Contig 002228:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF023A13+                                             AGTCAGAGAACTGAACTGCAGGTTAG
                      ____________________________________________________________
consensus                                               AGTCAGAGAACTGAACTGCAGGTTAG
 
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JMSF023A13+           GATAAAGAAACAAGAGGGGCATTTCAACTAGGAAAAGAGACCTGGTTCTTCAACAATTCA
                      ____________________________________________________________
consensus             GATAAAGAAACAAGAGGGGCATTTCAACTAGGAAAAGAGACCTGGTTCTTCAACAATTCA
 
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JMSF023A13+           ACAATCATAGACAGATCAAGTCCCCTTATTGATGGCTCATAATCATGTAGAACCTCAAGT
                      ____________________________________________________________
consensus             ACAATCATAGACAGATCAAGTCCCCTTATTGATGGCTCATAATCATGTAGAACCTCAAGT
 
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JMSF023A13+           GCTACTGTCAAAATTTGATTAAAGTACTACGAAATAGCAAAGGTTACAGGTTGATTTACC
                      ____________________________________________________________
consensus             GCTACTGTCAAAATTTGATTAAAGTACTACGAAATAGCAAAGGTTACAGGTTGATTTACC
 
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JMSF023A13+           ATCCAAATGCATATGTTATCCATTTCTAAGTAAAAAGTAATAGTTAAATTAAAAATTGTA
                      ____________________________________________________________
consensus             ATCCAAATGCATATGTTATCCATTTCTAAGTAAAAAGTAATAGTTAAATTAAAAATTGTA
 
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JMSF023A13+           TATTAAAAACAATTTCTGCCACCAAAGAGAGGCCCGAGAGGATGTGAATTTAGTCAGAAG
                      ____________________________________________________________
consensus             TATTAAAAACAATTTCTGCCACCAAAGAGAGGCCCGAGAGGATGTGAATTTAGTCAGAAG
 
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JMSF023A13+           AAACATTTATCACAAATATTACCTAAAGAAATTTGTCATTAGAAATTGATCTGATTGTGT
                      ____________________________________________________________
consensus             AAACATTTATCACAAATATTACCTAAAGAAATTTGTCATTAGAAATTGATCTGATTGTGT
 
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JMSF001P12+                                                        TTCGACATAGATTGA
JMSF023A13+           GATGTTAAGCAGCCAGGATTGATTTTAATTAGCAATAATACCTTATTCGACATAGATTGA
                      ____________________________________________________________
consensus             GATGTTAAGCAGCCAGGATTGATTTTAATTAGCAATAATACCTTATTCGACATAGATTGA
 
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JMSF001P12+           TCATTAGCAACAGAAACTTCAACCAACTGTTGGAGTGCAACGTGCTTGTTTTCTGCCTCA
JMSF023A13+           TCATTAGCAACAGAAACTTCAACCAACTGTTGGAGTGCAACGTGCTTGTTTTCTGCCTCA
                      ____________________________________________________________
consensus             TCATTAGCAACAGAAACTTCAACCAACTGTTGGAGTGCAACGTGCTTGTTTTCTGCCTCA
 
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JMSF001P12+           GTCACCGAAGAAATCTAGAAACTCGAAGCCTCGTAGGTAGATCTAGGGTTTCCGGAGACG
JMSF023A13+           GTCACCGAAGAAATCTAGAAACTCGAAGCCTCGTAGGTAGATCTAGGGTTTCCGGAGACG
                      ____________________________________________________________
consensus             GTCACCGAAGAAATCTAGAAACTCGAAGCCTCGTAGGTAGATCTAGGGTTTCCGGAGACG
 
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JMSF001P12+           GAGACACGGCTGTGAGCGGCAGCCTCCGGAGAATCGGAGATGATGGCTTGGTGAAGTCGT
JMSF023A13+           GAGACACGGCTGTGAGCGGCAGCCTCCGGAGAATCGGAGATGATGGCTTGGTGAAGTCGT
                      ____________________________________________________________
consensus             GAGACACGGCTGTGAGCGGCAGCCTCCGGAGAATCGGAGATGATGGCTTGGTGAAGTCGT
 
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JMSF001P12+           GAGGAGTGGGACTATGGGAGAGATAAGCTGCGCCGATGAGGGCATGAGGCTGAATGCCTC
JMSF023A13+           GAGGAGTGGGACTATGGGAGAGATAAGCTGCGCCGATGAGGGCATGAGGCTGAATGCCTC
                      ____________________________________________________________
consensus             GAGGAGTGGGACTATGGGAGAGATAAGCTGCGCCGATGAGGGCATGAGGCTGAATGCCTC