Contig 002221:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF029D10+                                  CTTCTTAAGAGATGCAATGTAACACAAGAAAAATCAG
                      ____________________________________________________________
consensus                                    CTTCTTAAGAGATGCAATGTAACACAAGAAAAATCAG
 
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JMSF029D10+           AGCCCCTTCAATTCCATTTTCACCAGAAGTTAAAAGGCACAAAAACGAAAAGCACAAAAA
                      ____________________________________________________________
consensus             AGCCCCTTCAATTCCATTTTCACCAGAAGTTAAAAGGCACAAAAACGAAAAGCACAAAAA
 
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JMSF029D10+           ATGCAGAAGCCAAGCCTATGATTAAAATAGCGGAGGGCTGATGGTTCCATTTCACGAAGC
                      ____________________________________________________________
consensus             ATGCAGAAGCCAAGCCTATGATTAAAATAGCGGAGGGCTGATGGTTCCATTTCACGAAGC
 
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JMSF029D10+           AAAGAAGAAATGATAACAATAACCTCGTCTAAAAGGTGAAAAAGCAAAGTGTGGGGGCAA
                      ____________________________________________________________
consensus             AAAGAAGAAATGATAACAATAACCTCGTCTAAAAGGTGAAAAAGCAAAGTGTGGGGGCAA
 
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JMSF029D10+           ATGGTATTACTTCTCTCCTCGTTCCTGCTTGAAATATACCTAAATGGAGCATTTCCACCA
JMSF032M08+                                                     AATGGAGCATTTCCACCA
JMSF022F05+                                                               TTCCACCA
                      ____________________________________________________________
consensus             ATGGTATTACTTCTCTCCTCGTTCCTGCTTGAAATATACCTAAATGGAGCATTTCCACCA
 
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JMSF029D10+           GTATCGTTTCATCTAAAAATAAGTCCTTTTTCTATGGTTTGTCAATACCTCTGCACATAT
JMSF032M08+           GTATCGTTTCATCTAAAAATAAGTCCTTTTTCTATGGTTNGTCAATACCTCTGCACATAT
JMSF022F05+           GTATCGTTTCATCTAAAAATAAGTCCTTTTTCTATGGTTTGTCAATACCTCTGCACATAT
                      ____________________________________________________________
consensus             GTATCGTTTCATCTAAAAATAAGTCCTTTTTCTATGGTTTGTCAATACCTCTGCACATAT
 
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JMSF029D10+           CGTTACCCATCTGCAGAAACTTAAATGGATTTCATAAAAAAACTAAAATGGATTTCATAA
JMSF032M08+           CGTTACCCATCTGCAGAAACTTAAATGGATTTCATAAAAAAACTAAAATGGATTTCATAA
JMSF022F05+           CGTTACCCATCTGCAGAAACTTAAATGGATTTCATAAAAAAACTAAAATGGATTTCATAA
                      ____________________________________________________________
consensus             CGTTACCCATCTGCAGAAACTTAAATGGATTTCATAAAAAAACTAAAATGGATTTCATAA
 
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JMSF029D10+           AAAGAATTACCCGTTTACATATATCCCTATGGTTAGTTCAATCACACAAAGCCAAGAAAC
JMSF032M08+           AAAGAATTACCCGTTTACATATATCCCTATGGTTAGTTCAATCACACAAAGCCAAGAAAC
JMSF022F05+           AAAGAATTACCCGTTTACATATATCCCTATGGTTAGTTCAATCACACAAAGCCAAGAAAC
                      ____________________________________________________________
consensus             AAAGAATTACCCGTTTACATATATCCCTATGGTTAGTTCAATCACACAAAGCCAAGAAAC
 
