Contig 002247:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS010B07Sequence553002247 (11)ref|XP_009785424.1|4e-21PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS033C10Sequence627002247 (11)ref|XP_009785424.1|8e-48PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS033E08Sequence613002247 (11)ref|XP_009785424.1|1e-40PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS038G07Sequence512002247 (11)ref|XP_009785424.1|7e-17PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS054A03Sequence578002247 (11)ref|XP_009785424.1|3e-21PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS082D01Sequence535002247 (11)ref|XP_009630570.1|1e-19PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana tomentosiformis
JMFS109C01Sequence579002247 (11)ref|XP_009785424.1|2e-41PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS128E07Sequence606002247 (11)ref|XP_009785424.1|3e-40PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS154C07Sequence633002247 (11)ref|XP_009785424.1|2e-47PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS154G10Sequence634002247 (11)ref|XP_009785424.1|5e-51PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMSF024M02Sequence302002247 (11)727018217ref|XP_004228962.1|3e-20PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS154G10+                   TCAATTGCGTCAAGATTAACGGCGATTTTGCAAGACGGGTCGGGGCACCGGA
JMFS033E08+                                                                      A
                      ____________________________________________________________
consensus                     TCAATTGCGTCAAGATTAACGGCGATTTTGCAAGACGGGTCGGGGCACCGGA
 
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JMFS109C01+           GGTTCAGGCAACCCGGCCCGTCCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS128E07+                                CCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS033C10+                                CCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS154C07+                                CCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS154G10+           GGTTCAGGCAACCCGGCCCGTCCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS033E08+           GGTTCAGACAACCCGGCCCGTCCGCGACGGCGGTGCCGATGTAACTACACCAGCAATCAA
                      ____________________________________________________________
consensus             GGTTCAGGCAACCCGGCCCGTCCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
 
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JMFS109C01+           CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS128E07+           CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS033C10+           CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS154C07+           CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS154G10+           CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS033E08+           CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGCGAGTGATCATCGAAAC
                      ____________________________________________________________
consensus             CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
 
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JMFS109C01+           AGATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS128E07+           AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS033C10+           AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS154C07+           AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS154G10+           AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS033E08+           AAATTCCACAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS054A03+                                  CAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS010B07+                                                              GAGACGAAA
                      ____________________________________________________________
consensus             AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
 
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JMFS109C01+           TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS128E07+           TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS033C10+           TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS154C07+           TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS154G10+           TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS033E08+           TCAGGCCCACCTCTTTCCGAACCGTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS054A03+           TCAGGCCCACCTCTTTCCGAACCGTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS082D01+                 CCACCTCTTTCCGAACCGTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS010B07+           TCAGGCCCACCTCTTTCCGAACCGTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS038G07+                                           TCCGCGAACCACTCCTCGTGCACTCTGT
                      ____________________________________________________________
consensus             TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
 
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JMFS109C01+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS128E07+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS033C10+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS154C07+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS154G10+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS033E08+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS054A03+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS082D01+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS010B07+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS038G07+           TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
                      ____________________________________________________________
consensus             TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
 
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JMFS109C01+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS128E07+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS033C10+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS154C07+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS154G10+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS033E08+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS054A03+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS082D01+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS010B07+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS038G07+           CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
                      ____________________________________________________________
consensus             CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
 
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JMFS109C01+           TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS128E07+           TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS033C10+           TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS154C07+           TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS154G10+           TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS033E08+           TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS054A03+           TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS082D01+           TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS010B07+           TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS038G07+           TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
                      ____________________________________________________________
consensus             TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
 
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JMFS109C01+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS128E07+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS033C10+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS154C07+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS154G10+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS033E08+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS054A03+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS082D01+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS010B07+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS038G07+           CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
                      ____________________________________________________________
consensus             CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
 
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JMFS109C01+           AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS128E07+           AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS033C10+           AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS154C07+           AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS154G10+           AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS033E08+           AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMFS054A03+           AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMFS082D01+           AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMFS010B07+           AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMFS038G07+           AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMSF024M02+                         CCCGGCGAGCCCGTCTCNTCATATAAGCCATCGTCAGAGTCCATAG
                      ____________________________________________________________
consensus             AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
 
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JMFS109C01+           TGTTAGTAGTAGAGTAGAATTTGTGTGGGGTCACAACAA                     
JMFS128E07+           TGTTAGTAGTAGAGTAGAATTTGTGTGGGGTCACAA                        
JMFS033C10+           TGTTAGT                                                     
JMFS154C07+           TGTTAGT                                                     
JMFS154G10+           TGTTAGTAGTAGAGTAGAATTTGTGTGGGGTCACAACAA                     
JMFS033E08+           TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMFS054A03+           TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMFS082D01+           TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMFS010B07+           TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMFS038G07+           TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMSF024M02+           TGTTAGT-GTAGNGAATTTGTTGGATNGTCGAGGTAAACCCCACTANTGACANTCGTGAG
                      ____________________________________________________________
consensus             TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
 
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JMFS033E08+           TATGTGGGTAAAC                                               
JMFS054A03+           TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
JMFS082D01+           TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
JMFS010B07+           TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
JMFS038G07+           TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
JMSF024M02+           TATGTGGGTAAACCCTCNCCNTGCGACCCTAGCCGGCAAAGAGCCACANGGNGGTAAACC
                      ____________________________________________________________
consensus             TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
 
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JMFS054A03+           AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
JMFS082D01+           AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
JMFS010B07+           AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
JMFS038G07+           AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
JMSF024M02+           AGCTTAAGTTTTTCATAGCTGNCCGGCTCAAGGTGGGATCNCANCANTGGAAGGGCANCA
                      ____________________________________________________________
consensus             AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
 
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JMFS054A03+           GA                                                          
JMFS082D01+           GA                                                          
JMFS010B07+           GA                                                          
JMFS038G07+           GA                                                          
JMSF024M02+           NACCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATTAATAAAAACCCTC
                      ____________________________________________________________
consensus             GACCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATTAATAAAAACCCTC