Contig 002247:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS010B07Sequence553002247 (11)ref|XP_009785424.1|4e-21PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS033C10Sequence627002247 (11)ref|XP_009785424.1|8e-48PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS033E08Sequence613002247 (11)ref|XP_009785424.1|1e-40PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS038G07Sequence512002247 (11)ref|XP_009785424.1|7e-17PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS054A03Sequence578002247 (11)ref|XP_009785424.1|3e-21PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS082D01Sequence535002247 (11)ref|XP_009630570.1|1e-19PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana tomentosiformis
JMFS109C01Sequence579002247 (11)ref|XP_009785424.1|2e-41PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS128E07Sequence606002247 (11)ref|XP_009785424.1|3e-40PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS154C07Sequence633002247 (11)ref|XP_009785424.1|2e-47PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMFS154G10Sequence634002247 (11)ref|XP_009785424.1|5e-51PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]
JMSF024M02Sequence302002247 (11)727018217ref|XP_004228962.1|3e-20PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS154G10+ TCAATTGCGTCAAGATTAACGGCGATTTTGCAAGACGGGTCGGGGCACCGGA
JMFS033E08+ A
                      ____________________________________________________________
consensus TCAATTGCGTCAAGATTAACGGCGATTTTGCAAGACGGGTCGGGGCACCGGA
 
. : . : . : . : . : . :
JMFS109C01+ GGTTCAGGCAACCCGGCCCGTCCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS128E07+ CCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS033C10+ CCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS154C07+ CCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS154G10+ GGTTCAGGCAACCCGGCCCGTCCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
JMFS033E08+ GGTTCAGACAACCCGGCCCGTCCGCGACGGCGGTGCCGATGTAACTACACCAGCAATCAA
                      ____________________________________________________________
consensus GGTTCAGGCAACCCGGCCCGTCCGCGACGGCGGTGCCGATGTAGCTACACCAACAATCAA
 
. : . : . : . : . : . :
JMFS109C01+ CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS128E07+ CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS033C10+ CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS154C07+ CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS154G10+ CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
JMFS033E08+ CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGCGAGTGATCATCGAAAC
                      ____________________________________________________________
consensus CACAAAAAGGGTGGCCACACGAGGCGGCGTAAACATTACCGGGAGAGTGATCATCGAAAC
 
. : . : . : . : . : . :
JMFS109C01+ AGATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS128E07+ AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS033C10+ AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS154C07+ AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS154G10+ AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS033E08+ AAATTCCACAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS054A03+ CAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
JMFS010B07+ GAGACGAAA
                      ____________________________________________________________
consensus AAATTCCGCAGCTGATTTCTCCACAATCCTCGATTCTTTTCTCCACACTCTGAGACGAAA
 
. : . : . : . : . : . :
JMFS109C01+ TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS128E07+ TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS033C10+ TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS154C07+ TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS154G10+ TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS033E08+ TCAGGCCCACCTCTTTCCGAACCGTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS054A03+ TCAGGCCCACCTCTTTCCGAACCGTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS082D01+ CCACCTCTTTCCGAACCGTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS010B07+ TCAGGCCCACCTCTTTCCGAACCGTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
JMFS038G07+ TCCGCGAACCACTCCTCGTGCACTCTGT
                      ____________________________________________________________
consensus TCAGGCCCACCTCTTTCCGAACCCTTTCCTCGTCCGCGAACCACTCCTCGTGCACTCTGT
 
. : . : . : . : . : . :
JMFS109C01+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS128E07+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS033C10+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS154C07+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS154G10+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS033E08+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS054A03+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS082D01+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS010B07+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
JMFS038G07+ TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
                      ____________________________________________________________
consensus TAACGCTCCAATTGTAGCGGCGGAGAAGAGCGGAGGCCTCCGCCTTGGACACCGAGAGAA
 
