Contig 002218:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033N05Sequence547002218 (8)ref|XP_009616512.1|6e-61PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| 772008265 (7)ref|XP_011101473.1|2e-112PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI
JMFS022E01Sequence582002218 (8)ref|XP_009616512.1|2e-72PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1|
JMSF007M20Sequence281002218 (8)735008265 (7)ref|XP_006362822.1|1e-109PREDICTED: histidine decarboxylase-like isoform X1 [Solanum tuberosum] ref|XP_00
JMSF021N21Sequence640002218 (8)ref|XP_009616512.1|2e-47PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| 741008265 (7)ref|XP_011101473.1|4e-111PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI
JMSF022N08Sequence669002218 (8)ref|XP_009616512.1|2e-91PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| 732008265 (7)ref|XP_011101473.1|6e-109PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI
JMSF029M02Sequence659002218 (8)ref|XP_009616512.1|7e-91PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| 682008265 (7)ref|XP_011101473.1|8e-95PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI
JMSF043C18Sequence781002218 (8)ref|XP_009616512.1|1e-92PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| 808008265 (7)ref|XP_011101473.1|3e-117PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI
JMSF045A01Sequence747002218 (8)ref|XP_009616512.1|2e-113PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| 844008265 (7)ref|XP_004237774.1|4e-117PREDICTED: serine decarboxylase [Solanum lycopersicum] ref|XP_010320069.1| PREDI

Alignment

This contig is upended


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JMSF045A01+               CTATACATTCGTGCAGCTTTAAACACTGAATAGTGTGACTCTCTTGAAGCATACAA
                      ____________________________________________________________
consensus                 CTATACATTCGTGCAGCTTTAAACACTGAATAGTGTGACTCTCTTGAAGCATACAA
 
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JMSF043C18+                                   CCCAACAAGGATTCCATGAAGATTCCCCTCAGTCCC
JMSF022N08+                                           GGATTCCATGAAGATTCCCNTCAGTCCC
JMSF045A01+           AATTCCATCAGGAAAGACTTCTCTCCCAACAAGGATTCCATGAAGATTCCCCTCAGTCCC
JMSF029M02+                                           GGATTCCATGAAGATTCCCNTCAGTCCC
                      ____________________________________________________________
consensus             AATTCCATCAGGAAAGACTTCTCTCCCAACAAGGATTCCATGAAGATTCCCCTCAGTCCC
 
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JMFS022E01+                                                        CAAACGGGCAAACCA
JMSF043C18+           ACAGTTTGTAATATAACCCCAGTATTCATCTTTTTCAATGTCCCACAAACGGGCAAACCA
JMSF022N08+           ACAGTTTGTAATATAACCCCAGTATTCATCTTTTTCAATGTCCCACAAACGGGCAAACCA
JMSF045A01+           ACAGTTTGTAATATAACCCCAGTATTCATCTTTTTCAATGTCCCACAAACGGGCAAACCA
JMSF029M02+           ACAGTTTGTAATATAACCCCAGTATTCATCTTTTTCAATGTCCCACAAACGGGCAAACCA
                      ____________________________________________________________
consensus             ACAGTTTGTAATATAACCCCAGTATTCATCTTTTTCAATGTCCCACAAACGGGCAAACCA
 
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JMFS022E01+           ATCTAAAACACCCACTTCAAACTGCCTTGAGTGGACACCATAGTTGCTCTCAATAAATGG
JMSF043C18+           ATCTAAAACACCCACTTCAAACTGCCTTGAGTGGACACCATAGTTGCTCTCAATAAATGG
JMSF022N08+           ATCTAAAACACCCACTTCAAACTGCCTTGAGTGGACACCATAGTTGCTCTCAATAAATGG
JMSF045A01+           ATCTAAAACACCCACTTCAAACTGCCTTGAGTGGACACCATAGTTGCTCTCAATAAATGG
JMSF029M02+           ATCTAAAACACCCACTTCAAACTGCCTTGAGTGGACACCATAGTTGCTCTCAATAAATGG
JMFF033N05+                                     TTGAGTGGACACCATAGTTGCTCTCAATAAATGG
JMSF021N21+                      CCACTTCAAACTGCCTTGAGTGGACACCATAGTTGCTCTCAATAAATGG
                      ____________________________________________________________
consensus             ATCTAAAACACCCACTTCAAACTGCCTTGAGTGGACACCATAGTTGCTCTCAATAAATGG
 
