| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS090F03 | Sequence | 622 | 002235 (8) | ref|XP_009788205.1| | 176 | PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris] | |||||
| JMFS092H02 | Sequence | 615 | 002235 (8) | ref|XP_009788205.1| | 173 | PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris] | |||||
| JMFS150A07 | Sequence | 535 | 002235 (8) | ref|XP_009788205.1| | 129 | PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris] | |||||
| JMSF003I22 | Sequence | 324 | 002235 (8) | 680 | 007112 (3) | emb|CDP14061.1| | 1e-51 | unnamed protein product [Coffea canephora] | |||
| JMSF005A10 | Sequence | 257 | 002235 (8) | 278 | 008436 (6) | ||||||
| JMSF022G09 | Sequence | 641 | 002235 (8) | ref|XP_009788205.1| | 176 | PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris] | 736 | 007112 (3) | emb|CDP14061.1| | 4e-50 | unnamed protein product [Coffea canephora] |
| JMSF023H18 | Sequence | 649 | 002235 (8) | ref|XP_009788205.1| | 175 | PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris] | 667 | 007112 (3) | emb|CDP14061.1| | 1e-50 | unnamed protein product [Coffea canephora] |
| JMSF030N10 | Sequence | 647 | 002235 (8) | ref|XP_009788205.1| | 180 | PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris] | 383 | 022578 | ref|XP_009788205.1| | 88.2 | PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS092H02+ CTGAAACCAGAGGAATGCACAAGCATCTGGCCAGGATAC
JMSF030N10+ TTCCAACACGCACTGAAACCAGAGGAATGCACAAGCATCTGGCCAGGATAC
JMSF022G09+ ACGCACTGAAACCAGAGGAATGCACAAGCATCTGGCCAGGATAC
JMFS090F03+ ACGCACTGAAACCAGAGGAATGCACAAGCATCTGGCCAGGATAC
JMSF023H18+ ACGCACTGAAACCAGAGGAATGCACAAGCATCTGGCCAGGATAC
____________________________________________________________
consensus TTCCAACACGCACTGAAACCAGAGGAATGCACAAGCATCTGGCCAGGATAC
. : . : . : . : . : . :
JMFS092H02+ CAACCTCTGCCGGATCAAAGTGCTGACTGAGATAAGCGAGTAAGCAATCCTCCGCGGCAC
JMFS150A07+ AGCGAGTAAGCAATCCTCCGCGGCAC
JMSF030N10+ CAACCTCTGCCGGATCAAAGTGCTGACTGAGATAAGCGAGTAAGCAATCCTCCGCGGCAC
JMSF022G09+ CAACCTCTGCCGGATCAAAGTGCTGACTGAGATAAGCGAGTAAGCAATCCTCCGCGGCAC
JMFS090F03+ CAACCTCTGCCGGATCAAAGTGCTGACTGAGATAAGCGAGTAAGCAATCCTCCGCGGCAC
JMSF023H18+ CAACCTCTGCCGGATCAAAGTGCTGACTGAGATAAGCGAGTAAGCAATCCTCCGCGGCAC
____________________________________________________________
consensus CAACCTCTGCCGGATCAAAGTGCTGACTGAGATAAGCGAGTAAGCAATCCTCCGCGGCAC
. : . : . : . : . : . :
JMFS092H02+ CGGTGGAGACATTCATCTTCAACAAAGGCTTCAGCCTCTCATCGGCTCGACACGCGCCCA
JMFS150A07+ CGGTGGAGACATTCATCTTCAACAAAGGCTTCAGCCTCTCATCGGCTCGACACGCGCCCA
JMSF030N10+ CGGTGGAGACATTCATCTTCAACAAAGGCTTCAGCCTCTCATCGGCTCGACACGCGCCCA
JMSF022G09+ CGGTGGAGACATTCATCTTCAACAAAGGCTTCAGCCTCTCATCGGCTCGACACGCGCCCA
JMFS090F03+ CGGTGGAGACATTCATCTTCAACAAAGGCTTCAGCCTCTCATCGGCTCGACACGCGCCCA
