Contig 002231:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001N01Sequence402002231 (3)ref|XP_010031110.1|2e-32PREDICTED: uncharacterized protein LOC104421001 isoform X2 [Eucalyptus grandis]730014938gb|KDP21671.1|1e-59hypothetical protein JCGZ_03342 [Jatropha curcas]
JMSF023D09Sequence684002231 (3)ref|XP_009758903.1|5e-75PREDICTED: uncharacterized protein LOC104211531 isoform X5 [Nicotiana sylvestri722005776 (2)ref|XP_009771590.1|298PREDICTED: uncharacterized protein LOC104222105 [Nicotiana sylvestris]
JMSF039F09Sequence641002231 (3)ref|XP_009758902.1|4e-67PREDICTED: uncharacterized protein LOC104211531 isoform X4 [Nicotiana sylvestri845005776 (2)ref|XP_009771590.1|357PREDICTED: uncharacterized protein LOC104222105 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF023D09+ TGACTCACTATCCATCACATCAAT
                      ____________________________________________________________
consensus TGACTCACTATCCATCACATCAAT
 
. : . : . : . : . : . :
JMSF039F09+ CCAAGTCGAGGAGATTGTGAGAAGATTAAGCAGCGCAACCCAAAGGAAAAA
JMSF023D09+ TACTCTAGCCCAAGTCGAGGAGATTGTGAGAAGATTAAGCAGCGCAACCCAAAGGAAAAA
                      ____________________________________________________________
consensus TACTCTAGCCCAAGTCGAGGAGATTGTGAGAAGATTAAGCAGCGCAACCCAAAGGAAAAA
 
. : . : . : . : . : . :
JMSF039F09+ GCCAATTCTCACAGAGATGTAAAACCATCCATGGTTGCCCCACCCAGCCAAAGATGAAGG
JMSF023D09+ GCCAATTCTCACAGAGATGTAAAACCATCCATGGTTGCCCCACCCAGCCAAAGATGAAGG
                      ____________________________________________________________
consensus GCCAATTCTCACAGAGATGTAAAACCATCCATGGTTGCCCCACCCAGCCAAAGATGAAGG
 
. : . : . : . : . : . :
JMSF039F09+ AATAGTTTGGTCAACATTGACCTTCAACTCCTCTTTTACATTGGACATGGAGAGAAATCC
JMSF023D09+ AATAGTTTGGTCAAAATTGACCTTCAACTCCTCTTTTACATTGGACATGGAGAGAAATCC
                      ____________________________________________________________
consensus AATAGTTTGGTCAACATTGACCTTCAACTCCTCTTTTACATTGGACATGGAGAGAAATCC
 
. : . : . : . : . : . :
JMSF039F09+ CTTGAGATGAAAAATTGAGCTTCCCGGTGTAGAAGAAACCCACAAGGTAAAAAATACAAA
JMSF023D09+ CTTGAGATGAAAAATTGAGCTTCCCGGTGTAGAAGAAACCCACAAGGTAAAAAATACAAA
                      ____________________________________________________________
consensus CTTGAGATGAAAAATTGAGCTTCCCGGTGTAGAAGAAACCCACAAGGTAAAAAATACAAA
 
. : . : . : . : . : . :
JMSF039F09+ AAGAGAAATCGCAAAGAACCTGTGTATCAAGGCCAGAGCCTTGGCTTTGGAAAGATTAGG
JMSF001N01+ TCGCAAAGAACCTGTGTATCAAGGCCAGAGCCTTGGCTTTGGAAAGATTAGG
JMSF023D09+ AAGAGAAATCGCAAAGAACCTGTGTATCAAGGCCAGAGCCTTGGCTTTGGAAAGATTAGG
                      ____________________________________________________________
consensus AAGAGAAATCGCAAAGAACCTGTGTATCAAGGCCAGAGCCTTGGCTTTGGAAAGATTAGG
 