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JMFS022E01+           ATCACCAAGGTTATTAATGGAGAAATGCTGCAACTGTGAAAGATCTCCATAATCAAAATC
JMSF043C18+           ATCACCAAGGTTATTAATGGAGAAATGCTGCAACTGTGAAAGATCTCCATAATCAAAATC
JMSF022N08+           ATCACCAAGGTTATTAATGGAGAAATGCTGCAACTGTGAAAGATCTCCATAATCAAAATC
JMSF045A01+           ATCACCAAGGTTATTAATGGAGAAATGCTGCAACTGTGAAAGATCTCCATAATCAAAATC
JMSF029M02+           ATCACCAAGGTTATTAATGGAGAAATGCTGCAACTGTGAAAGATCTCCATAATCAAAATC
JMFF033N05+           ATCACCAAGGTTATTAATGGAGAAATGCTGCAACTGTGAAAGATCTCCATAATCAAAATC
JMSF021N21+           ATCACCAAGGTTATTAATGGAGAAATGCTGCAACTGTGAAAGATCTCCATAATCAAAATC
                      ____________________________________________________________
consensus             ATCACCAAGGTTATTAATGGAGAAATGCTGCAACTGTGAAAGATCTCCATAATCAAAATC
 
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JMFS022E01+           CAGATTGTATGGATACCCTAGATGATACTTGGTCCGCTCGACAAGAGTCTTACGGTAACG
JMSF043C18+           CAGATTGTATGGATACCCTAGATGATACTTGGTCCGCTCGACAAGAGTCTTACGGTAACG
JMSF022N08+           CAGATTGTATGGATACCCTAGATGATACTTGGTCCGCTCGACAAGAGTCTTACGGTAACG
JMSF045A01+           CAGATTGTATGGATACCCTAGATGATACTTGGTCCGCTCGACAAGAGTCTTACGGTAACG
JMSF029M02+           CAGATTGTATGGATACCCTAGATGATACTTGGTCCGCTCGACAAGAGTCTTACGGTAACG
JMFF033N05+           CAGATTGTATGGATACCCTAGATGATACTTGGTCCGCTCGACAAGAGTCTTACGGTAACG
JMSF021N21+           CAGATT-TATGGATACCCTAGATGATACTTGGTCCGCTCGACAAGAGTCTTACGGTAACG
                      ____________________________________________________________
consensus             CAGATTGTATGGATACCCTAGATGATACTTGGTCCGCTCGACAAGAGTCTTACGGTAACG
 
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JMFS022E01+           AGCCAAGACGCTAGCCATGTAGGCCTCCTTATCTCCAGTGGATTCGTTGTCGGCATCAGG
JMSF043C18+           AGCCAAGACGCTAGCCATGTAGGCCTCCTTATCTCCAGTGGATTCGTTGTCGGCATCAGG
JMSF022N08+           AGCCAAGACGCTAGCCATGTAGGCCTCCTTATCTCCAGTGGATTCGTTGTCGGCATCAGG
JMSF045A01+           AGCCAAGACGCTAGCCATGTAGGCCTCCTTATCTCCAGTGGATTCGTTGTCGGCATCAGG
JMSF029M02+           AGCCAAGACGCTAGCCATGTAGGCCTCCTTATCTCCAGTGGATTCGTTGTCGGCATCAGG
JMFF033N05+           AGCCAAGACGCTAGCCATGTAGGCCTCCTTATCTCCAGTGGATTCGTTGTCGGCATCAGG
JMSF021N21+           AGCCAAGACGCTAGCCATGTAGGCCTCCTTATCTCCAGTGGATTCGTTGTCGGCATCAGG
                      ____________________________________________________________
consensus             AGCCAAGACGCTAGCCATGTAGGCCTCCTTATCTCCAGTGGATTCGTTGTCGGCATCAGG
 
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JMFS022E01+           CTCCGTGACCTCCAAGCACGTGGTGTGCACGTTCCGCCCCAACACTATCTCCCTCTTATC
JMSF043C18+           CTCCGTGACCTCCAAGCACGTGGTGTGCACGTTCCGCCCCAACACTATCTCCCTCTTATC
JMSF022N08+           CTCCGTGACCTCCAAGCACGTGGTGTGCACGTTCCGCCCCAACACTATCTCCCTCTTATC
JMSF007M20+                                                                 CTTATC
JMSF045A01+           CTCCGTGACCTCCAAGCACGTGGTGTGCACGTTCCGCCCCAACACTATCTCCCTCTTATC
JMSF029M02+           CTCCGTGACCTCCAAGCACGTGGTGTGCACGTTCCGCCCCAACACTATCTCCCTCTTATC
JMFF033N05+           CTCCGTGACCTCCAAGCACGTGGTGTGCACGTTCCGCCCCAACACTATCTCCCTCTTATC
JMSF021N21+           CTCCGTGACCTCCAAGCACGTGGTGTGCACGTTCCGCCCCAACACTATCTCCCTNTTATC
                      ____________________________________________________________
consensus             CTCCGTGACCTCCAAGCACGTGGTGTGCACGTTCCGCCCCAACACTATCTCCCTCTTATC
 
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JMFS022E01+           CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
JMSF043C18+           CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
JMSF022N08+           CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
JMSF007M20+           CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
JMSF045A01+           CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
JMSF029M02+           CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
JMFF033N05+           CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
JMSF021N21+           CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
                      ____________________________________________________________
consensus             CGCCTTCCCTCCATTGGCCGCAGGGGGCGAATCCAGTTTGTCCGATTGCACCGGAGGAGG
 
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JMFS022E01+           CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCGAAAAGCTCAGCCGC
JMSF043C18+           CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCCAAAAGCTCAGCCGC
JMSF022N08+           CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCGAAAAGCTCAGCCGC
JMSF007M20+           CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCGAAAAGCTCAGCCGC
JMSF045A01+           CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCGAAAAGCTCAGCCGC
JMSF029M02+           CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCGAAAAGCTCAGCCGC
JMFF033N05+           CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCGAAAAACTCAGCCGC
JMSF021N21+           CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCGAAAAGCTCAGCCGC
                      ____________________________________________________________
consensus             CACCGGCTCCGTCACAATAGCCGTCGGATTAAACCGACCGTCAGCGAAAAGCTCAGCCGC
 
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JMFS022E01+           CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTG--
JMSF043C18+           CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTG  
JMSF022N08+           CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTG  
JMSF007M20+           CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTGTT
JMSF045A01+           CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTG--
JMSF029M02+           CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTG--
JMFF033N05+           CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTG--
JMSF021N21+           CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTG--
                      ____________________________________________________________
consensus             CGCCGCCGCTGCCGCCGCATTCCCGTTGGGAAGAACCGCGCTAAGCATCTTCGCGCTG--
 
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JMFS022E01+           ------AAATTGAGCGAGTGTGTAGGAGAAAAAGCAGTGGAGTGATTGGGCTGTGTGAAT
JMSF007M20+           CACCTGAAATTGAGCGAGTGTGTAGGAGAAAAAGCAGTGGAGTGATTGGGCTGTGTGAAT
JMSF045A01+           ------AAATTGAGCGAGTGTGTAGGAGAAAAAGCAGTGGAGTGATTGGGCTGTGTGAAT
JMSF029M02+           ------AAATTGAGCGAGTGTGTAGGAGAAAAAGCAGTGGAGTGATTGGGCTGTGTGAAT
JMFF033N05+           ------AAATTGAGCGAGTGTGTAGGAGAAAAAGCAGTGGAGTGATTGGGCTGTGTGAAT
JMSF021N21+           ------AAATTGAGCGAGTGTGTAGGAGAAAAAGCAGTGGAGTGATTGGGCTGTGTGAAT
                      ____________________________________________________________
consensus             ------AAATTGAGCGAGTGTGTAGGAGAAAAAGCAGTGGAGTGATTGGGCTGTGTGAAT
 
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JMFS022E01+           GGGCGAAAGAATTGGAGAAATGTAGAGGATGACAA                         
JMSF007M20+           GGGCGAAAGAATTGGAGAAATGTAGAGGATGAC                           
JMSF045A01+           GGGCGAAAGAATTGGAGAAATGTAGAGGATGACAATA                       
JMSF029M02+           GGGCGAAAGAATTGGAGAAATGTAGAGGATGACAATAC                      
JMFF033N05+           GGGCGAAAGAATTGGAGAAATGTAGAGGATGACAATAC                      
JMSF021N21+           GGGCGAAAGAATTGGAGAAATGTAGAGGATGACAATACACTACCGTGACGCTGCGCTCGT
                      ____________________________________________________________
consensus             GGGCGAAAGAATTGGAGAAATGTAGAGGATGACAATACACTACCGTGACGCTGCGCTCGT
 
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JMSF021N21+           GTATGTATATATGTATATAGACCAATTGCAGTTGATGAATTGATTAGTTAGGCCCCTTCC
                      ____________________________________________________________
consensus             GTATGTATATATGTATATAGACCAATTGCAGTTGATGAATTGATTAGTTAGGCCCCTTCC