Contig 002230:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017N01Sequence544002230 (5)ref|XP_009770858.1|2e-92PREDICTED: uncharacterized protein At4g14100-like isoform X1 [Nicotiana sylvest660002230 (5)ref|XP_009770858.1|4e-92PREDICTED: uncharacterized protein At4g14100-like isoform X1 [Nicotiana sylvest
JMFN008I01Sequence615002230 (5)ref|XP_010250496.1|4e-84PREDICTED: uncharacterized protein At4g14100-like [Nelumbo nucifera]
JMFS050G12Sequence544002230 (5)ref|XP_009770858.1|4e-85PREDICTED: uncharacterized protein At4g14100-like isoform X1 [Nicotiana sylvest
JMSF023C20Sequence725002230 (5)ref|XP_009770858.1|1e-92PREDICTED: uncharacterized protein At4g14100-like isoform X1 [Nicotiana sylvest147002634 (10)ref|XP_004146887.1|2e-13PREDICTED: 60S ribosomal protein L13-2-like isoform 1 [Cucumis sativus] ref|XP_

Alignment

This contig is upended


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rJMFF017N01-                                                   AATACTTCATTGTAAAGAA
                      ____________________________________________________________
consensus                                                      AATACTTCATTGTAAAGAA
 
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rJMFF017N01-          TCATGAGTGCTTGGAGTAAATTTTTATTTTTAAAATTTGCAATAAGGGTTAGATATGAAC
                      ____________________________________________________________
consensus             TCATGAGTGCTTGGAGTAAATTTTTATTTTTAAAATTTGCAATAAGGGTTAGATATGAAC
 
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rJMFF017N01-          AAGACAAATATGTAAAAGGCTAAAGCGACACAGAAACATCGAAAGCTCTTCCCAGGCGCA
JMFF017N01+                                                         TCTTCCCAGGCGCA
                      ____________________________________________________________
consensus             AAGACAAATATGTAAAAGGCTAAAGCGACACAGAAACATCGAAAGCTCTTCCCAGGCGCA
 
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rJMFF017N01-          GCGGCTTGGCATCAGAGACAATGGGACTGCCCAAAGACTCAACTGTAGAGTTGTTGAAGC
JMFF017N01+           GCGGCTTGGCATCAGAGACAATGGGACTGCCCAAAGACTCAACTGTAGAGTTGTTGAAGC
JMSF023C20+                   GCATCAGAGACAATGGGACTGCCCAAAGACTCAACTGTAGAGTTGTTGAAGC
                      ____________________________________________________________
consensus             GCGGCTTGGCATCAGAGACAATGGGACTGCCCAAAGACTCAACTGTAGAGTTGTTGAAGC
 
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rJMFF017N01-          AGTAGAGGGGGGCTTGCCAATTTGGGTCCGACAGAACTTTTCCCACTTCAAATGTCATCA
JMFF017N01+           AGTAGAGGGGGGCTTGCCAATTTGGGTCCGACAGAACTTTTCCCACTTCAAATGTCATCA
JMFN008I01+                                  GGGTCCGACAGAACTTTTCCCACTTCAAATGTCATCA
JMFS050G12+                           CCAATTTGGGTCTGACAGAACTTTTCCCACTTCAAATGTCATCA
JMSF023C20+           AGTAGAGGGGGGCTTGCCAATTTGGGTCCGACAGAACTTTTCCCACTTCAAATGTCATCA
                      ____________________________________________________________
consensus             AGTAGAGGGGGGCTTGCCAATTTGGGTCCGACAGAACTTTTCCCACTTCAAATGTCATCA
 
