Contig 002221:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022F05Sequence668002221 (3)
JMSF029D10Sequence658002221 (3)809021490ref|XP_007218239.1|1e-22hypothetical protein PRUPE_ppa008009mg [Prunus persica] gb|EMJ19438.1| hypotheti
JMSF032M08Sequence678002221 (3)717024620

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF029D10+ CTTCTTAAGAGATGCAATGTAACACAAGAAAAATCAG
                      ____________________________________________________________
consensus CTTCTTAAGAGATGCAATGTAACACAAGAAAAATCAG
 
. : . : . : . : . : . :
JMSF029D10+ AGCCCCTTCAATTCCATTTTCACCAGAAGTTAAAAGGCACAAAAACGAAAAGCACAAAAA
                      ____________________________________________________________
consensus AGCCCCTTCAATTCCATTTTCACCAGAAGTTAAAAGGCACAAAAACGAAAAGCACAAAAA
 
. : . : . : . : . : . :
JMSF029D10+ ATGCAGAAGCCAAGCCTATGATTAAAATAGCGGAGGGCTGATGGTTCCATTTCACGAAGC
                      ____________________________________________________________
consensus ATGCAGAAGCCAAGCCTATGATTAAAATAGCGGAGGGCTGATGGTTCCATTTCACGAAGC
 
. : . : . : . : . : . :
JMSF029D10+ AAAGAAGAAATGATAACAATAACCTCGTCTAAAAGGTGAAAAAGCAAAGTGTGGGGGCAA
                      ____________________________________________________________
consensus AAAGAAGAAATGATAACAATAACCTCGTCTAAAAGGTGAAAAAGCAAAGTGTGGGGGCAA
 
. : . : . : . : . : . :
JMSF029D10+ ATGGTATTACTTCTCTCCTCGTTCCTGCTTGAAATATACCTAAATGGAGCATTTCCACCA
JMSF032M08+ AATGGAGCATTTCCACCA
JMSF022F05+ TTCCACCA
                      ____________________________________________________________
consensus ATGGTATTACTTCTCTCCTCGTTCCTGCTTGAAATATACCTAAATGGAGCATTTCCACCA
 
. : . : . : . : . : . :
JMSF029D10+ GTATCGTTTCATCTAAAAATAAGTCCTTTTTCTATGGTTTGTCAATACCTCTGCACATAT
JMSF032M08+ GTATCGTTTCATCTAAAAATAAGTCCTTTTTCTATGGTTNGTCAATACCTCTGCACATAT
JMSF022F05+ GTATCGTTTCATCTAAAAATAAGTCCTTTTTCTATGGTTTGTCAATACCTCTGCACATAT
                      ____________________________________________________________
consensus GTATCGTTTCATCTAAAAATAAGTCCTTTTTCTATGGTTTGTCAATACCTCTGCACATAT
 
. : . : . : . : . : . :
JMSF029D10+ CGTTACCCATCTGCAGAAACTTAAATGGATTTCATAAAAAAACTAAAATGGATTTCATAA
JMSF032M08+ CGTTACCCATCTGCAGAAACTTAAATGGATTTCATAAAAAAACTAAAATGGATTTCATAA
JMSF022F05+ CGTTACCCATCTGCAGAAACTTAAATGGATTTCATAAAAAAACTAAAATGGATTTCATAA
                      ____________________________________________________________
consensus CGTTACCCATCTGCAGAAACTTAAATGGATTTCATAAAAAAACTAAAATGGATTTCATAA
 
. : . : . : . : . : . :
JMSF029D10+ AAAGAATTACCCGTTTACATATATCCCTATGGTTAGTTCAATCACACAAAGCCAAGAAAC
JMSF032M08+ AAAGAATTACCCGTTTACATATATCCCTATGGTTAGTTCAATCACACAAAGCCAAGAAAC
JMSF022F05+ AAAGAATTACCCGTTTACATATATCCCTATGGTTAGTTCAATCACACAAAGCCAAGAAAC
                      ____________________________________________________________
consensus AAAGAATTACCCGTTTACATATATCCCTATGGTTAGTTCAATCACACAAAGCCAAGAAAC
 
