Contig 002253:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025E20Sequence684002253 (2)ref|XP_009760016.1|3e-37PREDICTED: CDP-diacylglycerol--serine O-phosphatidyltransferase 1-like [Nicotia784001372 (2)gb|AHM22937.1|4e-125phosphatidylserine synthase 2 [Nicotiana tabacum]
JMSF025M21Sequence627002253 (2)gb|EYU30026.1|2e-25hypothetical protein MIMGU_mgv1a006930mg [Erythranthe guttata]727001372 (2)ref|XP_009779790.1|1e-110PREDICTED: CDP-diacylglycerol--serine O-phosphatidyltransferase 1-like isoform

Alignment

This contig is upended


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JMSF025E20+                                               TGTAGTAAAGAGTAAGCAAGATAG
                      ____________________________________________________________
consensus                                                 TGTAGTAAAGAGTAAGCAAGATAG
 
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JMSF025M21+                                            GTTGCAACCAGATCATCAANTGAGGTA
JMSF025E20+           ACTGCAATCATTGCCCAGACACCCCTTTTCACAGTTGCAACCAGATCATCAACTGAGGTA
                      ____________________________________________________________
consensus             ACTGCAATCATTGCCCAGACACCCCTTTTCACAGTTGCAACCAGATCATCAACTGAGGTA
 
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JMSF025M21+           CGTTCAGGATCAAGAGCTCCACTTGCCCAAATGAGAAAACATGCACCAATAAACAACAAT
JMSF025E20+           CGTTCAGGATCAAGAGCTCCACTTGCCCAAATGAGAAAACATGCACCAATAAACAACAAT
                      ____________________________________________________________
consensus             CGTTCAGGATCAAGAGCTCCACTTGCCCAAATGAGAAAACATGCACCAATAAACAACAAT
 
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JMSF025M21+           GTAACTGTGCGGGGTTTGTATAGCCAAGCAGTCCATGGATCCAGCTCATCAACAGAACTT
JMSF025E20+           GTAACTGTGCGGGGTTTGTATAGCCAAGCAGTCCATGGATCCAGCTCATCAACAGAACTT
                      ____________________________________________________________
consensus             GTAACTGTGCGGGGTTTGTATAGCCAAGCAGTCCATGGATCCAGCTCATCAACAGAACTT
 
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JMSF025M21+           GTTGAGTTCACCTCACCATTTTGCATAGAAACAAGATTCTTTTTGTTACCCCGTCTATGG
JMSF025E20+           GTTGAGTTCACCTCACCATTTTGCATAGAAACAAGATTCTTTTTGTTACCCCGTCTATGG
                      ____________________________________________________________
consensus             GTTGAGTTCACCTCACCATTTTGCATAGAAACAAGATTCTTTTTGTTACCCCGTCTATGG
 
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JMSF025M21+           CCATTAGACTCCATAAGCCTAGTCTTCCAAAATTCTGATTCTTGCGTTTATAAAGCTGAC
JMSF025E20+           CCATTAGACTCCATAAGCCTAGTCTTCCAAAATTCTGATTCTTGCGTTTATAAAGCTGAC
                      ____________________________________________________________
consensus             CCATTAGACTCCATAAGCCTAGTCTTCCAAAATTCTGATTCTTGCGTTTATAAAGCTGAC
 
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JMSF025M21+           AGCCTCACAGCCGAGGCCTAGCCGTCCGATTGGTAATAGTGGTGATCGTGGCCGTCGGAT
JMSF025E20+           AGCCTCACAGCCGAGGCCTAGCCGTCCGATTGGTAATAGTGGTGATCGTGGCCGTCGGAT
                      ____________________________________________________________
consensus             AGCCTCACAGCCGAGGCCTAGCCGTCCGATTGGTAATAGTGGTGATCGTGGCCGTCGGAT
 
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JMSF025M21+           CAGACTGGCAGGCAGAGTCGTGGAGATTGAGAAACGGCTATTATGGCCACCGCCGCCGCC
JMSF025E20+           CAGACTGGCAGGCAGAGTCGTGGAGATTGAGAAACGGCTATTATGGCCACCGCCGCCGCC
                      ____________________________________________________________
consensus             CAGACTGGCAGGCAGAGTCGTGGAGATTGAGAAACGGCTATTATGGCCACCGCCGCCGCC
 
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JMSF025M21+           GCCGCCGCCGTCAACCGTATTTGAGTGAGCAGTAACTAGTTGAGATGTGAAAGAGGAAGA
JMSF025E20+           GCCGCCGCCGTCAACCGTATTTGAGTGAGCAGTAACTAGTTGAGATGTGAAAGAGGAAGA
                      ____________________________________________________________
consensus             GCCGCCGCCGTCAACCGTATTTGAGTGAGCAGTAACTAGTTGAGATGTGAAAGAGGAAGA
 
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JMSF025M21+           AGAAGCAGACAACTAGAGCTCTTTCTCTTCTCTAGTATAGGAGGATACGTACACCCCTGC
JMSF025E20+           AGAAGCAGACAACTAGAGCTCTTTCTCTTCTCTAGTATAGGAGGATACGTACACCCCTGC
                      ____________________________________________________________
consensus             AGAAGCAGACAACTAGAGCTCTTTCTCTTCTCTAGTATAGGAGGATACGTACACCCCTGC
 
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JMSF025M21+           GTGTATGTATAGGTCGGGGGAGAAAGAAAGAGAGTCGTCACTGCTCTTCTGTAGAAGTTC
JMSF025E20+           GTGTATGTATAGGTCGGGGGAGAAAGAAAGAGAGTCGTCACTGCTCTTCTGTAGAAGTTC
                      ____________________________________________________________
consensus             GTGTATGTATAGGTCGGGGGAGAAAGAAAGAGAGTCGTCACTGCTCTTCTGTAGAAGTTC
 
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JMSF025M21+           GCACTTCGCAGCGGCGAAGAGAGAGAAAGAGAGAGAGTGTGTGTGTGTGGGTGTACGAGC
JMSF025E20+           GCACTTCGCAGCGGCGAAGAGAGAGAAAGAGAGAGAGTGTGTGTGTGTGGGTGTACGAGC
                      ____________________________________________________________
consensus             GCACTTCGCAGCGGCGAAGAGAGAGAAAGAGAGAGAGTGTGTGTGTGTGGGTGTACGAGC