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rJMFF017N01-          CATGTGCCACCATTCCTGTGTAGAAAGCCCAATAAACAGGTCTTTTAGAGACGACATCCT
JMFF017N01+           CATGTGCCACCATTCCTGTGTAGAAAGCCCAATAAACAGGTCTTTTAGAGACGACATCCT
JMFN008I01+           CATGTGCCACCATTCCTGTGTAGAAAGCCCAATAAACAGGTCTTTTAGAGACGACATCCT
JMFS050G12+           CATGTGCCACCATTCCTGTGTAGAAAGCCCAATAAACAGGTCTTTTAGAGACGACATCCT
JMSF023C20+           CATGTGCCACCATTCCTGTGTAGAAAGCCCAATAAACAGGTCTTTTAGAGACGACATCCT
                      ____________________________________________________________
consensus             CATGTGCCACCATTCCTGTGTAGAAAGCCCAATAAACAGGTCTTTTAGAGACGACATCCT
 
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rJMFF017N01-          CGTAGTACCAGATAAACTCAACCTTCTCCCACACATTACACAGGAACCCATCCATGTACT
JMFF017N01+           CGTAGTACCAGATAAACTCAACCTTCTCCCACACATTACACAGGAACCCATCCATGTACT
JMFN008I01+           CGTAGTACCAGATAAACTCAACCTTCTCCCACACATTACACAGGAACCCATCCATGTACT
JMFS050G12+           CGTAGTACCAGATAAACTCAACCTTCTCCCACACATTACACAGGAACCCATCCATGTACT
JMSF023C20+           CGTAGTACCAGATAAACTCAACCTTCTCCCACACATTACACAGGAACCCATCCATGTACT
                      ____________________________________________________________
consensus             CGTAGTACCAGATAAACTCAACCTTCTCCCACACATTACACAGGAACCCATCCATGTACT
 
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rJMFF017N01-          TCTGACCCAGGTAGTTCGCCCCATCAAGCCAGTCGGGTCTGAGGATGCCCACCGGCACGT
JMFF017N01+           TCTGACCCAGGTAGTTCGCCCCATCAAGCCAGTCGGGTCTGAGGATGCCCACCGGCACGT
JMFN008I01+           TCTGACCCAGGTAGTTCGCCCCATCAAGCCAGTCGGGTCTGAGGATGCCCACCGGCACGT
JMFS050G12+           TCTGACCCAGGTAGTTCGCCCCATCAAGCCAGTCGGGTCTGAGGATGCCCACCGGCACGT
JMSF023C20+           TCTGACCCAGGTAGTTCGCCCCATCAAGCCAGTCGGGTCTGAGGATGCCCACCGGCACGT
                      ____________________________________________________________
consensus             TCTGACCCAGGTAGTTCGCCCCATCAAGCCAGTCGGGTCTGAGGATGCCCACCGGCACGT
 
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rJMFF017N01-          CCAATACTTGGCACTCGCGGCTCGAGTCCAACGTGTATATGAAGGATGTCCCGTTGTTCC
JMFF017N01+           CCAATACTTGGCACTCGCGGCTCGAGTCCAACGTGTATATGAAGGATGTCCCGTTGTTCC
JMFN008I01+           CCAATACTTGGCACTCGCGGCTCGAGTCCAACGTGTATATGAAGGATGTCCCGTTGTTCC
JMFS050G12+           CCAATACTTGGCACTCGCGGCTCGAGTCCAACGTGTATATGAAGGATGTCCCGTTGTTCC
JMSF023C20+           CCAATACTTGGCACTCGCGGCTCGAGTCCAACGTGTATATGAAGGATGTCCCGTTGTTCC
                      ____________________________________________________________
consensus             CCAATACTTGGCACTCGCGGCTCGAGTCCAACGTGTATATGAAGGATGTCCCGTTGTTCC
 
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rJMFF017N01-          ATTCCAGGTCGTACACGAGGTTACCCAGCTGGTTCTGGATGATGTTGAAGTTCCTGCCGT
JMFF017N01+           ATTCCAGGTCGTACACGAGGTTACCCAGCTGGTTCTGGATGATGTTGAAGTTCCTGCCGT
JMFN008I01+           ATTCCAGGTCGTACACGAGGTTACCCAGCTGGTTCTGGATGATGTTGAAGTTCCTGCCGT
JMFS050G12+           ATTCCAGGTCGTACACGAGGTTACCCAGCTGGTTCTGGATGATGTTGAAGTTCCTGCCGT
JMSF023C20+           ATTCCAGGTCGTACACGAGGTTACCCAGCTGGTTCTGGATGATGTTGAAGTTCCTGCCGT
                      ____________________________________________________________
consensus             ATTCCAGGTCGTACACGAGGTTACCCAGCTGGTTCTGGATGATGTTGAAGTTCCTGCCGT
 