. : . : . : . : . : . :
JMFS109C01+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS128E07+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS033C10+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS154C07+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS154G10+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS033E08+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS054A03+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS082D01+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS010B07+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
JMFS038G07+ CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
                      ____________________________________________________________
consensus CGGCGGTGACTTGGGCTACATCGTCCTCCATGAGACGCCGGATTTCGTCCCCCGTCAAGA
 
. : . : . : . : . : . :
JMFS109C01+ TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS128E07+ TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS033C10+ TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS154C07+ TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS154G10+ TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS033E08+ TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS054A03+ TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS082D01+ TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS010B07+ TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
JMFS038G07+ TTGTGAAATCACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
                      ____________________________________________________________
consensus TTGTGAAATTACTCTCCTCGCCATGATCATCATCGCCGATGAAATCAGGATCCCCCTCCA
 
. : . : . : . : . : . :
JMFS109C01+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS128E07+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS033C10+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS154C07+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS154G10+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS033E08+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS054A03+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS082D01+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS010B07+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
JMFS038G07+ CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
                      ____________________________________________________________
consensus CATCGCCATCGCTCCCGGAGTCTTCGTGGGTAACGTCGCCGTCACCGTCGCTGCCGCCGT
 
. : . : . : . : . : . :
JMFS109C01+ AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS128E07+ AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS033C10+ AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS154C07+ AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS154G10+ AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCGGAGTCCATAG
JMFS033E08+ AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMFS054A03+ AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMFS082D01+ AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMFS010B07+ AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMFS038G07+ AGAAATCATCGTCCCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
JMSF024M02+ CCCGGCGAGCCCGTCTCNTCATATAAGCCATCGTCAGAGTCCATAG
                      ____________________________________________________________
consensus AGAAATCATCGTCGCCCGGCGAGCCCGTCTCATCATATAAGCCATCGTCAGAGTCCATAG
 
. : . : . : . : . : . :
JMFS109C01+ TGTTAGTAGTAGAGTAGAATTTGTGTGGGGTCACAACAA
JMFS128E07+ TGTTAGTAGTAGAGTAGAATTTGTGTGGGGTCACAA
JMFS033C10+ TGTTAGT
JMFS154C07+ TGTTAGT
JMFS154G10+ TGTTAGTAGTAGAGTAGAATTTGTGTGGGGTCACAACAA
JMFS033E08+ TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMFS054A03+ TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMFS082D01+ TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMFS010B07+ TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMFS038G07+ TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
JMSF024M02+ TGTTAGT-GTAGNGAATTTGTTGGATNGTCGAGGTAAACCCCACTANTGACANTCGTGAG
                      ____________________________________________________________
consensus TGTTAGT-GTAGTGAATTTGTTGGATTGTCGAGGTAAACCCCACTACTGACATTCGTGAG
 
. : . : . : . : . : . :
JMFS033E08+ TATGTGGGTAAAC
JMFS054A03+ TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
JMFS082D01+ TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
JMFS010B07+ TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
JMFS038G07+ TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
JMSF024M02+ TATGTGGGTAAACCCTCNCCNTGCGACCCTAGCCGGCAAAGAGCCACANGGNGGTAAACC
                      ____________________________________________________________
consensus TATGTGGGTAAACCCTCGCCTTGCGACCCTAGCCGGCAAAGAGCCACAAGGTGGTAAACC
 
. : . : . : . : . : . :
JMFS054A03+ AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
JMFS082D01+ AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
JMFS010B07+ AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
JMFS038G07+ AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
JMSF024M02+ AGCTTAAGTTTTTCATAGCTGNCCGGCTCAAGGTGGGATCNCANCANTGGAAGGGCANCA
                      ____________________________________________________________
consensus AGCTTAAGTTTTTCATAGCTGACCGGCTCAAGGTGGGATCACAACAATGGAAGGGCAACA
 
. : . : . : . : . : . :
JMFS054A03+ GA
JMFS082D01+ GA
JMFS010B07+ GA
JMFS038G07+ GA
JMSF024M02+ NACCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATTAATAAAAACCCTC
                      ____________________________________________________________
consensus GACCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATTAATAAAAACCCTC