Contig 002216:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010O11Sequence247002216 (3)744006245 (6)ref|XP_008343230.1|1e-57PREDICTED: paladin-like [Malus domestica]
JMSF021M03Sequence695002216 (3)gb|KJB24501.1|1e-60hypothetical protein B456_004G148300 [Gossypium raimondii]775006245 (6)ref|XP_008343230.1|3e-58PREDICTED: paladin-like [Malus domestica]
JMSF027I05Sequence644002216 (3)gb|KJB24504.1|5e-51hypothetical protein B456_004G148300 [Gossypium raimondii]748006245 (6)ref|XP_008343230.1|6e-59PREDICTED: paladin-like [Malus domestica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021M03+ GCGAAGTAGGGTGAAGTGCATCTCGTTCTGTGTGG
                      ____________________________________________________________
consensus GCGAAGTAGGGTGAAGTGCATCTCGTTCTGTGTGG
 
. : . : . : . : . : . :
JMSF027I05+ AAATAAGGAACTAATATCTTTCCAAATACTCCACAAAAAAGGAA
JMSF021M03+ AGATATACAGCAAAACAAATAAGGAACTAATATCTTTCCAAATACTCCACAAAAAAGGAA
                      ____________________________________________________________
consensus AGATATACAGCAAAACAAATAAGGAACTAATATCTTTCCAAATACTCCACAAAAAAGGAA
 
. : . : . : . : . : . :
JMSF027I05+ AGTGCTGCTTCCCTCTTCATCTCATCAGGCTGACGTAAAATGCTGTTCCGATAAGTAGCA
JMSF021M03+ AGTGCTGCTTCCCTCTTCATCTCATCAGGCTGACGTAAAATGCTGTTCCGATAAGTAGCA
                      ____________________________________________________________
consensus AGTGCTGCTTCCCTCTTCATCTCATCAGGCTGACGTAAAATGCTGTTCCGATAAGTAGCA
 
. : . : . : . : . : . :
JMSF027I05+ ATAGCTTCACGTAGGTTCTGCATTGAGGCACATCTGTCAATGACTTTATCCACTTGTTTT
JMSF021M03+ ATAGCTTCACGTAGGTTCTGCATTGAGGCACATCTGTCAATGACTTTATCCACTTGTTTT
                      ____________________________________________________________
consensus ATAGCTTCACGTAGGTTCTGCATTGAGGCACATCTGTCAATGACTTTATCCACTTGTTTT
 
. : . : . : . : . : . :
JMSF027I05+ TTGCCTTCAACGCCACCCTCCAAAACTCGAATCAAGCTTCTAATAACTGTATATTCTCCT
JMSF021M03+ TTGCCTTCAACGCCACCCTCCAAAACTCGAATCAAGCTTCTAATAACTGTATATTCTCCT
                      ____________________________________________________________
consensus TTGCCTTCAACGCCACCCTCCAAAACTCGAATCAAGCTTCTAATAACTGTATATTCTCCT
 
. : . : . : . : . : . :
JMSF027I05+ CTACGAATTGCATCCTCTGAGTTGGGCATAATATCAGTAGCATTGGCACCACAACTGGAA
JMSF021M03+ CTACGAATTGCATCCTCTGAGTTGGGCATAATATCAGTAGCATTGGCACCACAACTGGAA
                      ____________________________________________________________
consensus CTACGAATTGCATCCTCTGAGTTGGGCATAATATCAGTAGCATTGGCACCACAACTGGAA
 
. : . : . : . : . : . :
JMSF027I05+ ACTCTGCCAATTGAATTTGTCCTTGGAATTCCGGAAACTGATCTGCTCTGCCCTCGACGC
JMSF021M03+ ACTCTGCCAATTGAATTTGTCCTTGGAATTCCGGAAACTGATCTGCTCTGCCCTCGACGC
                      ____________________________________________________________
consensus ACTCTGCCAATTGAATTTGTCCTTGGAATTCCGGAAACTGATCTGCTCTGCCCTCGACGC
 
. : . : . : . : . : . :
JMSF027I05+ CGCCTACTGCTTCGCCGGAGCTCGCCGATGAAGACCGCCGCTGCTGCGGCCGACGGAAAG
JMSF021M03+ CGCCTACTGCTTCGCCGGAGCTCGCCGATGAAGACCGCCGCTGCTGCGGCCGACGGAAAG
                      ____________________________________________________________
consensus CGCCTACTGCTTCGCCGGAGCTCGCCGATGAAGACCGCCGCTGCTGCGGCCGACGGAAAG
 
. : . : . : . : . : . :
JMSF027I05+ AATAGAGGAGAGAAGGAGGCCCGGACGTTCAAGCTGCCCTCAGCTCGCCGGAAGGAGTCA
JMSF010O11+ GACGTTCAAGCTGCCCTCAGCTCGCCGGAAGGAGTCA
JMSF021M03+ AATAGAGGAGAGAAGGAGGCCCGGACGTTCAAGCTGCCCTCAGCTCGCCGGAAGGAGTCA
                      ____________________________________________________________
consensus AATAGAGGAGAGAAGGAGGCCCGGACGTTCAAGCTGCCCTCAGCTCGCCGGAAGGAGTCA
 
. : . : . : . : . : . :
JMSF027I05+ GAACTGAATGCTCCGTAGCTTCTTCGCGCCACTGGTTCGTCGCGTATGTGCAATCTCGCT
JMSF010O11+ GAACTGAATGCTCCGTAGCTTCTTCGCGCCACTGGTTCGTCGCGTATGTGC
JMSF021M03+ GAACTGAATGCTCCGTAGCTTCTTCGCGCCACTGGTTCGTCGCGTATGTGCAATCTCGCT
                      ____________________________________________________________
consensus GAACTGAATGCTCCGTAGCTTCTTCGCGCCACTGGTTCGTCGCGTATGTGCAATCTCGCT
 
. : . : . : . : . : . :
JMSF027I05+ GGCCGGGAAAAGGAAAGCGGCTGATAACAGTGGTGGGTGGTCGCTGGTGGAGGCTGATGC
JMSF021M03+ GGCCGGGAAAAGGAAAGCGGCTGATAACAGTGGTGGGTGGTCGCTGGTGGAGGCTGATGC
                      ____________________________________________________________
consensus GGCCGGGAAAAGGAAAGCGGCTGATAACAGTGGTGGGTGGTCGCTGGTGGAGGCTGATGC
 
. : . : . : . : . : . :
JMSF027I05+ TCACTGCGGTCGACGAAGAAGAAGGTGTCGATGGTGATGGTGGCGGCGGCTGTT
JMSF021M03+ TCACTGCGGTCGACGAAGAAGAAGGTGTCGATGGTGATGGTGGCGGCGGCTGTTATCTTC
                      ____________________________________________________________
consensus TCACTGCGGTCGACGAAGAAGAAGGTGTCGATGGTGATGGTGGCGGCGGCTGTTATCTTC