Contig 002252:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025E10Sequence404002252 (3)728020397ref|XP_006353466.1|6e-33PREDICTED: protein tesmin/TSO1-like CXC 5-like [Solanum tuberosum]
JMSF033J23Sequence409002252 (3)701007183 (2)ref|XP_006353466.1|6e-47PREDICTED: protein tesmin/TSO1-like CXC 5-like [Solanum tuberosum]
JMSF037H14Sequence342002252 (3)634007183 (2)ref|XP_006353466.1|2e-34PREDICTED: protein tesmin/TSO1-like CXC 5-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033J23+ GNTGNGNCCTNTTTGGNGGGNAATCCCCTCCCTCNCTTTTNTCCNTTCAAAA
                      ____________________________________________________________
consensus GNTGNGNCCTNTTTGGNGGGNAATCCCCTCCCTCNCTTTTNTCCNTTCAAAA
 
. : . : . : . : . : . :
JMSF033J23+ CNATAATAATTNGCCGCCGNAAAAAAAAATAAAAATACNCNGNTTAAATTAAATAACNCT
JMSF037H14+ AAAAAAAAATAAAAATNCCCNGNTTAAATTAAATAACCCT
JMSF025E10+ AAAAAAAAATAAAAATACNCNGNTTAAATTAAATAACNCT
                      ____________________________________________________________
consensus CNATAATAATTNGCCGCCGNAAAAAAAAATAAAAATACCCNGNTTAAATTAAATAACCCT
 
. : . : . : . : . : . :
JMSF033J23+ TCACAGNTTCCCCACTCCGAAACTCCCAGAAATTCAAATTCCCAATTCCAAAACNGTATT
JMSF037H14+ TCNCNGNTTCCCCNCTCCGAAACTCCCNGAAATTCAAATTCCCAATTCCAAAACNGTATT
JMSF025E10+ TCACAGATTCCCCNCTCCGAAACTCCCNGAAATTCAAATTCCCAATTCCAAAACNGTATT
                      ____________________________________________________________
consensus TCACAGATTCCCCACTCCGAAACTCCCAGAAATTCAAATTCCCAATTCCAAAACNGTATT
 
. : . : . : . : . : . :
JMSF033J23+ TGGAAATTTCAAATTCGATATCGAAACAGNGTCATCACTCATCACGCAGNTCAGATTCAA
JMSF037H14+ TGGAAATTTCAAATTCGATATNGAAACAGNGTCATCNCTCATCNCGCAGNTCAGNTTCAA
JMSF025E10+ TGGAAATTTCAAATTCGATATNGAAACAGTGTCATCACTCATCACGCAGNTCAGATTCAA
                      ____________________________________________________________
consensus TGGAAATTTCAAATTCGATATCGAAACAGTGTCATCACTCATCACGCAGNTCAGATTCAA
 
. : . : . : . : . : . :
JMSF033J23+ AGGNG-AAAAAAAAAATCCTCCGAATGTCGGCTTCAAAATCTTCAGTTTATCGACCTCAA
JMSF037H14+ AGGGGAAAAAAAAAAATCCTCCGAATGTCGGCTTCAAAATCTTCAGTTTATCGACCTCAA
JMSF025E10+ AGGNG-AAAAAAAAAATCCTCCGAATGTCGGCTTCAAAATCTTCAGTTTATCGACCTCAA
                      ____________________________________________________________
consensus AGGGG-AAAAAAAAAATCCTCCGAATGTCGGCTTCAAAATCTTCAGTTTATCGACCTCAA
 
. : . : . : . : . : . :
JMSF033J23+ TCTACTGAAAAATCGATCTATATAGCACACAAATACCCGCGCAAATCCTTGTATGCGTGT
JMSF037H14+ TCTACTGAAAAATCGATCTATATAGCACACAAATACCCGCGCAAATCCTTGTATGCGTGT
JMSF025E10+ TCTACTGAAAAATCGATCTATATAGCACACAAATACCCGCGCAAATCCTTGTATGCGTGT
                      ____________________________________________________________
consensus TCTACTGAAAAATCGATCTATATAGCACACAAATACCCGCGCAAATCCTTGTATGCGTGT
 
. : . : . : . : . : . :
JMSF033J23+ GTATGTATATGCGGAGAGAGAAAATGAGGGATTTTCTGAAGAAGAGCAAGTAGGCTT
JMSF037H14+ GTATGTATATGCGGAGAGAGAAAATGAGGGATTTTCTGAAGAAGAGCAAGTAGGCTT
JMSF025E10+ GTATGTATATGCGGAGAGAGAAAATGAGGGATTTTCTGAAGAAGAGCAAGTAGGCTTGTC
                      ____________________________________________________________
consensus GTATGTATATGCGGAGAGAGAAAATGAGGGATTTTCTGAAGAAGAGCAAGTAGGCTTGTC