+ TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
JMFF021O04+ TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
JMSF025M13+ TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
                      ____________________________________________________________
consensus TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
 
. : . : . : . : . : . :
JMFF042K21+ AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
JMSF036J22+ AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
JMFF021O04+ AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
JMSF025M13+ AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
                      ____________________________________________________________
consensus AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
 
. : . : . : . : . : . :
JMFF042K21+ AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
JMSF036J22+ AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
JMFF021O04+ AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
JMSF025M13+ AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
                      ____________________________________________________________
consensus AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
 
. : . : . : . : . : . :
JMFF042K21+ GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
JMSF036J22+ GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
JMFF021O04+ GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
JMSF025M13+ GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
                      ____________________________________________________________
consensus GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
 
. : . : . : . : . : . :
JMSF036J22+ TGCGCGACCCGTACGACGACTTGACGATGATGTATGAGTTTGACCGGCCAAATC
JMSF025M13+ TGCGCGACCCGTACGACGACTTGACGATGATGTATGAGTTTGACCGGCCAAATCTTCTTC
                      ____________________________________________________________
consensus TGCGCGACCCGTACGACGACTTGACGATGATGTATGAGTTTGACCGGCCAAATCTTCTTC