Contig 002249:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023P05Sequence628002249 (5)ref|XP_009621089.1|1e-79PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen749002249 (5)ref|XP_009621089.1|2e-92PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen
JMSF024O03Sequence693002249 (5)ref|XP_009621089.1|3e-78PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen701002249 (5)ref|XP_009621089.1|7e-86PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen
JMSF049D10Sequence673002249 (5)ref|XP_009621089.1|2e-75PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen750021597ref|XP_009621089.1|1e-37PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-                                               ATCTCACTAACAAGAATAAACAA
rJMSF023P05-                          TTATATTGTTGCATGATTACAATCTCACTAACAAGAATAAACAA
                      ____________________________________________________________
consensus                             TTATATTGTTGCATGATTACAATCTCACTAACAAGAATAAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          TATAATGTAATAGAAACAAATTCGATCACCGTAGTACGTTGCTGTAGAGGAAGAAGCAAG
rJMSF023P05-          TATAATGTAATAGAAACAAATTCGATCACCGTAGTACGTTGCTGTAGAGGAAGAAGCAAG
                      ____________________________________________________________
consensus             TATAATGTAATAGAAACAAATTCGATCACCGTAGTACGTTGCTGTAGAGGAAGAAGCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          AGGTAGTACTGCTAGCTAGCTAGTCATGGTGATTTGCTAATATATAGCAGAAGAAGAGGT
rJMSF023P05-          AGGTAGTACTGCTAGCTAGCTAGTCATGGTGATTTGCTAATATATAGCAGAAGAAGAGGT
                      ____________________________________________________________
consensus             AGGTAGTACTGCTAGCTAGCTAGTCATGGTGATTTGCTAATATATAGCAGAAGAAGAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          ACAATAATATAGGTGTAATGTGATATTTGCAGAGTGAATGATGAAGATTGATCGTAAAAT
rJMSF023P05-          ACAATAATATAGGTGTAATGTGATATTTGCAGAGTGAATGATGAAGATTGATCGTAAAAT
                      ____________________________________________________________
consensus             ACAATAATATAGGTGTAATGTGATATTTGCAGAGTGAATGATGAAGATTGATCGTAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          TCTGAGGAGTCAACCGCAAGAGGCATACCGTCGCTGTTGAGGGTGCACGACAAGGGATCA
rJMSF023P05-          TCTGAGGAGTCAACCGCAAGAGGCATACCGTCGCTGTTGAGGGTGCACGACAAGGGATCA
                      ____________________________________________________________
consensus             TCTGAGGAGTCAACCGCAAGAGGCATACCGTCGCTGTTGAGGGTGCACGACAAGGGATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          GAGCCGTTGGTGCTCATCATCAGCGCCCTCAGAACTGCAGAGACTGTGTGAATATAACGA
rJMSF023P05-          GAGCCGTTGGTGCTCATCATCAGCGCCCTCAGAACTGCAGAGACTGTGTGAATATAACGA
                      ____________________________________________________________
consensus             GAGCCGTTGGTGCTCATCATCAGCGCCCTCAGAACTGCAGAGACTGTGTGAATATAACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          GCTCGATTTTTGTTGAGAAGCCATGTTAGACCCATCAGCTGGCAATCTCTGCTGCGCATT
rJMSF023P05-          GCTCGATTTTTGTTGAGAAGCCATGTTAGACCCATCAGCTGGCAATCTCTGCTGCGCATT
                      ____________________________________________________________
consensus             GCTCGATTTTTGTTGAGAAGCCATGTTAGACCCATCAGCTGGCAATCTCTGCTGCGCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          TTGCTTCCTCTTTCGTCTGATTTGCTTGTGCTTCTCGTTTCAGACTTGCTAAGCAGATAC
