Contig 002241:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003M06Sequence403002241 (3)652007022 (3)ref|XP_009757714.1|3e-15PREDICTED: uncharacterized protein LOC104210476 isoform X3 [Nicotiana sylvestri
JMSF024G15Sequence738002241 (3)ref|XP_010318734.1|2e-19PREDICTED: uncharacterized protein LOC101253678 isoform X2 [Solanum lycopersicu676007022 (3)ref|XP_006341349.1|109PREDICTED: uncharacterized protein LOC102595715 [Solanum tuberosum]
JMSF025H09Sequence707002241 (3)ref|XP_004236455.1|1e-19PREDICTED: uncharacterized protein LOC101253678 isoform X1 [Solanum lycopersicu195007022 (3)ref|XP_009757723.1|2e-05PREDICTED: uncharacterized protein LOC104210476 isoform X4 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF025H09+                                               CACCAAACCTTTATTCTCCTACCA
JMSF024G15+                                                       CTTTATTCTCCTACCA
                      ____________________________________________________________
consensus                                                 CACCAAACCTTTATTCTCCTACCA
 
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JMSF025H09+           ACCAGCTTTTCAGCTTGCTTTCTTGCCGCCCTTTCAGATGTTGATGGTGCTGAATTGCTT
JMSF024G15+           ACCAGC-TTTCAGCNTGCTTTCTTGCCGCCCTTTCAGATGTTGATGGTGCTGAATTGCTT
                      ____________________________________________________________
consensus             ACCAGCTTTTCAGCTTGCTTTCTTGCCGCCCTTTCAGATGTTGATGGTGCTGAATTGCTT
 
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JMSF025H09+           CTGGAAACCATGCGCTGTTCAACTTCTCGTTTCACTACAGGTAATTCAGCACCATCTCCG
JMSF024G15+           CTGGAAACCATGCGCTGTTCAACTTCTCGTTTCACTACAGGTAATTCAGCACCATCTCCG
                      ____________________________________________________________
consensus             CTGGAAACCATGCGCTGTTCAACTTCTCGTTTCACTACAGGTAATTCAGCACCATCTCCG
 
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JMSF025H09+           ATTAATTCCCAGCGTTCTTTTGAAAGATTCAAAACTTCTACATCTCCATCGTTATAAATG
JMSF024G15+           ATTAATTCCCAGCGTTCTTTTGAAAGATTCAAAACTTCTACATCTCCATCGTTATAAATG
                      ____________________________________________________________
consensus             ATTAATTCCCAGCGTTCTTTTGAAAGATTCAAAACTTCTACATCTCCATCGTTATAAATG
 
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JMSF025H09+           ACCTCGTGCTTCTTCTTGAAATAGTCAAAATAAGTGATACTACCTTCATAGAACGTCTGT
JMSF024G15+           ACCTCGTGCTTCTTCTTGAAATAGTCAAAATAAGTGATACTACCTTCATAGAACGTCTGT
                      ____________________________________________________________
consensus             ACCTCGTGCTTCTTCTTGAAATAGTCAAAATAAGTGATACTACCTTCATAGAACGTCTGT
 
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JMSF025H09+           TCAAACGTCCACCAAACCTTTATTCTCCTACCAACCAGCTTTTCAGCTTGCTTTCTTGCC
JMSF024G15+           TCAAACGTCCACCAAACCTTTATTCTCCTACCAACCAGCTTTTCAGCTTGCTTTCTTGCC
                      ____________________________________________________________
consensus             TCAAACGTCCACCAAACCTTTATTCTCCTACCAACCAGCTTTTCAGCTTGCTTTCTTGCC
 
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JMSF025H09+           GCCTTTTCTGAAAGAGAACACTCCCTCTTACAGTTTTTTGAAGTTTCACCACTGTTGCTC
JMSF024G15+           GCCTTTTCTGAAAGAGAACACTCCCTCTTACAGTTTTTTGAAGTTTCACCACTGTTGCTC
                      ____________________________________________________________
consensus             GCCTTTTCTGAAAGAGAACACTCCCTCTTACAGTTTTTTGAAGTTTCACCACTGTTGCTC
 
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JMSF025H09+           CGTTTTTTAGTAGAAGCAGAACGATAACTACCATCACTTGGTTTCTTTTCCTCTTCTGAA
JMSF024G15+           CGTTTTTTAGTAGAAGCAGAACGATAACTACCATCACTTGGTTTCTTTTCCTCTTCTGAA
                      ____________________________________________________________
consensus             CGTTTTTTAGTAGAAGCAGAACGATAACTACCATCACTTGGTTTCTTTTCCTCTTCTGAA
 
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JMSF025H09+           CCTTTTAGCGAATCTGAAACTGGCATCAATTATTCACCGTCACTTGGTTTGTTTTCCTCT
JMSF024G15+           CCTTTTAGCGAATCTGAAACTGGCATCAATTATTCACCGTCACTTGGTTTGTTTTCCTCT
                      ____________________________________________________________
consensus             CCTTTTAGCGAATCTGAAACTGGCATCAATTATTCACCGTCACTTGGTTTGTTTTCCTCT
 
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JMSF025H09+           TCAATAGTGTTGAGACTTTGAGATGCGGTAGGCTTTAAGATCTCAGCCTCACTCATACCT
JMSF003M06+                                                                  TACCT
JMSF024G15+           TCAATAGTGTTGAGACTTTGAGATGCGGTAGGCTTTAAGATCTCAGCCTCACTCATACCT
                      ____________________________________________________________
consensus             TCAATAGTGTTGAGACTTTGAGATGCGGTAGGCTTTAAGATCTCAGCCTCACTCATACCT
 
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JMSF025H09+           TGGTTCACAGGGGAAGCTAAGGCGGAGAACGGGCAGCAGTTTCGTCGTCGTCGTCAGCAG
JMSF003M06+           TGGTTCACAGGGGAAGCTAAGGCGGAGAACGGGCAGCAGTTTCGTCGTCGTCGTCAGCAG
JMSF024G15+           TGGTTCACAGGGGAAGCTAAGGCGGAGAACGGGCAGCAGTTTCGTCGTCGTCGTCAGCAG
                      ____________________________________________________________
consensus             TGGTTCACAGGGGAAGCTAAGGCGGAGAACGGGCAGCAGTTTCGTCGTCGTCGTCAGCAG
 
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JMSF025H09+           GGGCTGAGGCGGAGACCGGGCAGCAGCTTCTTCGTCGGCGAGGGCGGAGGCGGAGTCTTC
JMSF003M06+           GGGCTGAGGCGGAGACCGGGCAGCAGCTTCTTCGTCGGCGAGGGCGGAGGCGGAGTCTTC
JMSF024G15+           GGGCTGAGGCGGAGACCGGGCAGCAGCTTCTTCGTCGGCGAGGGCGGAGGCGGAGTCTTC
                      ____________________________________________________________
consensus             GGGCTGAGGCGGAGACCGGGCAGCAGCTTCTTCGTCGGCGAGGGCGGAGGCGGAGTCTTC
 
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JMSF025H09+           CGGTGTTGCTGTCGGCTGAGTT                                      
JMSF003M06+           CGGTGTTGCTGTCGGCTGAGTTAGGGCTTGGGAGTT                        
JMSF024G15+           CGGTGTTGCTGTCGGCTGAGTTAGGGCTTGGGAGTTGGGGAAGCGATAGAAAGGTATAAC
                      ____________________________________________________________
consensus             CGGTGTTGCTGTCGGCTGAGTTAGGGCTTGGGAGTTGGGGAAGCGATAGAAAGGTATAAC