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rJMFF017N01-          TGGGCCAATCGTACCAGAGATCAATCATCTGCAGAGTGCCCTTGCTGGTGATGTTGACGA
JMFF017N01+           TGGGCCAATCGTACCAGAGATCAATCATCTGCAGAGTGCCCTTGCTGGTGATGTTGACGA
JMFN008I01+           TGGGCCAATCGTACCAGAGATCAATCATCTGCAGAGTGCCCTTGCTGGTGATGTTGATGA
JMFS050G12+           TGGGCCAATCGTACCAGAGATCAATCATCTGCAGAGTGCCCTTGCTGGTGATGTTGATGA
JMSF023C20+           TGGGCCAATCGTACCAGAGATCAATCATCTGCAGAGTGCCCTTGCTGGTGATGTTGATGA
                      ____________________________________________________________
consensus             TGGGCCAATCGTACCAGAGATCAATCATCTGCAGAGTGCCCTTGCTGGTGATGTTGATGA
 
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rJMFF017N01-          AGAGGATTGAGTGGAATTGCAGCGGCCATGGGG                           
JMFF017N01+           AGAGGATTGAGTGGAATTGCAGCGGCCATGGGGTGGGGAC                    
JMFN008I01+           AGAGGATTGAGTGGAATTGCAGCGGCCATGGGGTGGGGACCGGCTCCGGATCTCCGGCAT
JMFS050G12+           AGAGGATTGAGTGGAATTGCAGCGGCCATGGGGTGGGGACCGGCTCCGGATCTCCGGCAT
JMSF023C20+           AGAGGATTGAGTGGAATTGCAGCGGCCATGGGGTGGGGACCGGCTCCGGATCTCCGGCAT
                      ____________________________________________________________
consensus             AGAGGATTGAGTGGAATTGCAGCGGCCATGGGGTGGGGACCGGCTCCGGATCTCCGGCAT
 
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JMFN008I01+           TCGGGTTTGATTCGGTCGAGGAGAAGAAGAAGAAGAGGGATGCGAGGGTGAGGGCGGAGA
JMFS050G12+           TCGGGTTTGATTCGGTCGAGGAGAAGAAGAAGAAGAGGGATGCGAGGGTGAGGGCGGAGA
JMSF023C20+           TCGGGTTTGATTCGGTCGAGGAGAAGAAGAAGAAGAGGGATGCGAGGGTGAGGGCGGAGA
                      ____________________________________________________________
consensus             TCGGGTTTGATTCGGTCGAGGAGAAGAAGAAGAAGAGGGATGCGAGGGTGAGGGCGGAGA
 
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JMFN008I01+           TGATGAAGGGGAGAGTGGAGATTTTGGGGTTTCTTGAAAACTGCATTTCTTGTTTGGAAA
JMFS050G12+           TGATGAAGGGGAGAGTGGAG                                        
JMSF023C20+           TGATGAAGGGGAGAGTGGAGATTTTGGGGTTTCTTGAAAACTGCATTTCTTGTTTGGAAA
                      ____________________________________________________________
consensus             TGATGAAGGGGAGAGTGGAGATTTTGGGGTTTCTTGAAAACTGCATTTCTTGTTTGGAAA
 
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JMFN008I01+           AAGAATGGTAATGAGTGGACATAGATAAGGTTGTTCTA                      
JMSF023C20+           AAGAATGGTAATGAGTGGACATAGATAAGGTTGTTCTAGTTAGATTCTACGGAGTACTCA
                      ____________________________________________________________
consensus             AAGAATGGTAATGAGTGGACATAGATAAGGTTGTTCTAGTTAGATTCTACGGAGTACTCA