. : . : . : . : . : . :
JMSF029D10+ AAAAACTTCTCAGCCAATCCGATTAGTCCCAGAAAAGCATTACAAAACCGAAAACCAAAA
JMSF032M08+ AAAAACTTCTCAGCCAATCCGATTAGTCCCAGAAAAGCATTACAAAACCGAAAACCAAAA
JMSF022F05+ AAAAACTTCTCAGCCAATCCGATTAGTCCCAGAAAAGCATTACAAAACCGAAAACCAAAA
                      ____________________________________________________________
consensus AAAAACTTCTCAGCCAATCCGATTAGTCCCAGAAAAGCATTACAAAACCGAAAACCAAAA
 
. : . : . : . : . : . :
JMSF029D10+ AGTAATGATCAACATACTATGAACTCTCCATAATCAAATGAAAATCGCACCTCAAAAGAG
JMSF032M08+ AGTAATGATCAACATACTATGAACTCTCCATAATCAAATGAAAATCGCACCTCAAAAGAG
JMSF022F05+ AGTAATGATCAACATACTATGAACTCTCCATAATCAAATGAAAATCGCACCTCAAAAGAG
                      ____________________________________________________________
consensus AGTAATGATCAACATACTATGAACTCTCCATAATCAAATGAAAATCGCACCTCAAAAGAG
 
. : . : . : . : . : . :
JMSF029D10+ CTACACAATACCAATAAATCCCTTGATCCTAACCAAAAGCCATAAATCATCACAGATACT
JMSF032M08+ CTACACAATACCAATAAATCCCTTGATCCTAACCAAAAGCCATAAATCATCACAGATACT
JMSF022F05+ CTACACAATACCAATAAATCCCTTGATCCTAACCAAAAGCCATAAATCATCACAGATACT
                      ____________________________________________________________
consensus CTACACAATACCAATAAATCCCTTGATCCTAACCAAAAGCCATAAATCATCACAGATACT
 
. : . : . : . : . : . :
JMSF029D10+ GGGCCAAATTAACTCATTCAC
JMSF032M08+ GGGCCAAATTAACTCATTCACAAAACCTAATATGAACAGTAGGCCAACAAAACTCTCCCA
JMSF022F05+ GGGCCAAATTAACTCATTCACAAAACCTAATATGAACAGTAGGCCAACAAAACTCTCCCA
                      ____________________________________________________________
consensus GGGCCAAATTAACTCATTCACAAAACCTAATATGAACAGTAGGCCAACAAAACTCTCCCA
 
. : . : . : . : . : . :
JMSF032M08+ GTATGATGAACATGCATTACCAAGACTATCTAATAAAGCAATTAACACTTTAACAGTCCC
JMSF022F05+ GTATGATGAACATGCATTACCAAGACTATCTAATAAAGCAATTAACACTTTAACAGTCCC
                      ____________________________________________________________
consensus GTATGATGAACATGCATTACCAAGACTATCTAATAAAGCAATTAACACTTTAACAGTCCC
 
. : . : . : . : . : . :
JMSF032M08+ CAGCAAAATTAGACCACAAGAAAACCTTAAAAGGTACCATCTTTGGGCTGAAACTGCAAA
JMSF022F05+ CAGCAAAATTAGACCACAAGAAAACCTTAAAAGGTACCATCTTTGGGCTGAAACTGCAAA
                      ____________________________________________________________
consensus CAGCAAAATTAGACCACAAGAAAACCTTAAAAGGTACCATCTTTGGGCTGAAACTGCAAA
 
. : . : . : . : . : . :
JMSF032M08+ AAAGAAAGGATAAGGTAATAGACAGAAGATATAAGAACATAAACTGCTAGAAAAATCTGA
JMSF022F05+ AAAGAAAGGATAAGGTAATAGACAGAAGATATAAGAACATAAACTGCTAGAAAAATCTGA
                      ____________________________________________________________
consensus AAAGAAAGGATAAGGTAATAGACAGAAGATATAAGAACATAAACTGCTAGAAAAATCTGA
 
. : . : . : . : . : . :
JMSF032M08+ AACCCCATGGTATCTCAAGCAATTCTTGATATGCTTTAACTACCTCATTCACTTCAGG
JMSF022F05+ AACCCCATGGTATCTCAAGCAATTCTTGATATGCTTTAACTACCTCATTCACTTCAGGTC
                      ____________________________________________________________
consensus AACCCCATGGTATCTCAAGCAATTCTTGATATGCTTTAACTACCTCATTCACTTCAGGTC