JMSF023H18+ CGGTGGAGACATTCATCTTCAACAAAGGCTTCAGCCTCTCATCGGCTAGACACGCGCCCA
____________________________________________________________
consensus CGGTGGAGACATTCATCTTCAACAAAGGCTTCAGCCTCTCATCGGCTCGACACGCGCCCA
. : . : . : . : . : . :
JMFS092H02+ TCACCTGCATATCCAGAGCCTGAAGCCACTGAAAAACACTGCCTTCTCGATCGCTCCGTT
JMFS150A07+ TCACCTGCATATCCAGAGCCTGAAGCCACTGAAAAACACTGCCTTCTCGATCGCTCCGTT
JMSF030N10+ TCACCTGCATATCCAGAGCCTGAAGCCACTGAAAAACACTGCCTTCTCGATCGCTCCGTT
JMSF022G09+ TCACCTGCATATCCAGAGCCTGAAGCCACTGAAAAACACTGCCTTCTCGATCGCTCCGTT
JMFS090F03+ TCACCTGCATATCCAGAGCCTGAAGCCACTGAAAAACACTGCCTTCTCGATCGCTCCGTT
JMSF023H18+ TCACCTGCATATCCAGAGCCTGAAGCCACTGAAAAACACTGCCTTCTCGATCGCTCCGTT
____________________________________________________________
consensus TCACCTGCATATCCAGAGCCTGAAGCCACTGAAAAACACTGCCTTCTCGATCGCTCCGTT
. : . : . : . : . : . :
JMFS092H02+ GAAGCAATAGATCTCCATCGCCGTCCTCCACCAGGATCTCCGTCAACCTCTCCACAAGCC
JMFS150A07+ GAAGCAATAGATCTCCATCGCCGTCCTCCACCAGGATCTCCGTCAACCTCTCCACAAGCC
JMSF030N10+ GAAGCAATAGATCTCCATCGCCGTCCTCCACCAGGATCTCCGTCAACCTCTCCACAAGCC
JMSF022G09+ GAAGCAATAGATCTCCATCGCCGTCCTCCACCAGGATCTCCGTCAACCTCTCCACAAGCC
JMFS090F03+ GAAGCAATAGATCTCCATCGCCGTCCTCCACCAGGATCTCCGTCAACCTCTCCACAAGCC
JMSF023H18+ GAAGCAATAGATCTCCATCGCCGTCCTCCACCAGGATCTCCGTCAACCTCTCCACAAGCC
____________________________________________________________
consensus GAAGCAATAGATCTCCATCGCCGTCCTCCACCAGGATCTCCGTCAACCTCTCCACAAGCC
. : . : . : . : . : . :
JMFS092H02+ CCGAGCTCCCTCGGCTAACTCCACCTTCCGTCGCAGTACCGCCCGTCTCGGTCCCTTCAA
JMFS150A07+ CCGAGCTCCCTCGGCTAACTCCACCTTCCGTCGCAGTACCGCCCGTCTCGGTCCCTTCAA
JMSF030N10+ CCGAGCTCCCTCGGCTAACTCCACCTTCCGTCGCAGTACCGCCCGTCTCGGTCCCTTCAA
JMSF022G09+ CCGAGCTCCCTCGGCTAACTCCACCTTCCGTCGCAGTACCGCCCGTCTCGGTCCCTTCAA
JMFS090F03+ CCGAGCTCCCTCGGCTAACTCCACCTTCCGTCGCAGTACCGCCCGTCTCGGTCCCTTCAA
JMSF003I22+ GCAGTACCGCCCGTCTCGGTCCCTTCAA
JMSF023H18+ CCGAGCTCCCTCGGCTAACTCCACCTTCCGTCGCAGTACCGCCCGTCTCGGTCCCTTCAA
____________________________________________________________
consensus CCGAGCTCCCTCGGCTAACTCCACCTTCCGTCGCAGTACCGCCCGTCTCGGTCCCTTCAA
. : . : . : . : . : . :
JMFS092H02+ TTGCGTGACCACCGATAGAATCCTCAACACCATCCATCTCCCGATCGTTCAACGATTGTT
JMFS150A07+ TTGCGTGACCACCGATAGAATCCTCAACACCATCCATCTCCCGATCGTTCAACGATTGTT
JMSF030N10+ TTGCGTGACCACCGATAGAATCCTCAACACCATCCATCTCCCGATCGTTCAACGATTGTT
JMSF022G09+ TTGCGTGACCACCGATAGAATCCTCAACACCATCCATCTCCCGATCGTTCAACGATTGTT
JMFS090F03+ TTGCGTGACCACCGATAGAATCCTCAACACCATCCATCTCCCGATCGTTCAACGATTGTT
JMSF003I22+ TTGCGTGACCACCGATAGAATCCTCAACACCATCCATCTCCCGATCGTTCAACGATTGTT
JMSF005A10+ CCCGATCGTTCAACGATTGTT
JMSF023H18+ TTGCGTGACCACCGATAGAATCCTCAACACCATCCATCTCCCGATCGTTCAACGATTGTT
____________________________________________________________
consensus TTGCGTGACCACCGATAGAATCCTCAACACCATCCATCTCCCGATCGTTCAACGATTGTT
