Contig 002243:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006F10Sequence476002243 (4)ref|XP_006432469.1|5e-21hypothetical protein CICLE_v100027482mg, partial [Citrus clementina] gb|ESR45709
JMSF013K12Sequence354002243 (4)743005691 (5)emb|CDO97478.1|2e-54unnamed protein product [Coffea canephora]
JMSF024J09Sequence677002243 (4)emb|CDO97478.1|7e-53unnamed protein product [Coffea canephora]740005691 (5)ref|XP_011087842.1|3e-43PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 [Sesamum
JMSF049D23Sequence660002243 (4)emb|CDO97478.1|5e-57unnamed protein product [Coffea canephora]494005691 (5)gb|ADO86983.1|1e-08SERK3B [Nicotiana benthamiana]

Alignment

This contig is upended


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JMSF049D23+                                       GAGTCGGGGATGGGACCACTCAAGTGGTTCAT
JMSF024J09+                                                      CCACTCAAGTGGTTCAT
                      ____________________________________________________________
consensus                                         GAGTCGGGGATGGGACCACTCAAGTGGTTCAT
 
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JMSF049D23+           GTAAAGATCCAAGCTGACCAAGTTTGTTAAGTTCCCGAGTTCGTTAGGAATTATTCCACT
JMSF024J09+           GTAAAGATCCAAGCTGACCAAGTTTGTTAAGTTCCCGAGTTCGTTAGGAATTATTCCACT
                      ____________________________________________________________
consensus             GTAAAGATCCAAGCTGACCAAGTTTGTTAAGTTCCCGAGTTCGTTAGGAATTATTCCACT
 
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JMSF049D23+           TATATTATTGCTGTAAAGTTCCAAGTACTGCAAATTTGAAAGCAGACCAAGCTGTGGAAC
JMSF024J09+           TATATTATTGCTGTAAAGTTCCAAGTACTGCAAATTTGAAAGCAGACCAAGCTGTGGAAC
                      ____________________________________________________________
consensus             TATATTATTGCTGTAAAGTTCCAAGTACTGCAAATTTGAAAGCAGACCAAGCTGTGGAAC
 
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JMSF049D23+           CAGTTGCCCCGTCAAATTCGCATTTCCCAGATCAACTCTAGTAACACTGTTGTCTGGACT
JMSF006F10+                                           CAACTCTAGTAACACTGTTGTCTGGACT
JMSF024J09+           CAGTTGCCCCGTCAAATTCGCATTTCCCAGATCAACTCTAGTAACACTGTTGTCTGGACT
                      ____________________________________________________________
consensus             CAGTTGCCCCGTCAAATTCGCATTTCCCAGATCAACTCTAGTAACACTGTTGTCTGGACT
 
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JMSF049D23+           ACATGTAACGTGAAACCAAGTGCAGGGATTAACAAGGGTCGAATCCCAGCTCTGCAGAAC
JMSF006F10+           ACATGTAACGTGAAACCAAGTGCAGGGATTAACAAGGGTCGAATCCCAGCTCTGCAGAAC
JMSF024J09+           ACATGTAACGTGAAACCAAGTGCAGGGATTAACAAGGGTCGAATCCCAGCTCTGCAGAAC
                      ____________________________________________________________
consensus             ACATGTAACGTGAAACCAAGTGCAGGGATTAACAAGGGTCGAATCCCAGCTCTGCAGAAC
 
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JMSF049D23+           ATTGTTAGGATCATCCAAATTGGTCTTCAAAGCATTCAAGGCGTCGCCTTCGGCGTTGCC
JMSF006F10+           ATTGTTAGGATCATCCAAATTGGTCTTCAAAGCATTCAAGGCGTCGCCTTCGGCGTTGCC
JMSF024J09+           ATTGTTAGGATCATCCAAATTGGTCTTCAAAGCATTCAAGGCGTCGCCTTCGGCGTTGCC
                      ____________________________________________________________
consensus             ATTGTTAGGATCATCCAAATTGGTCTTCAAAGCATTCAAGGCGTCGCCTTCGGCGTTGCC
 