rJMSF023P05-          TTGCTTCCTGTTTCGTCTGATTTGCTTGTGCTTCTCGTTTCAGACTTGCTAAGCAGATAC
                      ____________________________________________________________
consensus             TTGCTTCCTGTTTCGTCTGATTTGCTTGTGCTTCTCGTTTCAGACTTGCTAAGCAGATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          AAGCTATTCAAGCACTTGGAGCAACTGGCAAGGCTAGAATACCCATTTGCAGAAGAACTG
rJMSF023P05-          AAGCTATTCAAGCACTTGGAGCAACTGGCAAGGCTAGAATACCCATTTGCAGAAGAACTG
                      ____________________________________________________________
consensus             AAGCTATTCAAGCACTTGGAGCAACTGGCAAGGCTAGAATACCCATTTGCAGAAGAACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          AAGCAATCAGTTTCCAGTCTCTTCACACTCTGATGGCCCACCAATTCGCCATGGGAATTC
rJMSF023P05-          AAGCAATCAGTTTCCAGTCTCTTCACACTCTGATGGCCCACCAATTCGCCATGGGAATTC
JMSF049D10+                                                          GCCATGGGAATTC
JMSF023P05+                                       TCTGATGGCCCACCAATTCGCCATGGGAATTC
JMSF024O03+                                       TCTGATGGCCCACCANTTCGCCATGGGAATTC
                      ____________________________________________________________
consensus             AAGCAATCAGTTTCCAGTCTCTTCACACTCTGATGGCCCACCAATTCGCCATGGGAATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          ATGGAGAAAGCTTCCGGGCAGCTCAAAGGGTGAAGCCTAATGCCACAGTAGCAGTAAACT
rJMSF023P05-          ATGGAGAAAGCTTCCGGGCAGCTCAAAGGGTGAAGCCTAATGCCACAGTAGCAGTAAACT
JMSF049D10+           ATGGAGAAAGCTTCCGGGCAGCTCAAAGGGTGAAGCCTAATGCCACAGTAGCAGTAAACT
JMSF023P05+           ATGGAGAAAGCTTCCGGGCAGCTCAAAGGGTGAAGCCTAATGCCACAGTAGCAGTAAACT
JMSF024O03+           ATGGAGAAAGCTTCCGGGCAGCTCAAAGGGTGAAGCCTAATGCCACAGTAGCAGTAAACT
                      ____________________________________________________________
consensus             ATGGAGAAAGCTTCCGGGCAGCTCAAAGGGTGAAGCCTAATGCCACAGTAGCAGTAAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          ACGTCACAGGTCTGGTTGGGCTTCACCAATTCAATGCCTTTATTCCCCAGAGCCTTCTCC
rJMSF023P05-          ACGTCACAGGTCTGGTTGGGCTTCACCAATTCAATGCCTTTATTCCCCAGAGCCTTCTCC
JMSF049D10+           ACGTCACAGGTCTGGTTGGGCTTCACCAATTCAATGCCTTTATTCCCCAGAGCCTTCTCC
JMSF023P05+           ACGTCACAGGTCTGGTTGGGCTTCACCAATTCAATGCCTTTATTCCCCAGAGCCTTCTCC
JMSF024O03+           ACGTCACAGGTCTGGTTGGGCTTCACCAATTCAATGCCTTTATTCCCCAGAGCCTTCTCC
                      ____________________________________________________________
consensus             ACGTCACAGGTCTGGTTGGGCTTCACCAATTCAATGCCTTTATTCCCCAGAGCCTTCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024O03-          AGAGAATCCACGCAGG                                            
rJMSF023P05-          AGAGAATCCACGCAGGTCTCGGAGTCATCCGGGAGCACCGGCATG               
JMSF049D10+           AGAGAATCCACGCAGGTCTCGGAGTCATCCGGGAGCACCGGCATGTCAAACGTCGTCGTT
JMSF023P05+           AGAGAATCCACGCAGGTCTCGGAGTCATCCGGGAGCACCGGCATGTCAAACGTCGTCGTT
JMSF024O03+           AGAGAATCCACGCAGGTCTCGGAGTCATCCGGGAGCACCGGCATGTCAAACGTCGTCGTT
                      ____________________________________________________________
consensus             AGAGAATCCACGCAGGTCTCGGAGTCATCCGGGAGCACCGGCATGTCAAACGTCGTCGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049D10+           CGAGGGATCTTGGAGGTGGCCCTTTGGAGGGCAGTTGTTGAATAGGCGGAGTAGAGCCAG
JMSF023P05+           CGAGGGATCTTGGAGGTGGCCCTTTGGAGGGCAGTTGTTGAATAGGCGGAGTAGAGCCAG
JMSF024O03+           CGAGGGATCTTGGAGGTGGCCCTTTGGAGGGCAGTTGTTGAATAGGCGGAGTAGAGCCAG