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JMSF029D10+           AAAAACTTCTCAGCCAATCCGATTAGTCCCAGAAAAGCATTACAAAACCGAAAACCAAAA
JMSF032M08+           AAAAACTTCTCAGCCAATCCGATTAGTCCCAGAAAAGCATTACAAAACCGAAAACCAAAA
JMSF022F05+           AAAAACTTCTCAGCCAATCCGATTAGTCCCAGAAAAGCATTACAAAACCGAAAACCAAAA
                      ____________________________________________________________
consensus             AAAAACTTCTCAGCCAATCCGATTAGTCCCAGAAAAGCATTACAAAACCGAAAACCAAAA
 
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JMSF029D10+           AGTAATGATCAACATACTATGAACTCTCCATAATCAAATGAAAATCGCACCTCAAAAGAG
JMSF032M08+           AGTAATGATCAACATACTATGAACTCTCCATAATCAAATGAAAATCGCACCTCAAAAGAG
JMSF022F05+           AGTAATGATCAACATACTATGAACTCTCCATAATCAAATGAAAATCGCACCTCAAAAGAG
                      ____________________________________________________________
consensus             AGTAATGATCAACATACTATGAACTCTCCATAATCAAATGAAAATCGCACCTCAAAAGAG
 
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JMSF029D10+           CTACACAATACCAATAAATCCCTTGATCCTAACCAAAAGCCATAAATCATCACAGATACT
JMSF032M08+           CTACACAATACCAATAAATCCCTTGATCCTAACCAAAAGCCATAAATCATCACAGATACT
JMSF022F05+           CTACACAATACCAATAAATCCCTTGATCCTAACCAAAAGCCATAAATCATCACAGATACT
                      ____________________________________________________________
consensus             CTACACAATACCAATAAATCCCTTGATCCTAACCAAAAGCCATAAATCATCACAGATACT
 
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JMSF029D10+           GGGCCAAATTAACTCATTCAC                                       
JMSF032M08+           GGGCCAAATTAACTCATTCACAAAACCTAATATGAACAGTAGGCCAACAAAACTCTCCCA
JMSF022F05+           GGGCCAAATTAACTCATTCACAAAACCTAATATGAACAGTAGGCCAACAAAACTCTCCCA
                      ____________________________________________________________
consensus             GGGCCAAATTAACTCATTCACAAAACCTAATATGAACAGTAGGCCAACAAAACTCTCCCA
 
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JMSF032M08+           GTATGATGAACATGCATTACCAAGACTATCTAATAAAGCAATTAACACTTTAACAGTCCC
JMSF022F05+           GTATGATGAACATGCATTACCAAGACTATCTAATAAAGCAATTAACACTTTAACAGTCCC
                      ____________________________________________________________
consensus             GTATGATGAACATGCATTACCAAGACTATCTAATAAAGCAATTAACACTTTAACAGTCCC
 
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JMSF032M08+           CAGCAAAATTAGACCACAAGAAAACCTTAAAAGGTACCATCTTTGGGCTGAAACTGCAAA
JMSF022F05+           CAGCAAAATTAGACCACAAGAAAACCTTAAAAGGTACCATCTTTGGGCTGAAACTGCAAA
                      ____________________________________________________________
consensus             CAGCAAAATTAGACCACAAGAAAACCTTAAAAGGTACCATCTTTGGGCTGAAACTGCAAA
 
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JMSF032M08+           AAAGAAAGGATAAGGTAATAGACAGAAGATATAAGAACATAAACTGCTAGAAAAATCTGA
JMSF022F05+           AAAGAAAGGATAAGGTAATAGACAGAAGATATAAGAACATAAACTGCTAGAAAAATCTGA
                      ____________________________________________________________
consensus             AAAGAAAGGATAAGGTAATAGACAGAAGATATAAGAACATAAACTGCTAGAAAAATCTGA
 
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JMSF032M08+           AACCCCATGGTATCTCAAGCAATTCTTGATATGCTTTAACTACCTCATTCACTTCAGG  
JMSF022F05+           AACCCCATGGTATCTCAAGCAATTCTTGATATGCTTTAACTACCTCATTCACTTCAGGTC
                      ____________________________________________________________
consensus             AACCCCATGGTATCTCAAGCAATTCTTGATATGCTTTAACTACCTCATTCACTTCAGGTC