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JMSF049D23+           GGAGACTAATGGCAGCTGAAGAAACGGCGATAATAAGCAGAAAAGAAGAACCAAACCCGA
JMSF006F10+           GGAGACTAATGGCAGCTGAAGAAACGGCGATAATAAGCAGAAAAGAAGAACCAAACCCGA
JMSF024J09+           GGAGACTAATGGCAGCTGAAGAAACGGCGATAATAAGCAGAAAAGAAGAACCAAACCCGA
                      ____________________________________________________________
consensus             GGAGACTAATGGCAGCTGAAGAAACGGCGATAATAAGCAGAAAAGAAGAACCAAACCCGA
 
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JMSF049D23+           AACCCAGTTCATCCTTCTCTGCTAAATCCCAGATTTCCCTTCATAAGCTCCGATAACTCC
JMSF006F10+           AACCCAGTTCATCCTTCTCTGCTAAATCCCAGATTTCCCTTCATAAGCTCCGATAACTCC
JMSF013K12+                                  AAATCCCAGATTTCCCTTCATCAGNTCCGAGAACTCC
JMSF024J09+           AACCCAGTTCATCCTTCTCTGCTAAATCCCAGATTTCCCTTCATAAGCTCCGATAACTCC
                      ____________________________________________________________
consensus             AACCCAGTTCATCCTTCTCTGCTAAATCCCAGATTTCCCTTCATAAGCTCCGATAACTCC
 
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JMSF049D23+           TCAAAGGAGCTAGTATACCCATGATTCTGAAGAGCAGAAGTACAGAACCGAAGAAAAAGA
JMSF006F10+           TCAAAGGAGCTAGTATACCCATGATTCTGAAGAGCAGAAGTACAGAACCGAAGAAAAAGA
JMSF013K12+           TCAAAAGAGCTAGTATA-CCATGATTCTGAAGAGCAAAAGTACAGAACCGAAGAAAAAGA
JMSF024J09+           TCAAAGGAGCTAGTATACCCATGATTCTGAAGAGCAGAAGTACAGAACCGAAGAAAAAGA
                      ____________________________________________________________
consensus             TCAAAGGAGCTAGTATACCCATGATTCTGAAGAGCAGAAGTACAGAACCGAAGAAAAAGA
 
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JMSF049D23+           TGTCAAAATTCTGAAATAGTGAGAGATTTCCTTGGAAAGTTTGCTTCTTTTTGCTCACTG
JMSF006F10+           TGTCAAAATTCTGAAATAGTGAGAGATTTCCTTGGAAAGTTTGCTTCTTTTTGCTCACTG
JMSF013K12+           TGTCAAAATTNTGAAATAGTGAGAGATTTCCATGGAAAGTTTGCTTCTTTTTGCTCACTG
JMSF024J09+           TGTCAAAATTCTGAAATAGTGAGAGATTTCCTTGGAAAGTTTGCTTCTTTTTGCTCACTG
                      ____________________________________________________________
consensus             TGTCAAAATTCTGAAATAGTGAGAGATTTCCTTGGAAAGTTTGCTTCTTTTTGCTCACTG
 
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JMSF049D23+           GGAATTCAAAAACCTGAGGGAGAGAACGAAAGGGGTAATCTCTTTGAACAGAAGGAGCAG
JMSF006F10+           GGAATTCAAAAACCTGAGGGAGAGAACGAAAGGGGTAATCTCTTTGAACAGAAGGAGCAG
JMSF013K12+           GGAATTCA                                                    
JMSF024J09+           GGAATTCAAAAACCTGAGGGAGAGAACGAAAGGGGTAATCTCTTTGAACAGAAGGAGCAG
                      ____________________________________________________________
consensus             GGAATTCAAAAACCTGAGGGAGAGAACGAAAGGGGTAATCTCTTTGAACAGAAGGAGCAG
 
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JMSF049D23+           AACAGCAATGAATATTCAACTG                                      
JMSF006F10+           AACAGCAATGAATATTCAACTG                                      
JMSF024J09+           AACAGCAATGAATATTCAACTGTCCGTGAGAGAAACGACGTAGTCGTCGCAGAAGACCCA
                      ____________________________________________________________
consensus             AACAGCAATGAATATTCAACTGTCCGTGAGAGAAACGACGTAGTCGTCGCAGAAGACCCA