. : . : . : . : . : . :
JMSF039F09+ CAATGTGAAAATCAGTGTGGAAAGCGGGGCAGCAACCAATGTAAGAACTAACGATCCCAC
JMSF001N01+ CAATGTGAAAATCAGTGTGGAAAGCGGGGCAGCAACCAATGTAAGAACTAACGATCCCAC
JMSF023D09+ CAATGTGAAAATCAGTGTGGAAAGCGGGGCAGCAACCAATGTAAGAACTAACGATCCCAC
                      ____________________________________________________________
consensus CAATGTGAAAATCAGTGTGGAAAGCGGGGCAGCAACCAATGTAAGAACTAACGATCCCAC
 
. : . : . : . : . : . :
JMSF039F09+ AAATAAACCTGGTAAATTCCCTAACCCTAACGACATTGCGCCATCATCTCGTAAAGGAAG
JMSF001N01+ AAATAAACCTGGTAAATTCCCTAACCCTAACGACATTGCGCCATCATCTCGTAAAGGAAG
JMSF023D09+ AAATAAACCTGGTAAATTCCCTAACCCTAACGACATTGCGCCATCATCTCGTAAAGGAAG
                      ____________________________________________________________
consensus AAATAAACCTGGTAAATTCCCTAACCCTAACGACATTGCGCCATCATCTCGTAAAGGAAG
 
. : . : . : . : . : . :
JMSF039F09+ AACTACAAAATACGCACTTAGAATGAAGAAGAAAGTGGAGGCGGAAGATAGCAAAGCCGA
JMSF001N01+ AACTACAAAATACGCACTTAGAATGAAGAAGAAAGTGGAGGCGGAAGATAGCAAAGCCGA
JMSF023D09+ AACTACAAAATACGCACTTAGAATGAAGAAGAAAGTGGAGGCGGAAGATAGCAAAGCCGA
                      ____________________________________________________________
consensus AACTACAAAATACGCACTTAGAATGAAGAAGAAAGTGGAGGCGGAAGATAGCAAAGCCGA
 
. : . : . : . : . : . :
JMSF039F09+ GGTTTCGTGAGGGTGAACAGTGACGAACCACGACAAGATTGCGTGTGATCGAGGAGTTTT
JMSF001N01+ GGTTTCGTGAGGGTGAACAGTGACGAACCACGACAAGATTGCGTGTGATCGAGGAGTTTT
JMSF023D09+ GGTTTCGTGAGGGTGAACAGTGACGAACCACGACAAGATTGCGTGTGATCGAGGAGTTTT
                      ____________________________________________________________
consensus GGTTTCGTGAGGGTGAACAGTGACGAACCACGACAAGATTGCGTGTGATCGAGGAGTTTT
 
. : . : . : . : . : . :
JMSF039F09+ AGCCTCCATATTCATCGCCTTCCCCTTGTACCTCTCACTGGAATTCTTACGCCCTAAAGA
JMSF001N01+ AGCCTCCATATTCATCGCCTTCCCCTTGTACCTCTCACTGGAATTCTTACGCCCTAAAGA
JMSF023D09+ AGCCTCCATATTCATCGCCTTCCCCTTGTACCTCTCACTGGAATTCTTACGCCCTAAAGA
                      ____________________________________________________________
consensus AGCCTCCATATTCATCGCCTTCCCCTTGTACCTCTCACTGGAATTCTTACGCCCTAAAGA
 
. : . : . : . : . : . :
JMSF039F09+ ATTTAGTGTGTTGTTTTCTCTTTCTCTACCAAAACTTCCATGGATC
JMSF001N01+ ATTTAGTGTGTTGTTTTCTCTTTCTCTACCAAAACTTCCATGGATC
JMSF023D09+ ATTTAGTGTGTTGTTTTCTCTTTCTCTACCAAAACTTCCATGGATCCTCATCAGAAAACC
                      ____________________________________________________________
consensus ATTTAGTGTGTTGTTTTCTCTTTCTCTACCAAAACTTCCATGGATCCTCATCAGAAAACC