. : . : . : . : . : . :
JMFS092H02+ TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
JMFS150A07+ TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
JMSF030N10+ TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
JMSF022G09+ TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
JMFS090F03+ TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
JMSF003I22+ TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
JMSF005A10+ TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
JMSF023H18+ TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
____________________________________________________________
consensus TCTTCTCACCATTAACCATTTTAATTCTCAGATTAGAATATTAGATTAATTATGTTCAAA
. : . : . : . : . : . :
JMFS092H02+ TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
JMFS150A07+ TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
JMSF030N10+ TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
JMSF022G09+ TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
JMFS090F03+ TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
JMSF003I22+ TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
JMSF005A10+ TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
JMSF023H18+ TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
____________________________________________________________
consensus TCCCCGACCCGCCCCGCTACCAACAAATTGCAATCGAGATCGTTGCAACGCTCAATCCGA
. : . : . : . : . : . :
JMFS092H02+ TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
JMFS150A07+ TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
JMSF030N10+ TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
JMSF022G09+ TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
JMFS090F03+ TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
JMSF003I22+ TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
JMSF005A10+ TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
JMSF023H18+ TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
____________________________________________________________
consensus TACTCTAATTCAATTCCGATCGTAACAAAACTTTGGATCTCGGCCTCTCGGAGATAGAAG
. : . : . : . : . : . :
JMFS092H02+ AGTCAAATTCGGAGAGGGATAAAATGATAAATCTCG
JMFS150A07+ AGTCAAATTCGGAGAGGGATAAAATGATA
JMSF030N10+ AGTCAAATTCGGAGAGGGATAAAATGATAAATCTCGCGATAACAAAAAGCAGCTC
JMSF022G09+ AGTCAAATTCGGAGAGGGATAAAATGATAAATCTCGCGATAACAAAAAGCAGCTC
JMFS090F03+ AGTCAAATTCGGAGAGGGATAAAATGATAAATCTCGC
JMSF003I22+ AGTCAAATTCGGAGAGGGATAAAATGATAAATCTCGCGATAACAAAAAGCA
JMSF005A10+ AGTCAAATTCGGAGAGGGATAAAATGATAAATCTCGCGATAACAAAAAGCAGCTC
JMSF023H18+ AGTCAAATTCGGAGAGGGATAAAATGATAAATCTCGCGATAACAAAAAGCAGCTCGAAAC
____________________________________________________________
consensus AGTCAAATTCGGAGAGGGATAAAATGATAAATCTCGCGATAACAAAAAGCAGCTCGAAAC