Contig 002255:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025H06Sequence668002255 (2)716009981 (2)ref|XP_009624259.1|132PREDICTED: uncharacterized protein LOC104115353 [Nicotiana tomentosiformis]
JMSF047I13Sequence698002255 (2)ref|XP_009795780.1|205PREDICTED: uncharacterized protein LOC104242429 [Nicotiana sylvestris]743009981 (2)ref|XP_009624259.1|178PREDICTED: uncharacterized protein LOC104115353 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF047I13+                                       CAGAAATTCTAAACGTAAATTTACTCATGGCA
                      ____________________________________________________________
consensus                                         CAGAAATTCTAAACGTAAATTTACTCATGGCA
 
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JMSF047I13+           GGACCAGGTGAATTTACCCTAAAGACAAGAGCACCATCAACATGCCCACAAAAGGGTCCG
                      ____________________________________________________________
consensus             GGACCAGGTGAATTTACCCTAAAGACAAGAGCACCATCAACATGCCCACAAAAGGGTCCG
 
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JMSF047I13+           TTGCTAACGAGGGACAGAATGTCTTGGAGCTTCAATGGAGGGCAGAGAACATCAATAAGA
                      ____________________________________________________________
consensus             TTGCTAACGAGGGACAGAATGTCTTGGAGCTTCAATGGAGGGCAGAGAACATCAATAAGA
 
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JMSF047I13+           TACTGTGCAGATTGCGAAATCTTGTGGTTCAGCTTAGGAAGTTCCACATGGTACCAACAA
                      ____________________________________________________________
consensus             TACTGTGCAGATTGCGAAATCTTGTGGTTCAGCTTAGGAAGTTCCACATGGTACCAACAA
 
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JMSF047I13+           AACTCTTTCCCTCTACCCTCTGACAAATCCCATTCCTTGTTGAAGTAGCCCCCTTCTCCA
                      ____________________________________________________________
consensus             AACTCTTTCCCTCTACCCTCTGACAAATCCCATTCCTTGTTGAAGTAGCCCCCTTCTCCA
 
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JMSF047I13+           TCAAAAATATATGCTTTCACTCTCACAGCCCCCGAACAACGCACCAGAAAATCATTATTC
                      ____________________________________________________________
consensus             TCAAAAATATATGCTTTCACTCTCACAGCCCCCGAACAACGCACCAGAAAATCATTATTC
 
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JMSF047I13+           TCCCCAATATTAGTATGTGTTAGTGGCATTGTTTCCATTTCCTCTTCTACTTCTCCCCCT
JMSF025H06+                                                               CTCCCCCT
                      ____________________________________________________________
consensus             TCCCCAATATTAGTATGTGTTAGTGGCATTGTTTCCATTTCCTCTTCTACTTCTCCCCCT
 
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JMSF047I13+           CTCTCTCTGTTCATCCTCTCATGAATAAGTTCCATGTTCATAAAAACTTTCACTCATCAG
JMSF025H06+           CTCTCTCTGTTCATCCTCTCATGAATAAGTTCCATGTTCATAAAAACTTTCACTCATCAG
                      ____________________________________________________________
consensus             CTCTCTCTGTTCATCCTCTCATGAATAAGTTCCATGTTCATAAAAACTTTCACTCATCAG
 
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JMSF047I13+           CTAAAGTAAAAAAGAATAAGAAACCCCGATACAAGCAAGCTCTTTTGTTCAACAATCGCT
JMSF025H06+           CTAAAGTAAAAAAGAATAAGAAACCCCGATACAAGCAAGCTCTTTTGTTCAACAATCGCT
                      ____________________________________________________________
consensus             CTAAAGTAAAAAAGAATAAGAAACCCCGATACAAGCAAGCTCTTTTGTTCAACAATCGCT
 
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JMSF047I13+           CGAAGTTC                                                    
JMSF025H06+           CGAAGTTCTAGAAGAACAACAATTCAGTTTAGAAAGGATGAAGCACACGCCAATAACCTC
                      ____________________________________________________________
consensus             CGAAGTTCTAGAAGAACAACAATTCAGTTTAGAAAGGATGAAGCACACGCCAATAACCTC
 
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JMSF025H06+           CGCCTAATCAGCGCAATTATAACAGAATTCAATGAACACTGGATATAAATGAAATCAAAA
                      ____________________________________________________________
consensus             CGCCTAATCAGCGCAATTATAACAGAATTCAATGAACACTGGATATAAATGAAATCAAAA
 
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JMSF025H06+           GAAATGAAAATCTCGAGTAATCTGAAATCTGCAACAAATTCATGAACACCAGATTACCCG
                      ____________________________________________________________
consensus             GAAATGAAAATCTCGAGTAATCTGAAATCTGCAACAAATTCATGAACACCAGATTACCCG
 
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JMSF025H06+           ATAGTCATGCACCAACTTCGCATCATATCTATTCTCACCAATTAAGCAGGGGTTTTACCT
                      ____________________________________________________________
consensus             ATAGTCATGCACCAACTTCGCATCATATCTATTCTCACCAATTAAGCAGGGGTTTTACCT
 
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JMSF025H06+           CGTTCAAACAGCTCAAAGAAACTGCAAGCAACTCCGGTATAAATCCAATCATGAAAATCC
                      ____________________________________________________________
consensus             CGTTCAAACAGCTCAAAGAAACTGCAAGCAACTCCGGTATAAATCCAATCATGAAAATCC
 
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JMSF025H06+           CTACAAAACCAACCAAAAACCACCCAAATACAAATGGTTCTATGTAAGCCGCCGAATGAA
                      ____________________________________________________________
consensus             CTACAAAACCAACCAAAAACCACCCAAATACAAATGGTTCTATGTAAGCCGCCGAATGAA
 
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JMSF025H06+           GAAAAGCGAACGAAACTTTAGGAAAGAAACTGTGTATGATTTTCTCTGCGTGTACTCAAA
                      ____________________________________________________________
consensus             GAAAAGCGAACGAAACTTTAGGAAAGAAACTGTGTATGATTTTCTCTGCGTGTACTCAAA
 
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JMSF025H06+           GTCAACTCACAAATGCGATCATGGAAACGAATGAAGAAGTCGGAAATCGGAAAGAAGACC
                      ____________________________________________________________
consensus             GTCAACTCACAAATGCGATCATGGAAACGAATGAAGAAGTCGGAAATCGGAAAGAAGACC
 
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JMSF025H06+           TGCTCTATCTAGAATTCTGACCAAAGAATGAAACTTTCCTCTAAACCACCGTCACCTCCC
                      ____________________________________________________________
consensus             TGCTCTATCTAGAATTCTGACCAAAGAATGAAACTTTCCTCTAAACCACCGTCACCTCCC