Contig 002254:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF025G17+                                                              TTCAATAAG
                      ____________________________________________________________
consensus                                                                TTCAATAAG
 
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JMSF025G17+           CAGCCTCGCAGGGTAGAAAGTTGCTGTGAGAAATATGCCATTGCTATTGCTGCTTTATCA
                      ____________________________________________________________
consensus             CAGCCTCGCAGGGTAGAAAGTTGCTGTGAGAAATATGCCATTGCTATTGCTGCTTTATCA
 
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JMSF025G17+           TCAAAACCATACACCTTTGGGAAGTATTGCTCAATTTTTTTGATGAGACTAGTTAAAGCA
                      ____________________________________________________________
consensus             TCAAAACCATACACCTTTGGGAAGTATTGCTCAATTTTTTTGATGAGACTAGTTAAAGCA
 
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JMSF025G17+           ACACTACACATTTTTGATGAGTACAACAGGTCTGTTGCATATTTTGCAGCTTCTTTCAAA
                      ____________________________________________________________
consensus             ACACTACACATTTTTGATGAGTACAACAGGTCTGTTGCATATTTTGCAGCTTCTTTCAAA
 
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JMFS119E02+                                                               GAAGGATG
JMSF025G17+           GTTTGATGGAGGAGGAGTTGATGGGAAGCTGCAGCTTTTTCTCCGTGTTGATGAAGGATG
                      ____________________________________________________________
consensus             GTTTGATGGAGGAGGAGTTGATGGGAAGCTGCAGCTTTTTCTCCGTGTTGATGAAGGATG
 
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JMFS119E02+           AAGTTGCTAAGGTGTAGTTCAATATCATCTTCAGCTTTGAGTGCAAAGTCTCTGATTTCC
JMSF025G17+           AAGTTGCTAAGGTGTAGTTCAATGTCGTCTTCAGCTTTGAGTGCAAACTCTCTGATTTCC
                      ____________________________________________________________
consensus             AAGTTGCTAAGGTGTAGTTCAATGTCGTCTTCAGCTTTGAGTGCAAAGTCTCTGATTTCC
 
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JMFS119E02+           ATTTCTAAATCTCTCACTTTCACTGCATAACCATCACCATCACCACTGGATTCCTTCTGG
JMSF025G17+           ACTTCTAAATCTCTGACTTTGAGTACT---GCATCACCATCACCACTGGATTCCATCTGG
                      ____________________________________________________________
consensus             ATTTCTAAATCTCTGACTTTGAGTGCTTAAGCATCACCATCACCACTGGATTCCTTCTGG
 
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JMFS119E02+           AGAAGGGCTTGCAAAGCATAAAGTTTTTCAAGGAAAGACTTGATTCCTGCTCGATCATGA
JMSF025G17+           AGAAGGGCTTGCAAATAAGAAAGGTTTTCAAGGAAAGCGTTGATTCCTGCTCGATCATGA
                      ____________________________________________________________
consensus             AGAAGGGCTTGCAAATCATAAAGTTTTTCAAGGAAAGCGTTGATTCCTGCTCGATCATGA
 
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JMFS119E02+           TCATGGAGATACAGGCTTACCCTTTCTGTTTGCCCAACGACAAACTCAATCTCAATGGTT
JMSF025G17+           TCATGGAGAGACAGGCTTACCCTTGCTGTTTTCCGA---AGAAACTCAATCTCAATGGTT
                      ____________________________________________________________
consensus             TCATGGAGATACAGGCTTACCCTTTCTGTTTTCCGAACGAGAAACTCAATCTCAATGGTT
 
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JMFS119E02+           TTAATGAGAGAAGCTAAAGCAACACAAGCCATCTATCTCTCAATTCCAATCTTTAATTTA
JMSF025G17+           TTAATCAGAGAAGCTAAAGCAACACAAGCCATCTATCTCTCAATTCCAATCTTTAATTTA
                      ____________________________________________________________
consensus             TTAATGAGAGAAGCTAAAGCAACACAAGCCATCTATCTCTCAATTCCAATCTTTAATTTA
 
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JMFS119E02+           ATTTGCTGGATGGTAAGAATATGTATGTAGTTTTAAGTTTTGGTATTGCACACTG-ATAA
JMSF025G17+           ACTTGCTGGATGGTAAGAATATGTATGTAGTTTTAAGTTTTGGTATTGCACACTGAAAAA
                      ____________________________________________________________
consensus             ATTTGCTGGATGGTAAGAATATGTATGTAGTTTTAAGTTTTGGTATTGCACACTGAATAA
 
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JMFS119E02+           CTAGATCAATCAAATATGCAAGCAA                                   
JMSF025G17+           CTAGATCGATCAAATATGCAAGCAAGACTCTGATCTGAGAAGAGCTTAAATTAGCTTATC
                      ____________________________________________________________
consensus             CTAGATCGATCAAATATGCAAGCAAGACTCTGATCTGAGAAGAGCTTAAATTAGCTTATC