                      ____________________________________________________________
consensus             CGAGGGATCTTGGAGGTGGCCCTTTGGAGGGCAGTTGTTGAATAGGCGGAGTAGAGCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049D10+           GCCGCGAGTACCGGGCAGCACCGGGTCCGGTGGAGAGGACCCGAATAATCATTCGACCCG
JMSF023P05+           GCCGCGAGTACCGGGCAGCACCGGGTCCGGTGGAGAGGACCCGAATAATCATTCGACCCG
JMSF024O03+           GCCGCGAGTACCGGGCAGCACCGGGTCCGGTGGAGAGGACCCGAATAATCATTCGACCCG
                      ____________________________________________________________
consensus             GCCGCGAGTACCGGGCAGCACCGGGTCCGGTGGAGAGGACCCGAATAATCATTCGACCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049D10+           CAGGCGGATTTGATCCCGCGGAAGAGCTCCTCCGTGAGGTCCAGCGGGCAGGCGGCGGTG
JMSF023P05+           CAGGCGGATTTGATCCCGCGGAAGAGCTCCTCCGTGAGGTCCAGCGGGCAGGCGGCGGTG
JMSF024O03+           CAGGCGGATTTGATCCCGCGGAAGAGCTCCTCCGTGAGGTCCAGCGGGCAGGCGGCGGTG
                      ____________________________________________________________
consensus             CAGGCGGATTTGATCCCGCGGAAGAGCTCCTCCGTGAGGTCCAGCGGGCAGGCGGCGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049D10+           TTGGACTGCTCCGGGAACGCCGGAATCGTTGCGGACGTTGATGGGGTGGAAAATGAAACG
JMSF023P05+           TTGGACTGCTCCGGGAACGCCGGAATCGTTGCGGGCGTTGATGGGGTGGAAAATGAAACG
JMSF024O03+           TTGGACTGCTCCGGGAACGCCGGAATCGTTGCGGGCGTTGATGGGGTGGAAAATGAAACG
                      ____________________________________________________________
consensus             TTGGACTGCTCCGGGAACGCCGGAATCGTTGCGGGCGTTGATGGGGTGGAAAATGAAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049D10+           GGTTCTGGATCGGGCAAATCCGGATTGGCAATCGAAACCGGTATGCATAAGCTGGCAAGT
JMSF023P05+           GGTTCTGGATCGGGCAAATCCGGATTGGCAATCGAAACCGGTATGCATAAGCTGGCAAGT
JMSF024O03+           GGTTCTGGATCGGGCAAATCCGGATTGGCAATCGAAACCGGTATGCATAAGCTGGCAAGT
                      ____________________________________________________________
consensus             GGTTCTGGATCGGGCAAATCCGGATTGGCAATCGAAACCGGTATGCATAAGCTGGCAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049D10+           GAAAGGAAAGTGAAGGAGAGAAAGAAAACAGAGGAGTGGAACATTGCTTTGAGAGTGAGA
JMSF023P05+           GAAAGGAAAGTGAAGGAGAGAAAGAAAACAGAGGAGTGGAACATTGCTTTGAGAGTGAGA
JMSF024O03+           GAAAGGAAAGTGAAGGAGAGAAAGAAAACAGAGGAGTGGAACATTGCTTTGAGAGTGAGA
                      ____________________________________________________________
consensus             GAAAGGAAAGTGAAGGAGAGAAAGAAAACAGAGGAGTGGAACATTGCTTTGAGAGTGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049D10+           GAAGTGGGAATTAAGTTCTCTTTTCCAATTTGGCTAAGAGAAAAAGGAGAAATGGAGAGA
JMSF023P05+           GAAGTGGGAATTAAGTTCTCTTTTCCAATTTGGCTAAGAGAAAAAGGAGAAATGG     
JMSF024O03+           GAAGTGGGAATTAAGTTCTCTTTTCCAATTTGGCTAAGAGAAAAAGGAGAAATGGAGAGA
                      ____________________________________________________________
consensus             GAAGTGGGAATTAAGTTCTCTTTTCCAATTTGGCTAAGAGAAAAAGGAGAAATGGAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049D10+           AGTTGATAGTAAGTTGAGTTGGATATATGGCTTTAATGCATTGCTATTTGCCATTTG   
JMSF024O03+           AGTTGATAGTAAGTTGAGTTGGATATATGGCTTTAATGCATTGCTATTTGCCATTTGCTC
                      ____________________________________________________________
consensus             AGTTGATAGTAAGTTGAGTTGGATATATGGCTTTAATGCATTGCTATTTGCCATTTGCTC